Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI52089 Sapria himalayana HOM05D005261 ORTHO05D006180 6.7e-57 223.8 112 100.0
SHI51747 Sapria himalayana HOM05D005261 ORTHO05D006180 4.8e-55 217.6 112 97.3
SHI51067 Sapria himalayana HOM05D005261 ORTHO05D006180 6.5e-52 207.2 115 92.2
SHI53189 Sapria himalayana HOM05D005261 ORTHO05D006180 9.3e-43 176.8 101 90.1
SHI53472 Sapria himalayana HOM05D005261 ORTHO05D006180 6.3e-39 164.1 116 75.9
SHI52923 Sapria himalayana HOM05D005261 ORTHO05D006180 3.4e-37 158.3 116 75.0
SHI35611 Sapria himalayana HOM05D005261 ORTHO05D006180 4.1e-30 134.8 197 46.2
SHI24797 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-28 129.8 197 44.2
SHI34852 Sapria himalayana HOM05D005261 ORTHO05D006180 1.1e-27 126.7 100 69.0
SHI34844 Sapria himalayana HOM05D005261 ORTHO05D006180 8.0e-26 120.6 100 66.0
Dinv13059 Davidia involucrata HOM05D005261 ORTHO05D006180 4.4e-24 114.8 140 49.3
GSVIVG01008967001 Vitis vinifera HOM05D005261 ORTHO05D006180 4.4e-24 114.8 140 48.6
SHI20620 Sapria himalayana HOM05D005261 ORTHO05D006180 5.7e-24 114.4 113 58.4
Cpa.g.sc77.98 Carica papaya HOM05D005261 ORTHO05D006180 7.4e-24 114.0 140 45.7
CiPaw.06G023200 Carya illinoinensis HOM05D005261 ORTHO05D006180 1.7e-23 112.8 140 47.9
Gohir.D06G040600 Gossypium hirsutum HOM05D005261 ORTHO05D006180 1.7e-23 112.8 140 45.7
Gorai.010G045400 Gossypium raimondii HOM05D005261 ORTHO05D006180 1.7e-23 112.8 140 45.7
Sabra02G0072100 Salix brachista HOM05D005261 ORTHO05D006180 1.7e-23 112.8 140 45.0
SHI53236 Sapria himalayana HOM05D005261 ORTHO05D006180 1.7e-23 112.8 148 49.3
TWI56G1213 Tripterygium wilfordii HOM05D005261 ORTHO05D006180 1.7e-23 112.8 140 45.7
Duzib041G0715 Durio zibethinus HOM05D005261 ORTHO05D006180 2.2e-23 112.5 140 46.4
PGR042G1365 Punica granatum HOM05D005261 ORTHO05D006180 2.2e-23 112.5 140 46.4
THA.LOC104813129 Tarenaya hassleriana HOM05D005261 ORTHO05D006180 2.2e-23 112.5 140 45.7
TAR625G1239 Trochodendron aralioides HOM05D005261 ORTHO05D006180 2.2e-23 112.5 140 47.1
Ciclev10001407m.g Citrus clementina HOM05D005261 ORTHO05D006180 2.8e-23 112.1 140 46.4
Duzib093G0733 Durio zibethinus HOM05D005261 ORTHO05D006180 2.8e-23 112.1 140 44.3
Manes.02G212400 Manihot esculenta HOM05D005261 ORTHO05D006180 2.8e-23 112.1 140 45.7
Thecc.08G114100 Theobroma cacao HOM05D005261 ORTHO05D006180 2.8e-23 112.1 140 45.0
Thhalv10004311m.g Eutrema salsugineum HOM05D005261 ORTHO05D006180 3.7e-23 111.7 140 45.7
TWI36G1273 Tripterygium wilfordii HOM05D005261 ORTHO05D006180 3.7e-23 111.7 140 45.0
Haze_00548 Corylus avellana HOM05D005261 ORTHO05D006180 4.8e-23 111.3 140 45.7
Actinidia31491 Actinidia chinensis HOM05D005261 ORTHO05D006180 6.3e-23 110.9 140 47.9
Aa31LG6G9000 Aethionema arabicum HOM05D005261 ORTHO05D006180 8.2e-23 110.5 140 45.7
AT1G36310 Arabidopsis thaliana HOM05D005261 ORTHO05D006180 8.2e-23 110.5 140 45.7
Carub.0001s3363 Capsella rubella HOM05D005261 ORTHO05D006180 8.2e-23 110.5 140 45.7
FAN13G1502 Fragaria x ananassa HOM05D005261 ORTHO05D006180 8.2e-23 110.5 140 47.1
MD08G1174900 Malus domestica HOM05D005261 ORTHO05D006180 8.2e-23 110.5 140 47.1
Ca_26314_v3 Cicer arietinum L. HOM05D005261 ORTHO05D006180 1.1e-22 110.2 140 45.0
Prupe.1G509000 Prunus persica HOM05D005261 ORTHO05D006180 1.1e-22 110.2 140 47.1
Rhsim07G0199400 Rhododendron simsii HOM05D005261 ORTHO05D006180 1.1e-22 110.2 140 47.1
RhsimUnG0073100 Rhododendron simsii HOM05D005261 ORTHO05D006180 1.1e-22 110.2 140 47.1
BcaC07g37496 Brassica carinata HOM05D005261 ORTHO05D006180 1.4e-22 109.8 140 45.7
A08p07950 Brassica napus HOM05D005261 ORTHO05D006180 1.4e-22 109.8 140 45.7
BolC8t47816H Brassica oleracea HOM05D005261 ORTHO05D006180 1.4e-22 109.8 140 45.7
BraA08t32817Z Brassica rapa HOM05D005261 ORTHO05D006180 1.4e-22 109.8 140 45.7
FAN08G3477 Fragaria x ananassa HOM05D005261 ORTHO05D006180 1.4e-22 109.8 140 46.4
Lj3C845T19 Lonicera japonica HOM05D005261 ORTHO05D006180 1.4e-22 109.8 140 47.1
FvH4_5g38270 Fragaria vesca HOM05D005261 ORTHO05D006180 1.8e-22 109.4 140 46.4
FAN18G3314 Fragaria x ananassa HOM05D005261 ORTHO05D006180 1.8e-22 109.4 140 46.4
Nn5g28978 Nelumbo nucifera HOM05D005261 ORTHO05D006180 1.8e-22 109.4 140 45.0
RcHm_v2.0_Chr7g0240261 Rosa chinensis HOM05D005261 ORTHO05D006180 1.8e-22 109.4 140 46.4
Ah.03g139490 Amaranthus hybridus HOM05D005261 ORTHO05D006180 2.4e-22 109.0 140 45.0
BcaB03g13642 Brassica carinata HOM05D005261 ORTHO05D006180 2.4e-22 109.0 140 45.7
Hma1.2p1_0276F.1_g111370 Hydrangea macrophylla HOM05D005261 ORTHO05D006180 2.4e-22 109.0 140 46.4
Hma1.2p1_0276F.1_g111380 Hydrangea macrophylla HOM05D005261 ORTHO05D006180 2.4e-22 109.0 140 46.4
Potri.002G091300 Populus trichocarpa HOM05D005261 ORTHO05D006180 2.4e-22 109.0 140 44.3
QL12p035629 Quercus lobata HOM05D005261 ORTHO05D006180 2.4e-22 109.0 140 45.0
Atru.chr13.1289 Acer truncatum HOM05D005261 ORTHO05D006180 3.1e-22 108.6 140 46.4
CANSAT54G1848 Cannabis sativa HOM05D005261 ORTHO05D006180 3.1e-22 108.6 139 46.8
FAN04G2261 Fragaria x ananassa HOM05D005261 ORTHO05D006180 3.1e-22 108.6 140 47.1
Glyma.04G107300 Glycine max HOM05D005261 ORTHO05D006180 3.1e-22 108.6 140 46.4
Lsat_1_v5_gn_1_3980 Lactuca sativa HOM05D005261 ORTHO05D006180 3.1e-22 108.6 140 45.0
Lj1g0011675 Lotus japonicus HOM05D005261 ORTHO05D006180 3.1e-22 108.6 140 45.7
Sp1g30710 Schrenkiella parvula HOM05D005261 ORTHO05D006180 3.1e-22 108.6 140 44.3
TPR.G16249 Trifolium pratense HOM05D005261 ORTHO05D006180 3.1e-22 108.6 140 45.0
AL1G50930 Arabidopsis lyrata HOM05D005261 ORTHO05D006180 4.1e-22 108.2 140 45.0
ClCG11G007980 Citrullus lanatus HOM05D005261 ORTHO05D006180 4.1e-22 108.2 140 46.4
CsaV3_2G033630 Cucumis sativus L. HOM05D005261 ORTHO05D006180 4.1e-22 108.2 140 46.4
Eucgr.H00927 Eucalyptus grandis HOM05D005261 ORTHO05D006180 4.1e-22 108.2 140 45.0
vmacro04773 Vaccinium macrocarpon HOM05D005261 ORTHO05D006180 4.1e-22 108.2 140 45.7
EL10Ac1g01697 Beta vulgaris HOM05D005261 ORTHO05D006180 5.3e-22 107.8 140 43.6
AUR62022337 Chenopodium quinoa HOM05D005261 ORTHO05D006180 5.3e-22 107.8 140 44.3
Gohir.A06G039700 Gossypium hirsutum HOM05D005261 ORTHO05D006180 5.3e-22 107.8 147 43.5
Sc14g0001090 Simmondsia chinensis HOM05D005261 ORTHO05D006180 5.3e-22 107.8 140 45.7
Aqoxy6G00521 Aquilegia oxysepala HOM05D005261 ORTHO05D006180 7.0e-22 107.5 140 45.7
BcaC02g11530 Brassica carinata HOM05D005261 ORTHO05D006180 7.0e-22 107.5 140 43.6
C04p14350 Brassica napus HOM05D005261 ORTHO05D006180 7.0e-22 107.5 140 43.6
BolC4t23021H Brassica oleracea HOM05D005261 ORTHO05D006180 7.0e-22 107.5 140 43.6
MSTRG.24247 Avicennia marina HOM05D005261 ORTHO05D006180 9.1e-22 107.1 140 44.3
AUR62034370 Chenopodium quinoa HOM05D005261 ORTHO05D006180 9.1e-22 107.1 140 43.6
MELO3C008135.2 Cucumis melo HOM05D005261 ORTHO05D006180 9.1e-22 107.1 140 45.7
Psat5g135960 Pisum sativum HOM05D005261 ORTHO05D006180 9.1e-22 107.1 140 45.0
Cfa015937 Carpinus fangiana HOM05D005261 ORTHO05D006180 1.2e-21 106.7 140 44.3
CARHR034970 Cardamine hirsuta HOM05D005261 ORTHO05D006180 1.6e-21 106.3 140 44.3
Glyma.06G107100 Glycine max HOM05D005261 ORTHO05D006180 1.6e-21 106.3 140 45.7
Phvul.009G027100 Phaseolus vulgaris HOM05D005261 ORTHO05D006180 2.0e-21 105.9 140 43.6
A05p11060 Brassica napus HOM05D005261 ORTHO05D006180 2.6e-21 105.5 140 42.9
BraA05t20051Z Brassica rapa HOM05D005261 ORTHO05D006180 2.6e-21 105.5 140 42.9
VMungo1309G2277 Vigna mungo HOM05D005261 ORTHO05D006180 2.6e-21 105.5 140 44.3
Sed0017821 Sechium edule HOM05D005261 ORTHO05D006180 3.5e-21 105.1 140 44.3
HanXRQChr02g0043751 Helianthus annuus HOM05D005261 ORTHO05D006180 4.5e-21 104.8 140 45.0
AUR62033704 Chenopodium quinoa HOM05D005261 ORTHO05D006180 7.7e-21 104.0 140 43.6
Medtr2g460880 Medicago truncatula HOM05D005261 ORTHO05D006180 7.7e-21 104.0 140 42.1
unitig_22.g6794 Utricularia gibba HOM05D005261 ORTHO05D006180 7.7e-21 104.0 140 44.3
Dinv44727 Davidia involucrata HOM05D005261 ORTHO05D006180 1.0e-20 103.6 142 46.5
MBI02_g34268_MAGBIO Magnolia biondii HOM05D005261 ORTHO05D006180 1.0e-20 103.6 140 45.7
Oeu020872.1 Olea europaea HOM05D005261 ORTHO05D006180 1.0e-20 103.6 140 45.0
Os02g0750500 Oryza sativa ssp. japonica HOM05D005261 ORTHO05D006180 1.0e-20 103.6 140 44.3
SGA_v2.0_scaffold12G05968 Striga asiatica HOM05D005261 ORTHO05D006180 1.0e-20 103.6 140 45.0
Cc10_g05970 Coffea canephora HOM05D005261 ORTHO05D006180 1.7e-20 102.8 140 43.6
Sopen04g028560 Solanum pennellii HOM05D005261 ORTHO05D006180 1.7e-20 102.8 140 43.6
arahy.Tifrunner.gnm1.ann1.232HHD Arachis hypogaea HOM05D005261 ORTHO05D006180 2.9e-20 102.1 140 45.0
arahy.Tifrunner.gnm1.ann1.S5D643 Arachis hypogaea HOM05D005261 ORTHO05D006180 2.9e-20 102.1 140 45.0
DCAR_023858 Daucus carota HOM05D005261 ORTHO05D006180 2.9e-20 102.1 140 45.0
CAN.G617.12 Capsicum annuum HOM05D005261 ORTHO05D006180 3.8e-20 101.7 140 44.3
SEGI_02326 Sequoiadendron giganteum HOM05D005261 ORTHO05D006180 3.8e-20 101.7 140 43.6
Solyc04g072390.3 Solanum lycopersicum HOM05D005261 ORTHO05D006180 3.8e-20 101.7 140 42.9
AUR62036786 Chenopodium quinoa HOM05D005261 ORTHO05D006180 5.0e-20 101.3 140 42.1
Migut.N03156 Erythranthe guttata HOM05D005261 ORTHO05D006180 6.5e-20 100.9 140 42.1
HPP92_001925 Vanilla planifolia HOM05D005261 ORTHO05D006180 6.5e-20 100.9 140 45.7
PSO447G0033 Papaver somniferum HOM05D005261 ORTHO05D006180 1.1e-19 100.1 138 42.0
PSO541G3947 Papaver somniferum HOM05D005261 ORTHO05D006180 1.1e-19 100.1 138 42.0
SMO361G0461 Selaginella moellendorffii HOM05D005261 ORTHO05D006180 1.1e-19 100.1 140 40.7
CDE02G3063 Ceratophyllum demersum HOM05D005261 ORTHO05D006180 1.5e-19 99.8 140 44.3
PSO675G0151 Papaver somniferum HOM05D005261 ORTHO05D006180 1.5e-19 99.8 138 41.3
Zm00001eb255040 Zea mays HOM05D005261 ORTHO05D006180 1.5e-19 99.8 140 43.6
Peaxi162Scf00756g00436 Petunia axillaris HOM05D005261 ORTHO05D006180 1.9e-19 99.4 139 42.4
AagrBONN_evm.TU.Sc2ySwM_228.1177 Anthoceros agrestis HOM05D005261 ORTHO05D006180 5.5e-19 97.8 140 42.1
Nitab4.5_0001915g0120 Nicotiana tabacum HOM05D005261 ORTHO05D006180 5.5e-19 97.8 139 41.0
Nitab4.5_0002561g0060 Nicotiana tabacum HOM05D005261 ORTHO05D006180 5.5e-19 97.8 139 41.0
ATR0564G365 Amborella trichopoda HOM05D005261 ORTHO05D006180 1.6e-18 96.3 140 42.1
Nitab4.5_0003428g0020 Nicotiana tabacum HOM05D005261 ORTHO05D006180 2.7e-18 95.5 139 40.3
Mapoly0189s0001 Marchantia polymorpha HOM05D005261 ORTHO05D006180 3.6e-18 95.1 140 40.0
CBR_g15981 Chara braunii HOM05D005261 ORTHO05D006180 6.1e-18 94.4 134 42.5
Pp3c8_16200 Physcomitrium patens HOM05D005261 ORTHO05D006180 1.4e-17 93.2 140 42.1
COL.COLO4_16503 Corchorus olitorius HOM05D005261 ORTHO05D006180 1.1e-14 83.6 55 70.9
Lalb_Chr17g0344051 Lupinus albus HOM05D005261 ORTHO05D006180 5.3e-14 81.3 55 69.1
ECA247G1584 Erigeron canadensis HOM05D000230 ORTHO05D006180 1.2e-13 80.1 55 69.1
Rhsim10G0118000 Rhododendron simsii HOM05D005261 ORTHO05D006180 1.1e-11 73.6 55 67.3
SHI49044 Sapria himalayana HOM05D005261 ORTHO05D006180 1.9e-11 72.8 87 50.6
SHI43763 Sapria himalayana HOM05D005261 ORTHO05D006180 6.1e-10 67.8 170 32.9
SHI46120 Sapria himalayana HOM05D005261 ORTHO05D006180 1.8e-09 66.2 170 32.4
SalBow8G1448 Salvia bowleyana HOM05D005261 ORTHO05D006180 2.0e-08 62.8 107 42.1
Cre04.g224002 Chlamydomonas reinhardtii HOM05D005261 ORTHO05D006180 1.4e-06 56.6 153 29.4
SHI54958 Sapria himalayana HOM05D005261 ORTHO05D006180 5.4e-06 54.7 35 74.3


User provided reference genes

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