Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI51373 Sapria himalayana HOM05D001607 ORTHO05D010610 1.5e-45 185.7 85 100.0
SHI51257 Sapria himalayana HOM05D001607 ORTHO05D010610 1.9e-27 125.6 68 86.8
SHI51481 Sapria himalayana HOM05D001607 ORTHO05D010610 9.3e-27 123.2 62 90.3
SHI36760 Sapria himalayana HOM05D001607 ORTHO05D010610 2.7e-26 121.7 59 93.2
SHI52825 Sapria himalayana HOM05D001607 ORTHO05D001893 3.5e-26 121.3 65 84.6
SHI36350 Sapria himalayana HOM05D001607 ORTHO05D010610 3.9e-25 117.9 59 89.8
SHI53323 Sapria himalayana HOM05D001607 ORTHO05D010610 8.7e-25 116.7 58 91.4
SHI53307 Sapria himalayana HOM05D001607 ORTHO05D010610 2.5e-24 115.2 59 88.1
SHI27291 Sapria himalayana HOM05D001607 ORTHO05D001893 1.6e-23 112.5 68 79.4
SHI51575 Sapria himalayana HOM05D001607 ORTHO05D001893 1.8e-22 109.0 65 80.0
SHI51659 Sapria himalayana HOM05D001607 ORTHO05D001893 1.5e-21 105.9 64 78.1
SHI50875 Sapria himalayana HOM05D001607 ORTHO05D010610 2.0e-21 105.5 64 78.1
SHI49988 Sapria himalayana HOM05D001607 ORTHO05D010610 3.4e-21 104.8 68 72.1
SHI51493 Sapria himalayana HOM05D001607 ORTHO05D001893 1.0e-20 103.2 64 79.7
SHI52001 Sapria himalayana HOM05D001607 ORTHO05D010610 2.2e-20 102.1 64 78.1
SHI47040 Sapria himalayana HOM05D001607 ORTHO05D010610 2.9e-20 101.7 64 76.6
SHI47121 Sapria himalayana HOM05D001607 ORTHO05D010610 6.5e-20 100.5 64 76.6
SHI51314 Sapria himalayana HOM05D001607 ORTHO05D010610 2.5e-19 98.6 64 73.4
SHI50967 Sapria himalayana HOM05D001607 ORTHO05D010610 3.2e-19 98.2 68 73.5
SHI51363 Sapria himalayana HOM05D001607 ORTHO05D010610 3.2e-19 98.2 64 75.0
SHI51100 Sapria himalayana HOM05D001607 ORTHO05D010610 4.6e-18 94.4 64 73.4
SHI19793 Sapria himalayana HOM05D001607 ORTHO05D001893 1.4e-11 72.8 90 44.4
Cfa022712 Carpinus fangiana HOM05D001607 ORTHO05D001893 4.6e-10 67.8 98 44.9
Ciclev10004167m.g Citrus clementina HOM05D001607 ORTHO05D001893 4.6e-10 67.8 91 46.2
Manes.06G148500 Manihot esculenta HOM05D001607 ORTHO05D001893 4.6e-10 67.8 98 44.9
MBI18_g25519_MAGBIO Magnolia biondii HOM05D001607 ORTHO05D001893 6.1e-10 67.4 91 45.1
Lj5g0010480 Lotus japonicus HOM05D001607 ORTHO05D001893 7.9e-10 67.0 91 44.0
Sabra12G0106800 Salix brachista HOM05D001607 ORTHO05D001893 7.9e-10 67.0 98 44.9
GSVIVG01028929001 Vitis vinifera HOM05D001607 ORTHO05D001893 7.9e-10 67.0 92 44.6
arahy.Tifrunner.gnm1.ann1.2YSW8E Arachis hypogaea HOM05D001607 ORTHO05D001893 1.0e-09 66.6 98 43.9
Medtr1g101030 Medicago truncatula HOM05D001607 ORTHO05D001893 1.0e-09 66.6 98 43.9
Potri.012G142200 Populus trichocarpa HOM05D001607 ORTHO05D001893 1.0e-09 66.6 98 43.9
SHI50518 Sapria himalayana HOM05D001607 ORTHO05D010610 1.0e-09 66.6 43 72.1
Sc25g0000580 Simmondsia chinensis HOM05D001607 ORTHO05D001893 1.0e-09 66.6 98 43.9
Ah.07g207010 Amaranthus hybridus HOM05D001607 ORTHO05D001893 1.4e-09 66.2 92 44.6
Psat6g198240 Pisum sativum HOM05D001607 ORTHO05D001893 1.4e-09 66.2 98 43.9
CSS0006931 Camellia sinensis var. sinensis HOM05D001607 ORTHO05D001893 1.8e-09 65.9 98 43.9
ClCG01G004440 Citrullus lanatus HOM05D001607 ORTHO05D001893 3.0e-09 65.1 91 44.0
Glyma.09G137200 Glycine max HOM05D001607 ORTHO05D001893 3.0e-09 65.1 91 42.9
arahy.Tifrunner.gnm1.ann1.HZL4S5 Arachis hypogaea HOM05D001607 ORTHO05D001893 3.9e-09 64.7 98 42.9
arahy.Tifrunner.gnm1.ann1.M3PRP5 Arachis hypogaea HOM05D001607 ORTHO05D001893 3.9e-09 64.7 98 42.9
Ca_05502_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 3.9e-09 64.7 98 43.9
Haze_13673 Corylus avellana HOM05D001607 ORTHO05D001893 3.9e-09 64.7 97 44.3
MELO3C005470.2 Cucumis melo HOM05D001607 ORTHO05D001893 3.9e-09 64.7 91 42.9
CsaV3_5G004660 Cucumis sativus L. HOM05D001607 ORTHO05D001893 3.9e-09 64.7 91 42.9
Dinv28425 Davidia involucrata HOM05D001607 ORTHO05D001893 3.9e-09 64.7 98 43.9
Medtr0025s0060 Medicago truncatula HOM05D001607 ORTHO05D001893 3.9e-09 64.7 98 43.9
SHI50996 Sapria himalayana HOM05D001607 ORTHO05D010610 3.9e-09 64.7 30 93.3
CiPaw.04G071800 Carya illinoinensis HOM05D001607 ORTHO05D001893 5.1e-09 64.3 98 41.8
Lj1A999G29 Lonicera japonica HOM05D001607 ORTHO05D001893 5.1e-09 64.3 79 46.8
Lj2g0000053 Lotus japonicus HOM05D001607 ORTHO05D001893 5.1e-09 64.3 91 44.0
Rhsim03G0187200 Rhododendron simsii HOM05D001607 ORTHO05D001893 5.1e-09 64.3 98 42.9
Hund04758 Selenicereus undatus HOM05D001607 ORTHO05D001893 5.1e-09 64.3 98 41.8
vmacro06666 Vaccinium macrocarpon HOM05D001607 ORTHO05D001893 5.1e-09 64.3 98 42.9
SHI52823 Sapria himalayana HOM05D001607 ORTHO05D010610 6.7e-09 63.9 28 96.4
TPR.G8164 Trifolium pratense HOM05D001607 ORTHO05D001893 6.7e-09 63.9 91 42.9
Atru.chr1.433 Acer truncatum HOM05D001607 ORTHO05D001893 8.8e-09 63.5 91 42.9
Aqoxy1G00239 Aquilegia oxysepala HOM05D001607 ORTHO05D001893 8.8e-09 63.5 98 42.9
Glyma.16G182500 Glycine max HOM05D001607 ORTHO05D001893 8.8e-09 63.5 98 42.9
Gohir.A11G010500 Gossypium hirsutum HOM05D001607 ORTHO05D001893 8.8e-09 63.5 91 42.9
Gohir.D11G009700 Gossypium hirsutum HOM05D001607 ORTHO05D001893 8.8e-09 63.5 91 42.9
Gorai.007G011200 Gossypium raimondii HOM05D001607 ORTHO05D001893 8.8e-09 63.5 91 42.9
Ca_10751_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 1.1e-08 63.2 98 43.9
Glyma.10G234500 Glycine max HOM05D001607 ORTHO05D001893 1.1e-08 63.2 91 41.8
MD07G1272600 Malus domestica HOM05D001607 ORTHO05D001893 1.1e-08 63.2 92 43.5
PSO478G2555 Papaver somniferum HOM05D001607 ORTHO05D001893 1.1e-08 63.2 91 42.9
PSO782G3230 Papaver somniferum HOM05D001607 ORTHO05D001893 1.1e-08 63.2 91 42.9
Phvul.004G114200 Phaseolus vulgaris HOM05D001607 ORTHO05D001893 1.1e-08 63.2 98 42.9
VMungo0464G1130 Vigna mungo HOM05D001607 ORTHO05D001893 1.1e-08 63.2 98 42.9
CiPaw.03G107800 Carya illinoinensis HOM05D001607 ORTHO05D001893 1.5e-08 62.8 91 40.7
Eucgr.A02778 Eucalyptus grandis HOM05D001607 ORTHO05D001893 1.5e-08 62.8 91 42.9
Potri.015G145300 Populus trichocarpa HOM05D001607 ORTHO05D001893 1.5e-08 62.8 98 42.9
SHI38909 Sapria himalayana HOM05D001607 ORTHO05D010610 1.5e-08 62.8 28 96.4
TWI39G1280 Tripterygium wilfordii HOM05D001607 ORTHO05D001893 1.5e-08 62.8 91 42.9
EL10Ac3g05618 Beta vulgaris HOM05D001607 ORTHO05D001893 1.9e-08 62.4 91 44.0
Gohir.D08G110716 Gossypium hirsutum HOM05D001607 ORTHO05D001893 1.9e-08 62.4 91 41.8
Gorai.004G118300 Gossypium raimondii HOM05D001607 ORTHO05D001893 1.9e-08 62.4 91 41.8
MD01G1203100 Malus domestica HOM05D001607 ORTHO05D001893 1.9e-08 62.4 91 41.8
Prupe.2G295900 Prunus persica HOM05D001607 ORTHO05D001893 1.9e-08 62.4 91 41.8
SHI53915 Sapria himalayana HOM05D001607 ORTHO05D010610 1.9e-08 62.4 39 71.8
TAR375G0166 Trochodendron aralioides HOM05D001607 ORTHO05D001893 1.9e-08 62.4 91 41.8
ATR0680G301 Amborella trichopoda HOM05D001607 ORTHO05D001893 2.5e-08 62.0 95 40.0
AUR62015965 Chenopodium quinoa HOM05D001607 ORTHO05D001893 2.5e-08 62.0 92 43.5
AUR62021171 Chenopodium quinoa HOM05D001607 ORTHO05D001893 2.5e-08 62.0 92 43.5
Nn1g01507 Nelumbo nucifera HOM05D001607 ORTHO05D001893 2.5e-08 62.0 91 41.8
SHI51502 Sapria himalayana HOM05D001607 ORTHO05D010610 2.5e-08 62.0 30 86.7
Sed0028131 Sechium edule HOM05D001607 ORTHO05D001893 2.5e-08 62.0 91 42.9
Actinidia34121 Actinidia chinensis HOM05D001607 ORTHO05D001893 3.3e-08 61.6 98 41.8
CAN.G307.24 Capsicum annuum HOM05D001607 ORTHO05D001893 3.3e-08 61.6 98 41.8
Solyc03g025610.3 Solanum lycopersicum HOM05D001607 ORTHO05D001893 3.3e-08 61.6 98 41.8
Sopen03g004440 Solanum pennellii HOM05D001607 ORTHO05D001893 3.3e-08 61.6 98 41.8
Gohir.A08G099300 Gossypium hirsutum HOM05D001607 ORTHO05D001893 4.3e-08 61.2 98 41.8
SHI51824 Sapria himalayana HOM05D001607 ORTHO05D010610 4.3e-08 61.2 30 83.3
Cpa.g.sc107.66 Carica papaya HOM05D001607 ORTHO05D001893 5.7e-08 60.8 88 42.0
CDE08G0131 Ceratophyllum demersum HOM05D001607 ORTHO05D001893 5.7e-08 60.8 98 40.8
DCAR_001509 Daucus carota HOM05D001607 ORTHO05D001893 5.7e-08 60.8 91 41.8
Duzib205G1855 Durio zibethinus HOM05D001607 ORTHO05D001893 5.7e-08 60.8 98 42.9
FvH4_7g29630 Fragaria vesca HOM05D001607 ORTHO05D001893 5.7e-08 60.8 91 41.8
FAN01G0648 Fragaria x ananassa HOM05D001607 ORTHO05D001893 5.7e-08 60.8 91 41.8
FAN03G1039 Fragaria x ananassa HOM05D001607 ORTHO05D001893 5.7e-08 60.8 91 41.8
FAN03G1056 Fragaria x ananassa HOM05D001607 ORTHO05D001893 5.7e-08 60.8 91 41.8
FAN06G1924 Fragaria x ananassa HOM05D001607 ORTHO05D001893 5.7e-08 60.8 91 41.8
FAN06G4239 Fragaria x ananassa HOM05D001607 ORTHO05D001893 5.7e-08 60.8 91 41.8
FAN10G1529 Fragaria x ananassa HOM05D001607 ORTHO05D001893 5.7e-08 60.8 91 41.8
FAN10G2541 Fragaria x ananassa HOM05D001607 ORTHO05D001893 5.7e-08 60.8 91 41.8
Lalb_Chr02g0141081 Lupinus albus HOM05D001607 ORTHO05D001893 5.7e-08 60.8 91 41.8
SHI52576 Sapria himalayana HOM05D001607 ORTHO05D010610 5.7e-08 60.8 39 69.2
SHI53343 Sapria himalayana HOM05D001607 ORTHO05D010610 5.7e-08 60.8 27 96.3
SHI54211 Sapria himalayana HOM05D001607 ORTHO05D010610 5.7e-08 60.8 27 96.3
Actinidia25880 Actinidia chinensis HOM05D001607 ORTHO05D001893 7.4e-08 60.5 98 40.8
Zm00001eb249900 Zea mays HOM05D001607 ORTHO05D001893 7.4e-08 60.5 91 39.6
Duzib068G0651 Durio zibethinus HOM05D001607 ORTHO05D001893 9.7e-08 60.1 98 41.8
Lalb_Chr19g0130771 Lupinus albus HOM05D001607 ORTHO05D001893 1.3e-07 59.7 98 41.8
Nitab4.5_0005845g0050 Nicotiana tabacum HOM05D001607 ORTHO05D001893 1.3e-07 59.7 98 40.8
Phvul.007G071600 Phaseolus vulgaris HOM05D001607 ORTHO05D001893 1.3e-07 59.7 95 40.0
SHI53064 Sapria himalayana HOM05D001607 ORTHO05D010610 1.3e-07 59.7 39 69.2
Sopen03g004450 Solanum pennellii HOM05D001607 ORTHO05D001893 1.3e-07 59.7 98 40.8
Thecc.03G178600 Theobroma cacao HOM05D001607 ORTHO05D001893 1.3e-07 59.7 98 41.8
arahy.Tifrunner.gnm1.ann1.CMMP9X Arachis hypogaea HOM05D001607 ORTHO05D001893 1.7e-07 59.3 91 40.7
arahy.Tifrunner.gnm1.ann1.GK85WT Arachis hypogaea HOM05D001607 ORTHO05D001893 1.7e-07 59.3 91 40.7
COL.COLO4_14332 Corchorus olitorius HOM05D001607 ORTHO05D001893 2.2e-07 58.9 98 41.8
Peaxi162Scf00444g00720 Petunia axillaris HOM05D001607 ORTHO05D001893 2.2e-07 58.9 100 39.0
RcHm_v2.0_Chr1g0377641 Rosa chinensis HOM05D001607 ORTHO05D001893 2.2e-07 58.9 91 40.7
Aa31LG6G2920 Aethionema arabicum HOM05D001607 ORTHO05D001893 2.8e-07 58.5 89 42.7
SHI52885 Sapria himalayana HOM05D001607 ORTHO05D010610 2.8e-07 58.5 39 66.7
CANSAT21G1423 Cannabis sativa HOM05D001607 ORTHO05D001893 3.7e-07 58.2 95 42.1
Carub.0007s2059 Capsella rubella HOM05D001607 ORTHO05D001893 3.7e-07 58.2 89 43.8
CARHR227400 Cardamine hirsuta HOM05D001607 ORTHO05D001893 4.8e-07 57.8 89 42.7
Os02g0664300 Oryza sativa ssp. japonica HOM05D001607 ORTHO05D001893 4.8e-07 57.8 91 38.5
SHI50834 Sapria himalayana HOM05D001607 ORTHO05D010610 4.8e-07 57.8 27 88.9
SHI52916 Sapria himalayana HOM05D001607 ORTHO05D010610 4.8e-07 57.8 27 88.9
SHI53240 Sapria himalayana HOM05D001607 ORTHO05D010610 4.8e-07 57.8 30 80.0
Psat0s3405g0040 Pisum sativum HOM05D001607 ORTHO05D001893 6.3e-07 57.4 92 42.4
SHI52799 Sapria himalayana HOM05D001607 ORTHO05D010610 6.3e-07 57.4 27 92.6
SHI52897 Sapria himalayana HOM05D001607 ORTHO05D010610 6.3e-07 57.4 27 92.6
SHI53468 Sapria himalayana HOM05D001607 ORTHO05D001893 6.3e-07 57.4 27 88.9
SHI54070 Sapria himalayana HOM05D001607 ORTHO05D010610 6.3e-07 57.4 28 85.7
VMungo0720G1584 Vigna mungo HOM05D001607 ORTHO05D001893 6.3e-07 57.4 91 39.6
SHI51434 Sapria himalayana HOM05D001607 ORTHO05D010610 8.2e-07 57.0 27 92.6
SHI52836 Sapria himalayana HOM05D001607 ORTHO05D010610 8.2e-07 57.0 39 66.7
PGR042G0514 Punica granatum HOM05D001607 ORTHO05D001893 1.1e-06 56.6 98 39.8
SHI53663 Sapria himalayana HOM05D001607 ORTHO05D010610 1.1e-06 56.6 27 92.6
SEGI_31249 Sequoiadendron giganteum HOM05D001607 ORTHO05D001893 1.1e-06 56.6 88 38.6
Oeu045396.1 Olea europaea HOM05D001607 ORTHO05D001893 1.4e-06 56.2 98 39.8
Migut.F00330 Erythranthe guttata HOM05D001607 ORTHO05D001893 1.8e-06 55.8 95 40.0
AL7G33300 Arabidopsis lyrata HOM05D001607 ORTHO05D001893 2.4e-06 55.5 88 42.0
AT4G20850 Arabidopsis thaliana HOM05D001607 ORTHO05D001893 2.4e-06 55.5 88 42.0
SHI20615 Sapria himalayana HOM05D001607 ORTHO05D010610 3.1e-06 55.1 27 88.9
BcaNung05068 Brassica carinata HOM05D001607 ORTHO05D001893 4.1e-06 54.7 88 43.2
A03p52520 Brassica napus HOM05D001607 ORTHO05D001893 4.1e-06 54.7 88 43.2
C07p50960 Brassica napus HOM05D001607 ORTHO05D001893 4.1e-06 54.7 88 43.2
BolC7t45597H Brassica oleracea HOM05D001607 ORTHO05D001893 4.1e-06 54.7 88 43.2
Sp7g18940 Schrenkiella parvula HOM05D001607 ORTHO05D001893 5.3e-06 54.3 88 42.0
THA.LOC104812206 Tarenaya hassleriana HOM05D001607 ORTHO05D001893 5.3e-06 54.3 89 40.4
unitig_46.g18794 Utricularia gibba HOM05D001607 ORTHO05D001893 5.3e-06 54.3 102 37.3
MSTRG.27107 Avicennia marina HOM05D001607 ORTHO05D001893 6.9e-06 53.9 98 39.8
Thhalv10024222m.g Eutrema salsugineum HOM05D001607 ORTHO05D001893 6.9e-06 53.9 88 40.9
SalBow4G1573 Salvia bowleyana HOM05D001607 ORTHO05D001893 6.9e-06 53.9 98 39.8
SGA_v2.0_scaffold44G16733 Striga asiatica HOM05D001607 ORTHO05D001893 6.9e-06 53.9 91 38.5
Glyma.10G109100 Glycine max HOM05D001607 ORTHO05D001893 9.1e-06 53.5 92 35.9


User provided reference genes

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