Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI51348 Sapria himalayana HOM05D005450 ORTHO05D006880 1.4e-119 433.0 224 100.0
Thecc.03G305800 Theobroma cacao HOM05D005450 ORTHO05D006880 1.2e-33 147.5 241 44.0
TPR.G8114 Trifolium pratense HOM05D005450 ORTHO05D006880 3.5e-33 146.0 256 42.6
Manes.15G193000 Manihot esculenta HOM05D005450 ORTHO05D006880 6.0e-33 145.2 237 43.9
Medtr5g029900 Medicago truncatula HOM05D005450 ORTHO05D006880 7.9e-33 144.8 254 43.3
COL.COLO4_16985 Corchorus olitorius HOM05D005450 ORTHO05D006880 1.0e-32 144.4 243 41.2
Duzib205G1163 Durio zibethinus HOM05D005450 ORTHO05D006880 2.3e-32 143.3 242 42.1
Glyma.09G205900 Glycine max HOM05D005450 ORTHO05D006880 5.1e-32 142.1 243 42.4
FvH4_5g22460 Fragaria vesca HOM05D005450 ORTHO05D006880 1.1e-31 141.0 213 44.1
FAN08G0023 Fragaria x ananassa HOM05D005450 ORTHO05D006880 1.1e-31 141.0 213 42.7
FAN18G0707 Fragaria x ananassa HOM05D005450 ORTHO05D006880 1.1e-31 141.0 213 44.1
FAN18G2323 Fragaria x ananassa HOM05D005450 ORTHO05D006880 1.1e-31 141.0 213 44.1
RcHm_v2.0_Chr7g0210251 Rosa chinensis HOM05D005450 ORTHO05D006880 1.1e-31 141.0 213 43.2
FAN04G1305 Fragaria x ananassa HOM05D005450 ORTHO05D006880 1.9e-31 140.2 213 42.3
Potri.001G140300 Populus trichocarpa HOM05D005450 ORTHO05D006880 1.9e-31 140.2 240 42.5
TWI60G0421 Tripterygium wilfordii HOM05D005450 ORTHO05D006880 1.9e-31 140.2 236 41.9
Haze_08190 Corylus avellana HOM05D005450 ORTHO05D006880 2.5e-31 139.8 246 41.1
FAN13G0945 Fragaria x ananassa HOM05D005450 ORTHO05D006880 2.5e-31 139.8 213 42.3
Ca_25196_v3 Cicer arietinum L. HOM05D005450 ORTHO05D006880 3.3e-31 139.4 257 40.5
Cpa.g.c28481.1 Carica papaya HOM05D005450 ORTHO05D006880 4.3e-31 139.0 168 48.8
Glyma.01G016900 Glycine max HOM05D005450 ORTHO05D006880 4.3e-31 139.0 243 41.6
arahy.Tifrunner.gnm1.ann1.95XRJP Arachis hypogaea HOM05D005450 ORTHO05D006880 5.6e-31 138.7 231 42.9
arahy.Tifrunner.gnm1.ann1.M4GMJK Arachis hypogaea HOM05D005450 ORTHO05D006880 5.6e-31 138.7 231 42.9
CANSAT21G1200 Cannabis sativa HOM05D005450 ORTHO05D006880 5.6e-31 138.7 240 41.7
Nn3g19446 Nelumbo nucifera HOM05D005450 ORTHO05D006880 7.4e-31 138.3 241 42.3
MD16G1272400 Malus domestica HOM05D005450 ORTHO05D006880 9.6e-31 137.9 207 43.5
Gohir.A12G207500 Gossypium hirsutum HOM05D005450 ORTHO05D006880 1.3e-30 137.5 207 41.1
TWI81G0857 Tripterygium wilfordii HOM05D005450 ORTHO05D006880 2.8e-30 136.3 238 40.3
Migut.E00784 Erythranthe guttata HOM05D005450 ORTHO05D006880 3.7e-30 136.0 232 43.5
Gorai.008G225500 Gossypium raimondii HOM05D005450 ORTHO05D006880 4.8e-30 135.6 240 38.8
Psat2g137240 Pisum sativum HOM05D005450 ORTHO05D006880 8.1e-30 134.8 214 44.4
PGR031G1299 Punica granatum HOM05D005450 ORTHO05D006880 1.1e-29 134.4 243 40.7
AUR62007307 Chenopodium quinoa HOM05D005450 ORTHO05D006880 1.4e-29 134.0 127 55.1
Nitab4.5_0000353g0110 Nicotiana tabacum HOM05D005450 ORTHO05D006880 1.4e-29 134.0 228 44.7
Gohir.D12G209900 Gossypium hirsutum HOM05D005450 ORTHO05D006880 2.4e-29 133.3 239 38.1
Lalb_Chr05g0215901 Lupinus albus HOM05D005450 ORTHO05D006880 2.4e-29 133.3 215 42.8
Nitab4.5_0002203g0010 Nicotiana tabacum HOM05D005450 ORTHO05D006880 2.4e-29 133.3 237 41.8
Eucgr.D02212 Eucalyptus grandis HOM05D005450 ORTHO05D006880 3.1e-29 132.9 244 40.6
VMungo1215G2703 Vigna mungo HOM05D005450 ORTHO05D006880 3.1e-29 132.9 206 43.2
Prupe.5G032300 Prunus persica HOM05D005450 ORTHO05D006880 4.0e-29 132.5 209 42.1
MSTRG.1990 Avicennia marina HOM05D005450 ORTHO05D006880 5.3e-29 132.1 174 47.7
CSS0022331 Camellia sinensis var. sinensis HOM05D005450 ORTHO05D006880 5.3e-29 132.1 228 42.1
CSS0031650 Camellia sinensis var. sinensis HOM05D005450 ORTHO05D006880 6.9e-29 131.7 205 43.4
Cc08_g03160 Coffea canephora HOM05D005450 ORTHO05D006880 9.0e-29 131.3 222 40.5
vmacro00310 Vaccinium macrocarpon HOM05D005450 ORTHO05D006880 9.0e-29 131.3 240 40.8
CSS0005386 Camellia sinensis var. sinensis HOM05D005450 ORTHO05D006880 1.2e-28 131.0 205 43.4
MD06G1037000 Malus domestica HOM05D005450 ORTHO05D006880 1.2e-28 131.0 207 41.5
BcaC06g34338 Brassica carinata HOM05D005450 ORTHO05D006880 1.5e-28 130.6 249 38.6
C07p30200 Brassica napus HOM05D005450 ORTHO05D006880 1.5e-28 130.6 249 38.6
BolC7t43556H Brassica oleracea HOM05D005450 ORTHO05D006880 1.5e-28 130.6 249 38.6
Actinidia25982 Actinidia chinensis HOM05D005450 ORTHO05D006880 2.6e-28 129.8 240 40.0
Ah.12g055200 Amaranthus hybridus HOM05D005450 ORTHO05D006880 2.6e-28 129.8 175 44.0
Lj2g0023622 Lotus japonicus HOM05D005450 ORTHO05D006880 2.6e-28 129.8 248 40.3
A06p45580 Brassica napus HOM05D005450 ORTHO05D006880 3.4e-28 129.4 249 38.2
BraA06t27430Z Brassica rapa HOM05D005450 ORTHO05D006880 3.4e-28 129.4 249 38.2
Thhalv10000858m.g Eutrema salsugineum HOM05D005450 ORTHO05D006880 5.8e-28 128.6 168 44.6
Sed0009079 Sechium edule HOM05D005450 ORTHO05D006880 5.8e-28 128.6 266 36.1
CiPaw.11G095800 Carya illinoinensis HOM05D005450 ORTHO05D006880 7.6e-28 128.3 204 42.2
Phvul.002G139900 Phaseolus vulgaris HOM05D005450 ORTHO05D006880 7.6e-28 128.3 255 39.6
QL12p004713 Quercus lobata HOM05D005450 ORTHO05D006880 7.6e-28 128.3 250 38.4
Sp2g11640 Schrenkiella parvula HOM05D005450 ORTHO05D006880 7.6e-28 128.3 253 37.5
ECA233G1178 Erigeron canadensis HOM05D005450 ORTHO05D006880 1.3e-27 127.5 230 41.3
Aqoxy3G02278 Aquilegia oxysepala HOM05D005450 ORTHO05D006880 1.7e-27 127.1 210 40.5
ClCG10G001470 Citrullus lanatus HOM05D005450 ORTHO05D006880 1.7e-27 127.1 265 38.1
Potri.003G093900 Populus trichocarpa HOM05D005450 ORTHO05D006880 2.2e-27 126.7 207 42.5
Ciclev10014807m.g Citrus clementina HOM05D005450 ORTHO05D006880 2.9e-27 126.3 204 44.1
Sc22g0001610 Simmondsia chinensis HOM05D005450 ORTHO05D006880 2.9e-27 126.3 246 37.8
ATR0665G143 Amborella trichopoda HOM05D005450 ORTHO05D006880 3.8e-27 125.9 104 57.7
MELO3C013841.2 Cucumis melo HOM05D005450 ORTHO05D006880 3.8e-27 125.9 266 38.0
Solyc08g076660.3 Solanum lycopersicum HOM05D005450 ORTHO05D006880 3.8e-27 125.9 237 41.8
BcaC06g31440 Brassica carinata HOM05D005450 ORTHO05D006880 4.9e-27 125.6 251 37.5
Actinidia03357 Actinidia chinensis HOM05D005450 ORTHO05D006880 6.5e-27 125.2 239 40.6
Dinv25238 Davidia involucrata HOM05D005450 ORTHO05D006880 6.5e-27 125.2 239 41.0
PGSC0003DMG400017545 Solanum tuberosum HOM05D005450 ORTHO05D006880 6.5e-27 125.2 238 41.6
AT5G46840 Arabidopsis thaliana HOM05D005450 ORTHO05D006880 8.4e-27 124.8 210 41.0
CsaV3_3G001550 Cucumis sativus L. HOM05D005450 ORTHO05D006880 8.4e-27 124.8 266 37.6
Sopen08g025210 Solanum pennellii HOM05D005450 ORTHO05D006880 8.4e-27 124.8 237 40.5
Sabra01G0109200 Salix brachista HOM05D005450 ORTHO05D006880 1.1e-26 124.4 205 42.4
Peaxi162Scf00170g01229 Petunia axillaris HOM05D005450 ORTHO05D006880 1.4e-26 124.0 210 41.4
Hund11224 Selenicereus undatus HOM05D005450 ORTHO05D006880 1.4e-26 124.0 218 42.7
AL8G11490 Arabidopsis lyrata HOM05D005450 ORTHO05D006880 1.9e-26 123.6 218 39.4
AUR62018696 Chenopodium quinoa HOM05D005450 ORTHO05D006880 2.5e-26 123.2 261 38.3
unitig_699.g19789 Utricularia gibba HOM05D005450 ORTHO05D001249 2.5e-26 123.2 218 41.3
GSVIVG01013130001 Vitis vinifera HOM05D005450 ORTHO05D006880 2.5e-26 123.2 194 44.3
Atru.chr6.1648 Acer truncatum HOM05D005450 ORTHO05D006880 3.2e-26 122.9 250 37.6
EL10Ac5g12080 Beta vulgaris HOM05D005450 ORTHO05D006880 3.2e-26 122.9 256 39.1
CARHR174610 Cardamine hirsuta HOM05D005450 ORTHO05D006880 3.2e-26 122.9 254 38.2
DCAR_008245 Daucus carota HOM05D005450 ORTHO05D006880 3.2e-26 122.9 254 38.2
Aa31LG9G6020 Aethionema arabicum HOM05D005450 ORTHO05D006880 4.2e-26 122.5 208 39.4
Hma1.2p1_0303F.1_g118850 Hydrangea macrophylla HOM05D005450 ORTHO05D006880 4.2e-26 122.5 207 40.1
Hma1.2p1_0303F.1_g118860 Hydrangea macrophylla HOM05D005450 ORTHO05D006880 4.2e-26 122.5 207 40.1
MBI04_g05750_MAGBIO Magnolia biondii HOM05D005450 ORTHO05D006880 4.2e-26 122.5 223 37.2
TAR375G0838 Trochodendron aralioides HOM05D005450 ORTHO05D006880 5.5e-26 122.1 223 35.9
Lalb_Chr16g0381251 Lupinus albus HOM05D005450 ORTHO05D006880 7.1e-26 121.7 84 69.0
CDE11G1012 Ceratophyllum demersum HOM05D005450 ORTHO05D006880 9.3e-26 121.3 232 41.4
HanXRQChr04g0099011 Helianthus annuus HOM05D005450 ORTHO05D006880 9.3e-26 121.3 223 42.6
Rhsim11G0018700 Rhododendron simsii HOM05D005450 ORTHO05D006880 9.3e-26 121.3 254 38.6
Lsat_1_v5_gn_6_4021 Lactuca sativa HOM05D005450 ORTHO05D006880 1.2e-25 120.9 235 43.4
SGA_v2.0_scaffold6G03148 Striga asiatica HOM05D005450 ORTHO05D001776 1.2e-25 120.9 220 40.9
Lj2A234T41 Lonicera japonica HOM05D005450 ORTHO05D006880 1.6e-25 120.6 215 40.9
vmacro14185 Vaccinium macrocarpon HOM05D005450 ORTHO05D006880 1.6e-25 120.6 197 40.1
THA.LOC104806699 Tarenaya hassleriana HOM05D005450 ORTHO05D006880 6.0e-25 118.6 174 41.4
HPP92_020907 Vanilla planifolia HOM05D005450 ORTHO05D006880 6.0e-25 118.6 231 39.0
Carub.0008s0107 Capsella rubella HOM05D005450 ORTHO05D006880 7.9e-25 118.2 218 38.1
Os03g0854300 Oryza sativa ssp. japonica HOM05D005450 ORTHO05D006880 7.9e-25 118.2 243 38.7
HanXRQChr13g0395441 Helianthus annuus HOM05D005450 ORTHO05D006880 1.0e-24 117.9 205 40.0
Actinidia14788 Actinidia chinensis HOM05D005450 ORTHO05D006880 3.9e-24 115.9 203 41.9
SEGI_20635 Sequoiadendron giganteum HOM05D005450 ORTHO05D006880 5.1e-24 115.5 249 34.9
Zm00001eb210550 Zea mays HOM05D005450 ORTHO05D006880 3.3e-23 112.8 224 37.1
PSO782G2687 Papaver somniferum HOM05D005450 ORTHO05D006880 4.3e-23 112.5 208 38.5
PSO063G4121 Papaver somniferum HOM05D005450 ORTHO05D006880 1.6e-22 110.5 207 36.2
Rhsim07G0129900 Rhododendron simsii HOM05D005450 ORTHO05D006880 2.9e-19 99.8 201 37.8
AagrBONN_evm.TU.Sc2ySwM_228.2336 Anthoceros agrestis HOM05D005450 ORTHO05D006880 2.7e-17 93.2 108 48.1
CDE11G0708 Ceratophyllum demersum HOM05D005450 ORTHO05D006880 3.6e-17 92.8 116 41.4
CBR_g19667 Chara braunii HOM05D005450 ORTHO05D006880 1.8e-16 90.5 135 41.5
BcaC03g16897 Brassica carinata HOM05D005450 ORTHO05D006880 9.7e-15 84.7 60 65.0
C02p47970 Brassica napus HOM05D005450 ORTHO05D006880 9.7e-15 84.7 60 65.0
BolC2t10828H Brassica oleracea HOM05D005450 ORTHO05D006880 9.7e-15 84.7 60 65.0
MCO09G223 Micromonas commoda HOM05D005450 ORTHO05D006880 6.3e-14 82.0 123 43.1
BcaC03g16894 Brassica carinata HOM05D005450 ORTHO05D006880 1.2e-12 77.8 77 51.9
C02p47920 Brassica napus HOM05D005450 ORTHO05D006880 1.5e-12 77.4 77 51.9
BolC2t10824H Brassica oleracea HOM05D005450 ORTHO05D006880 1.5e-12 77.4 77 51.9
Pp3c17_19260 Physcomitrium patens HOM05D005450 ORTHO05D006880 1.1e-10 71.2 257 32.3
Mapoly0168s0008 Marchantia polymorpha HOM05D005450 ORTHO05D006880 7.9e-09 65.1 222 31.1
Cre16.g659150 Chlamydomonas reinhardtii HOM05D005450 ORTHO05D006880 3.0e-08 63.2 136 34.6
CSS0028579 Camellia sinensis var. sinensis HOM05D005450 ORTHO05D006880 3.3e-07 59.7 42 61.9


User provided reference genes

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