Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI52114 Sapria himalayana HOM05D006464 ORTHO05D007923 2.0e-124 449.1 227 100.0
SHI18012 Sapria himalayana HOM05D006464 ORTHO05D007923 3.1e-109 398.7 278 77.7
GSVIVG01020873001 Vitis vinifera HOM05D006464 ORTHO05D007923 4.2e-98 361.7 278 69.4
QL93p0310_0071 Quercus lobata HOM05D006464 ORTHO05D007923 6.0e-97 357.8 278 69.1
QL04p093513 Quercus lobata HOM05D006464 ORTHO05D007923 7.8e-97 357.5 278 69.1
QL03p065678 Quercus lobata HOM05D006464 ORTHO05D007923 1.3e-96 356.7 278 69.1
QL04p093175 Quercus lobata HOM05D006464 ORTHO05D007923 1.7e-96 356.3 278 69.1
CiPaw.11G057900 Carya illinoinensis HOM05D006464 ORTHO05D007923 2.3e-96 355.9 278 68.3
PGR031G1485 Punica granatum HOM05D006464 ORTHO05D007923 2.3e-96 355.9 278 68.3
Gohir.D10G186900 Gossypium hirsutum HOM05D006464 ORTHO05D007923 3.0e-96 355.5 278 67.6
Gorai.011G209700 Gossypium raimondii HOM05D006464 ORTHO05D007923 3.0e-96 355.5 278 67.6
arahy.Tifrunner.gnm1.ann1.K4I1Z6 Arachis hypogaea HOM05D006464 ORTHO05D007923 3.9e-96 355.1 278 68.3
COL.COLO4_19419 Corchorus olitorius HOM05D006464 ORTHO05D007923 3.9e-96 355.1 278 68.7
Eucgr.H04993 Eucalyptus grandis HOM05D006464 ORTHO05D007923 3.9e-96 355.1 278 68.0
Gohir.A10G180000 Gossypium hirsutum HOM05D006464 ORTHO05D007923 3.9e-96 355.1 278 67.6
Potri.010G173400 Populus trichocarpa HOM05D006464 ORTHO05D007923 5.1e-96 354.8 278 68.0
TWI36G0676 Tripterygium wilfordii HOM05D006464 ORTHO05D007923 5.1e-96 354.8 278 68.3
Cc03_g09090 Coffea canephora HOM05D006464 ORTHO05D007923 6.6e-96 354.4 278 68.0
Manes.14G157747 Manihot esculenta HOM05D006464 ORTHO05D007923 6.6e-96 354.4 278 68.3
Haze_23251 Corylus avellana HOM05D006464 ORTHO05D007923 8.7e-96 354.0 278 68.3
CSS0045056 Camellia sinensis var. sinensis HOM05D006464 ORTHO05D007923 1.1e-95 353.6 278 68.3
Sabra10G0133300 Salix brachista HOM05D006464 ORTHO05D007923 1.1e-95 353.6 278 68.0
Cfa009889 Carpinus fangiana HOM05D006464 ORTHO05D007923 1.5e-95 353.2 278 68.0
Ca_18242_v3 Cicer arietinum L. HOM05D006464 ORTHO05D007923 2.5e-95 352.4 278 67.3
DCAR_013714 Daucus carota HOM05D006464 ORTHO05D007923 2.5e-95 352.4 278 67.3
Psat7g088600 Pisum sativum HOM05D006464 ORTHO05D007923 2.5e-95 352.4 278 67.6
TPR.G39331 Trifolium pratense HOM05D006464 ORTHO05D007923 2.5e-95 352.4 278 67.6
vmacro11686 Vaccinium macrocarpon HOM05D006464 ORTHO05D007923 2.5e-95 352.4 278 67.3
CsaV3_2G033410 Cucumis sativus L. HOM05D006464 ORTHO05D007923 3.3e-95 352.1 278 67.3
Medtr4g094688 Medicago truncatula HOM05D006464 ORTHO05D007923 5.6e-95 351.3 278 67.3
Rhsim06G0243700 Rhododendron simsii HOM05D006464 ORTHO05D007923 5.6e-95 351.3 278 67.3
MSTRG.16085 Avicennia marina HOM05D006464 ORTHO05D007923 7.3e-95 350.9 278 67.3
Peaxi162Scf00207g00514 Petunia axillaris HOM05D006464 ORTHO05D007923 7.3e-95 350.9 278 66.5
Thecc.10G179300 Theobroma cacao HOM05D006464 ORTHO05D007923 7.3e-95 350.9 278 67.3
Lj2C11T2 Lonicera japonica HOM05D006464 ORTHO05D007923 9.6e-95 350.5 278 67.3
Lalb_Chr07g0188381 Lupinus albus HOM05D006464 ORTHO05D007923 9.6e-95 350.5 278 67.6
Nn2g12307 Nelumbo nucifera HOM05D006464 ORTHO05D007923 9.6e-95 350.5 278 66.2
unitig_749.g13442 Utricularia gibba HOM05D006464 ORTHO05D007923 9.6e-95 350.5 278 66.2
CDE07G1255 Ceratophyllum demersum HOM05D006464 ORTHO05D007923 1.3e-94 350.1 278 66.5
PSO541G0939 Papaver somniferum HOM05D006464 ORTHO05D007923 1.3e-94 350.1 278 66.5
Hma1.2p1_0151F.1_g067100 Hydrangea macrophylla HOM05D006464 ORTHO05D007923 1.6e-94 349.7 278 66.9
Aqoxy1G01398 Aquilegia oxysepala HOM05D006464 ORTHO05D007923 2.1e-94 349.4 278 66.9
AUR62037646 Chenopodium quinoa HOM05D006464 ORTHO05D007923 2.8e-94 349.0 278 66.9
Sed0008800 Sechium edule HOM05D006464 ORTHO05D007923 2.8e-94 349.0 278 66.2
PGSC0003DMG400026230 Solanum tuberosum HOM05D006464 ORTHO05D007923 3.6e-94 348.6 278 66.5
Ciclev10004323m.g Citrus clementina HOM05D006464 ORTHO05D007923 4.8e-94 348.2 278 66.5
CDE04G3166 Ceratophyllum demersum HOM05D006464 ORTHO05D007923 6.2e-94 347.8 278 65.8
Dinv19578 Davidia involucrata HOM05D006464 ORTHO05D007923 6.2e-94 347.8 278 66.9
Prupe.4G129400 Prunus persica HOM05D006464 ORTHO05D007923 6.2e-94 347.8 278 66.9
HanXRQChr10g0283251 Helianthus annuus HOM05D006464 ORTHO05D007923 1.1e-93 347.1 278 67.3
Lsat_1_v5_gn_7_110921 Lactuca sativa HOM05D006464 ORTHO05D007923 1.1e-93 347.1 278 67.6
SalBow8G2731 Salvia bowleyana HOM05D006464 ORTHO05D007923 1.1e-93 347.1 278 66.5
ClCG11G008250 Citrullus lanatus HOM05D006464 ORTHO05D007923 1.4e-93 346.7 278 65.5
Solyc08g078150.1 Solanum lycopersicum HOM05D006464 ORTHO05D007923 1.4e-93 346.7 278 66.2
Sopen08g026650 Solanum pennellii HOM05D006464 ORTHO05D007923 1.4e-93 346.7 278 66.2
Cpa.g.sc32.87 Carica papaya HOM05D006464 ORTHO05D007923 1.8e-93 346.3 278 66.2
Duzib114G0960 Durio zibethinus HOM05D006464 ORTHO05D007923 1.8e-93 346.3 278 66.2
Glyma.19G055700 Glycine max HOM05D006464 ORTHO05D007923 1.8e-93 346.3 278 66.9
CAN.G1856.7 Capsicum annuum HOM05D006464 ORTHO05D007923 2.4e-93 345.9 278 66.2
MELO3C008113.2 Cucumis melo HOM05D006464 ORTHO05D007923 2.4e-93 345.9 274 67.2
FAN16G1625 Fragaria x ananassa HOM05D006464 ORTHO05D007923 2.4e-93 345.9 278 66.2
FAN25G3388 Fragaria x ananassa HOM05D006464 ORTHO05D007923 2.4e-93 345.9 278 66.2
MD05G1236700 Malus domestica HOM05D006464 ORTHO05D007923 2.4e-93 345.9 278 66.5
ATR0763G028 Amborella trichopoda HOM05D006464 ORTHO05D007923 3.1e-93 345.5 278 66.2
Glyma.05G072500 Glycine max HOM05D006464 ORTHO05D007923 3.1e-93 345.5 278 66.5
MBI02_g01129_MAGBIO Magnolia biondii HOM05D006464 ORTHO05D007923 3.1e-93 345.5 278 65.8
Nitab4.5_0020695g0010 Nicotiana tabacum HOM05D006464 ORTHO05D007923 3.1e-93 345.5 278 66.2
Atru.chr4.442 Acer truncatum HOM05D006464 ORTHO05D007923 4.0e-93 345.1 278 66.9
CSS0048512 Camellia sinensis var. sinensis HOM05D006464 ORTHO05D007923 4.0e-93 345.1 267 69.3
Lj4g0005133 Lotus japonicus HOM05D006464 ORTHO05D007923 4.0e-93 345.1 278 66.2
Medtr6g004710 Medicago truncatula HOM05D006464 ORTHO05D007923 4.0e-93 345.1 278 66.5
Ah.16g106150 Amaranthus hybridus HOM05D006464 ORTHO05D007923 5.3e-93 344.7 278 65.8
RcHm_v2.0_Chr5g0023761 Rosa chinensis HOM05D006464 ORTHO05D007923 5.3e-93 344.7 278 66.2
AUR62041047 Chenopodium quinoa HOM05D006464 ORTHO05D007923 6.9e-93 344.4 278 66.2
FvH4_3g14450 Fragaria vesca HOM05D006464 ORTHO05D007923 6.9e-93 344.4 278 65.8
Oeu033075.1 Olea europaea HOM05D006464 ORTHO05D007923 6.9e-93 344.4 278 65.1
PSO675G4723 Papaver somniferum HOM05D006464 ORTHO05D007923 6.9e-93 344.4 278 65.5
VMungo0464G1450 Vigna mungo HOM05D006464 ORTHO05D007923 6.9e-93 344.4 278 66.2
SGA_v2.0_scaffold7G03621 Striga asiatica HOM05D006464 ORTHO05D007923 9.0e-93 344.0 278 65.5
FAN11G0790 Fragaria x ananassa HOM05D006464 ORTHO05D007923 1.2e-92 343.6 278 65.5
Sc19g0006030 Simmondsia chinensis HOM05D006464 ORTHO05D007923 1.2e-92 343.6 278 65.1
Phvul.004G057900 Phaseolus vulgaris HOM05D006464 ORTHO05D007923 1.5e-92 343.2 278 66.2
THA.LOC104812381 Tarenaya hassleriana HOM05D006464 ORTHO05D007923 1.5e-92 343.2 278 65.8
TAR629G0921 Trochodendron aralioides HOM05D006464 ORTHO05D007923 1.5e-92 343.2 278 64.7
BcaB02g07217 Brassica carinata HOM05D006464 ORTHO05D007923 9.9e-92 340.5 278 65.5
Carub.0002s2635 Capsella rubella HOM05D006464 ORTHO05D007923 9.9e-92 340.5 278 65.8
A07p27120 Brassica napus HOM05D006464 ORTHO05D007923 1.3e-91 340.1 278 65.5
BraA07t30357Z Brassica rapa HOM05D006464 ORTHO05D007923 1.3e-91 340.1 278 65.5
FAN21G2631 Fragaria x ananassa HOM05D006464 ORTHO05D007923 1.7e-91 339.7 249 71.1
C06p29860 Brassica napus HOM05D006464 ORTHO05D007923 2.9e-91 339.0 278 65.1
BolC6t38148H Brassica oleracea HOM05D006464 ORTHO05D007923 2.9e-91 339.0 278 65.1
AL2G40100 Arabidopsis lyrata HOM05D006464 ORTHO05D007923 6.4e-91 337.8 278 65.1
AT1G79490 Arabidopsis thaliana HOM05D006464 ORTHO05D007923 6.4e-91 337.8 278 65.1
ECA236G4525 Erigeron canadensis HOM05D006464 ORTHO05D007923 6.4e-91 337.8 278 66.2
Thhalv10018121m.g Eutrema salsugineum HOM05D006464 ORTHO05D007923 6.4e-91 337.8 278 65.1
Sp5g34540 Schrenkiella parvula HOM05D006464 ORTHO05D007923 6.4e-91 337.8 278 64.7
CARHR073150 Cardamine hirsuta HOM05D006464 ORTHO05D007923 8.4e-91 337.4 278 65.1
Migut.M01509 Erythranthe guttata HOM05D006464 ORTHO05D007923 1.4e-90 336.7 278 64.0
Aa31LG4G1530 Aethionema arabicum HOM05D006464 ORTHO05D007923 2.1e-89 332.8 278 64.4
CSS0002738 Camellia sinensis var. sinensis HOM05D006464 ORTHO05D007923 2.1e-86 322.8 278 64.0
Os04g0612800 Oryza sativa ssp. japonica HOM05D006464 ORTHO05D007923 1.1e-85 320.5 278 60.8
SEGI_37454 Sequoiadendron giganteum HOM05D006464 ORTHO05D007923 1.1e-85 320.5 278 60.4
Zm00001eb071030 Zea mays HOM05D006464 ORTHO05D007923 4.0e-85 318.5 278 60.8
BcaC08g45354 Brassica carinata HOM05D006464 ORTHO05D007923 5.1e-80 301.6 278 60.8
BcaC08g45352 Brassica carinata HOM05D006464 ORTHO05D007923 2.4e-77 292.7 249 64.3
Actinidia12757 Actinidia chinensis HOM05D006464 ORTHO05D007923 3.1e-77 292.4 278 59.7
Actinidia24662 Actinidia chinensis HOM05D006464 ORTHO05D007923 1.8e-69 266.5 212 68.4
HPP92_005952 Vanilla planifolia HOM05D006464 ORTHO05D007923 2.6e-68 262.7 245 58.4
Hma1.2p1_0151F.1_g067090 Hydrangea macrophylla HOM05D006464 ORTHO05D007923 3.4e-68 262.3 199 67.8
Nitab4.5_0007774g0020 Nicotiana tabacum HOM05D003169 ORTHO05D003700 2.2e-43 179.9 134 70.1
MD10G1213500 Malus domestica HOM05D006464 ORTHO05D007923 4.7e-41 172.2 128 71.1
MD10G1213600 Malus domestica HOM05D006464 ORTHO05D007923 5.6e-18 95.5 60 78.3
SMO196G0223 Selaginella moellendorffii HOM05D006464 ORTHO05D007923 3.0e-11 73.2 199 26.1
AagrBONN_evm.TU.Sc2ySwM_228.2469 Anthoceros agrestis HOM05D004079 ORTHO05D005437 5.8e-07 58.9 219 25.1


User provided reference genes

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