Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI52965 Sapria himalayana HOM05D000849 ORTHO05D003989 2.8e-35 151.4 74 100.0
SHI20141 Sapria himalayana HOM05D000849 ORTHO05D003989 5.3e-26 120.6 74 82.4
SHI34978 Sapria himalayana HOM05D000849 ORTHO05D003989 1.0e-21 106.3 71 74.6
SHI33597 Sapria himalayana HOM05D000849 ORTHO05D003989 5.1e-21 104.0 63 81.0
SHI13831 Sapria himalayana HOM05D000849 ORTHO05D003989 8.7e-21 103.2 55 87.3
SHI47843 Sapria himalayana HOM05D000849 ORTHO05D003989 3.3e-20 101.3 71 70.4
SHI29266 Sapria himalayana HOM05D000849 ORTHO05D003989 2.8e-19 98.2 55 83.6
SHI07245 Sapria himalayana HOM05D000849 ORTHO05D370801 7.6e-17 90.1 55 78.2
SHI51872 Sapria himalayana HOM05D000849 ORTHO05D003989 4.2e-15 84.3 51 80.4
SHI48305 Sapria himalayana HOM05D000849 ORTHO05D003989 7.1e-15 83.6 50 80.0
Migut.J01079 Erythranthe guttata HOM05D000849 ORTHO05D003989 1.5e-12 75.9 68 60.3
Duzib150G0327 Durio zibethinus HOM05D000849 ORTHO05D003989 7.4e-12 73.6 68 57.4
Duzib187G0631 Durio zibethinus HOM05D000849 ORTHO05D003989 7.4e-12 73.6 68 57.4
Gohir.A13G194600 Gossypium hirsutum HOM05D000849 ORTHO05D003989 7.4e-12 73.6 68 57.4
Gohir.D13G200300 Gossypium hirsutum HOM05D000849 ORTHO05D003989 7.4e-12 73.6 68 57.4
Gorai.013G229100 Gossypium raimondii HOM05D000849 ORTHO05D003989 7.4e-12 73.6 68 57.4
SHI49175 Sapria himalayana HOM05D000849 ORTHO05D003989 7.4e-12 73.6 46 78.3
Thecc.09G096900 Theobroma cacao HOM05D000849 ORTHO05D003989 7.4e-12 73.6 68 57.4
Atru.chr7.1508 Acer truncatum HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
Ah.09g230330 Amaranthus hybridus HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
ATR0705G079 Amborella trichopoda HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
arahy.Tifrunner.gnm1.ann1.URAI8Z Arachis hypogaea HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
arahy.Tifrunner.gnm1.ann1.XR2T8G Arachis hypogaea HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
MSTRG.19541 Avicennia marina HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
EL10Ac8g18347 Beta vulgaris HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
CSS0012070 Camellia sinensis var. sinensis HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
CANSAT56G1795 Cannabis sativa HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
CAN.G1058.10 Capsicum annuum HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
Cpa.g.sc78.44 Carica papaya HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
CiPaw.03G221100 Carya illinoinensis HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
CiPaw.04G154300 Carya illinoinensis HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
CDE05G2264 Ceratophyllum demersum HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
CDE05G3423 Ceratophyllum demersum HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
AUR62021360 Chenopodium quinoa HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
AUR62033272 Chenopodium quinoa HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
ClCG03G015970 Citrullus lanatus HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
Ciclev10009831m.g Citrus clementina HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
Cc06_g10770 Coffea canephora HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
Haze_25852 Corylus avellana HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
MELO3C015429.2 Cucumis melo HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
CsaV3_1G039990 Cucumis sativus L. HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
DCAR_028635 Daucus carota HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
Dinv42272 Davidia involucrata HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
ECA236G3815 Erigeron canadensis HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
Migut.K00562 Erythranthe guttata HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
Eucgr.C00951 Eucalyptus grandis HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
FvH4_1g06580 Fragaria vesca HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
FAN19G1758 Fragaria x ananassa HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
FAN26G0314 Fragaria x ananassa HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
FAN26G0318 Fragaria x ananassa HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
FAN28G0398 Fragaria x ananassa HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
Glyma.01G005300 Glycine max HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
Glyma.07G126300 Glycine max HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
Gohir.D05G029100 Gossypium hirsutum HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
HanXRQChr09g0238561 Helianthus annuus HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
Hma1.2p1_0663F.1_g198540 Hydrangea macrophylla HOM05D000849 ORTHO05D003989 1.3e-11 72.8 68 57.4
Lsat_1_v5_gn_8_88280 Lactuca sativa HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
Lj2g0010400 Lotus japonicus HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
Lalb_Chr14g0375221 Lupinus albus HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
MBI04_g06989_MAGBIO Magnolia biondii HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
MD02G1069000 Malus domestica HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
MD15G1200600 Malus domestica HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
Manes.03G029400 Manihot esculenta HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
Nn8g39010 Nelumbo nucifera HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
Nitab4.5_0004180g0010 Nicotiana tabacum HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
Peaxi162Scf00298g00114 Petunia axillaris HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
Phvul.004G173800 Phaseolus vulgaris HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
Potri.006G149100 Populus trichocarpa HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
Prupe.7G216600 Prunus persica HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
PGR142G0605 Punica granatum HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
QL02p086970 Quercus lobata HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
Rhsim03G0235600 Rhododendron simsii HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
RcHm_v2.0_Chr2g0092321 Rosa chinensis HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
Sabra06G0117900 Salix brachista HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
Sed0020746 Sechium edule HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
Hund26299 Selenicereus undatus HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
Sc08g0008140 Simmondsia chinensis HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
Solyc05g026130.3 Solanum lycopersicum HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
Sopen05g022340 Solanum pennellii HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
PGSC0003DMG400028942 Solanum tuberosum HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
SGA_v2.0_scaffold279G46782 Striga asiatica HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
SGA_v2.0_scaffold302G47808 Striga asiatica HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
THA.LOC104820037 Tarenaya hassleriana HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
TWI63G0367 Tripterygium wilfordii HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
TAR636G1139 Trochodendron aralioides HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
unitig_26.g9704 Utricularia gibba HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
vmacro06264 Vaccinium macrocarpon HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
HPP92_024117 Vanilla planifolia HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
VMungo0464G2126 Vigna mungo HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
GSVIVG01015270001 Vitis vinifera HOM05D000849 ORTHO05D003989 1.3e-11 72.8 67 58.2
Aa31LG8G16770 Aethionema arabicum HOM05D000849 ORTHO05D003989 1.6e-11 72.4 67 58.2
AL3G48440 Arabidopsis lyrata HOM05D000849 ORTHO05D003989 1.6e-11 72.4 67 58.2
AT2G19790 Arabidopsis thaliana HOM05D000849 ORTHO05D003989 1.6e-11 72.4 67 58.2
BcaB03g16769 Brassica carinata HOM05D000849 ORTHO05D003989 1.6e-11 72.4 67 58.2
BcaC04g22820 Brassica carinata HOM05D000849 ORTHO05D003989 1.6e-11 72.4 67 58.2
BcaC06g36622 Brassica carinata HOM05D000849 ORTHO05D003989 1.6e-11 72.4 67 58.2
A07p00920 Brassica napus HOM05D000849 ORTHO05D003989 1.6e-11 72.4 67 58.2
A09p12580 Brassica napus HOM05D000849 ORTHO05D003989 1.6e-11 72.4 67 58.2
C07p02080 Brassica napus HOM05D000849 ORTHO05D003989 1.6e-11 72.4 67 58.2
C09p14940 Brassica napus HOM05D000849 ORTHO05D003989 1.6e-11 72.4 67 58.2
BolC7t40613H Brassica oleracea HOM05D000849 ORTHO05D003989 1.6e-11 72.4 67 58.2
BolC9t54396H Brassica oleracea HOM05D000849 ORTHO05D003989 1.6e-11 72.4 67 58.2
BraA07t27892Z Brassica rapa HOM05D000849 ORTHO05D003989 1.6e-11 72.4 67 58.2
BraA09t36905Z Brassica rapa HOM05D000849 ORTHO05D003989 1.6e-11 72.4 67 58.2
Carub.0003s3407 Capsella rubella HOM05D000849 ORTHO05D003989 1.6e-11 72.4 67 58.2
CARHR110250 Cardamine hirsuta HOM05D000849 ORTHO05D003989 1.6e-11 72.4 67 58.2
Thhalv10002117m.g Eutrema salsugineum HOM05D000849 ORTHO05D003989 1.6e-11 72.4 67 58.2
Oeu036246.1 Olea europaea HOM05D000849 ORTHO05D003989 1.6e-11 72.4 67 56.7
PSO063G4962 Papaver somniferum HOM05D000849 ORTHO05D003989 1.6e-11 72.4 67 58.2
PSO782G5042 Papaver somniferum HOM05D000849 ORTHO05D003989 1.6e-11 72.4 67 58.2
SalBow6G5864 Salvia bowleyana HOM05D000849 ORTHO05D003989 1.6e-11 72.4 66 59.1
Sp3g33140 Schrenkiella parvula HOM05D000849 ORTHO05D003989 1.6e-11 72.4 67 58.2
Actinidia17501 Actinidia chinensis HOM05D000849 ORTHO05D003989 2.8e-11 71.6 67 56.7
Manes.16G106500 Manihot esculenta HOM05D000849 ORTHO05D003989 2.8e-11 71.6 67 56.7
SEGI_24636 Sequoiadendron giganteum HOM05D000849 ORTHO05D003989 2.8e-11 71.6 67 56.7
Ca_17379_v3 Cicer arietinum L. HOM05D000849 ORTHO05D003989 3.7e-11 71.2 67 56.7
Lj4g0006741 Lotus japonicus HOM05D000849 ORTHO05D003989 3.7e-11 71.2 67 56.7
Medtr7g100010 Medicago truncatula HOM05D000849 ORTHO05D003989 3.7e-11 71.2 67 56.7
Medtr8g102180 Medicago truncatula HOM05D000849 ORTHO05D003989 3.7e-11 71.2 67 56.7
Os10g0368400 Oryza sativa ssp. japonica HOM05D000849 ORTHO05D003989 3.7e-11 71.2 67 56.7
PSO210G7720 Papaver somniferum HOM05D000849 ORTHO05D003989 3.7e-11 71.2 67 56.7
PSO832G0835 Papaver somniferum HOM05D000849 ORTHO05D003989 3.7e-11 71.2 67 56.7
Phvul.002G306700 Phaseolus vulgaris HOM05D000849 ORTHO05D003989 3.7e-11 71.2 67 56.7
Psat7g018560 Pisum sativum HOM05D000849 ORTHO05D003989 3.7e-11 71.2 67 56.7
TPR.G34776 Trifolium pratense HOM05D000849 ORTHO05D003989 3.7e-11 71.2 67 56.7
VMungo0251G1053 Vigna mungo HOM05D000849 ORTHO05D003989 3.7e-11 71.2 67 56.7
Zm00001eb178620 Zea mays HOM05D000849 ORTHO05D003989 3.7e-11 71.2 67 56.7
FAN08G2450 Fragaria x ananassa HOM05D000849 ORTHO05D003989 4.8e-11 70.9 67 55.2
Gohir.A05G027200 Gossypium hirsutum HOM05D000849 ORTHO05D003989 4.8e-11 70.9 67 56.7
Gorai.009G029200 Gossypium raimondii HOM05D000849 ORTHO05D003989 6.2e-11 70.5 67 56.7
THA.LOC104814582 Tarenaya hassleriana HOM05D000849 ORTHO05D003989 8.1e-11 70.1 67 55.2
Aqoxy7G03958 Aquilegia oxysepala HOM05D000849 ORTHO05D003989 1.1e-10 69.7 67 55.2
FvH4_5g22770 Fragaria vesca HOM05D000849 ORTHO05D003989 1.1e-10 69.7 67 53.7
FAN18G0868 Fragaria x ananassa HOM05D000849 ORTHO05D003989 1.1e-10 69.7 67 53.7
Os08g0395300 Oryza sativa ssp. japonica HOM05D000849 ORTHO05D003989 1.1e-10 69.7 67 55.2
PGR102G1239 Punica granatum HOM05D000849 ORTHO05D003989 1.1e-10 69.7 67 55.2
PSO210G0713 Papaver somniferum HOM05D000849 ORTHO05D003989 1.4e-10 69.3 67 55.2
HPP92_009846 Vanilla planifolia HOM05D000849 ORTHO05D003989 1.4e-10 69.3 67 53.7
MSTRG.6030 Avicennia marina HOM05D000849 ORTHO05D003989 3.1e-10 68.2 67 55.2
Pp3c14_14670 Physcomitrium patens HOM05D000849 ORTHO05D003989 5.3e-10 67.4 67 53.7
Aqoxy7G01359 Aquilegia oxysepala HOM05D000849 ORTHO05D003989 9.0e-10 66.6 67 53.7
Mapoly0016s0005 Marchantia polymorpha HOM05D000849 ORTHO05D003989 1.2e-09 66.2 67 52.2
SHI35260 Sapria himalayana HOM05D000558 ORTHO05D001857 1.2e-09 66.2 46 73.9
SHI46084 Sapria himalayana HOM05D000849 ORTHO05D003989 1.2e-09 66.2 46 71.7
SHI34965 Sapria himalayana HOM05D000849 ORTHO05D003989 2.0e-09 65.5 46 71.7
SHI50198 Sapria himalayana HOM05D000849 ORTHO05D003989 2.6e-09 65.1 46 71.7
CBR_g2797 Chara braunii HOM05D000849 ORTHO05D003989 3.4e-09 64.7 67 52.2
Glyma.05G224800 Glycine max HOM05D000849 ORTHO05D003989 3.4e-09 64.7 66 54.5
SMO196G0114 Selaginella moellendorffii HOM05D000849 ORTHO05D003989 3.4e-09 64.7 67 50.7
SHI43632 Sapria himalayana HOM05D000558 ORTHO05D001857 2.9e-08 61.6 46 69.6
MCO15G266 Micromonas commoda HOM05D000849 ORTHO05D003989 6.5e-08 60.5 67 46.3
SHI54080 Sapria himalayana HOM05D000849 ORTHO05D003989 1.1e-07 59.7 56 51.8
SHI38667 Sapria himalayana HOM05D000849 ORTHO05D003989 1.9e-07 58.9 46 67.4
SHI42703 Sapria himalayana HOM05D000849 ORTHO05D003989 3.2e-07 58.2 46 65.2
SHI27848 Sapria himalayana HOM05D000849 ORTHO05D370663 5.5e-07 57.4 28 85.7
SHI52623 Sapria himalayana HOM05D000849 ORTHO05D003989 9.3e-07 56.6 40 70.0
SHI53541 Sapria himalayana HOM05D000849 ORTHO05D003989 9.3e-07 56.6 40 72.5
SHI53653 Sapria himalayana HOM05D000849 ORTHO05D003989 9.3e-07 56.6 40 72.5
SHI27184 Sapria himalayana HOM05D000849 ORTHO05D003989 2.1e-06 55.5 56 51.8


User provided reference genes

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