Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI51143 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-170 602.4 294 100.0
SHI36380 Sapria himalayana HOM05D001560 ORTHO05D004675 7.4e-156 553.9 297 93.6
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 2.5e-151 538.9 280 95.4
SHI33931 Sapria himalayana HOM05D001560 ORTHO05D004675 6.9e-138 494.2 277 89.9
SHI35188 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-121 440.3 241 90.9
SHI36971 Sapria himalayana HOM05D001560 ORTHO05D004675 4.0e-117 425.2 273 81.7
SHI37085 Sapria himalayana HOM05D001560 ORTHO05D004675 2.0e-116 422.9 277 80.1
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 8.3e-115 417.5 264 80.7
SHI35231 Sapria himalayana HOM05D001560 ORTHO05D004675 6.3e-107 391.3 280 75.0
SHI36583 Sapria himalayana HOM05D001560 ORTHO05D004675 6.6e-104 381.3 328 64.9
SHI37162 Sapria himalayana HOM05D001560 ORTHO05D004675 5.6e-103 378.3 242 81.0
SHI49196 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-98 363.2 281 69.0
SHI45393 Sapria himalayana HOM05D001560 ORTHO05D004675 6.8e-93 344.7 280 66.4
SHI36016 Sapria himalayana HOM05D001560 ORTHO05D004675 4.4e-92 342.0 222 79.3
Aa31csc239G40 Aethionema arabicum HOM05D001560 ORTHO05D004675 7.0e-90 334.7 170 93.5
BolSC28t60362H Brassica oleracea HOM05D001560 ORTHO05D004675 7.0e-90 334.7 170 93.5
BraSC48t46349Z Brassica rapa HOM05D001560 ORTHO05D004675 7.0e-90 334.7 170 93.5
Thhalv10022839m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 7.0e-90 334.7 170 93.5
Sp3g25870 Schrenkiella parvula HOM05D001560 ORTHO05D004675 7.0e-90 334.7 170 93.5
ATMG00070 Arabidopsis thaliana HOM05D001560 ORTHO05D004675 1.6e-89 333.6 170 92.9
CARHR282620 Cardamine hirsuta HOM05D001560 ORTHO05D004675 1.6e-89 333.6 170 92.9
BcaC09g49590 Brassica carinata HOM05D001560 ORTHO05D004675 3.5e-89 332.4 170 92.9
SHI40934 Sapria himalayana HOM05D001560 ORTHO05D004675 7.8e-89 331.3 265 67.9
CsaV3_UNG210330 Cucumis sativus L. HOM05D001560 ORTHO05D004675 1.0e-88 330.9 169 93.5
Gohir.A01G022400 Gossypium hirsutum HOM05D001560 ORTHO05D004675 1.0e-88 330.9 170 92.4
SHI48979 Sapria himalayana HOM05D001560 ORTHO05D004675 2.3e-88 329.7 166 94.6
Thhalv10002997m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 3.9e-88 328.9 170 92.4
SGA_v2.0_scaffold245G44645 Striga asiatica HOM05D001560 ORTHO05D004675 3.9e-88 328.9 170 92.4
SHI47572 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-87 327.4 247 69.6
CAN.G223.15 Capsicum annuum HOM05D001560 ORTHO05D004675 1.5e-87 327.0 170 91.8
LjContig00439g0006307 Lotus japonicus HOM05D001560 ORTHO05D004675 1.5e-87 327.0 170 91.8
LjContig00446g0014136 Lotus japonicus HOM05D001560 ORTHO05D004675 1.5e-87 327.0 170 91.8
Potri.013G066660 Populus trichocarpa HOM05D001560 ORTHO05D004675 1.5e-87 327.0 170 91.2
arahy.Tifrunner.gnm1.ann1.HAH5KR Arachis hypogaea HOM05D001560 ORTHO05D004675 2.5e-87 326.2 170 91.2
SalBow1G1852 Salvia bowleyana HOM05D001560 ORTHO05D004675 2.5e-87 326.2 170 91.2
Lalb_Chr00c39g0409121 Lupinus albus HOM05D001560 ORTHO05D004675 3.3e-87 325.9 170 91.8
Lalb_Chr00c39g0409261 Lupinus albus HOM05D001560 ORTHO05D004675 3.3e-87 325.9 170 91.8
Lalb_Chr00c51g0413181 Lupinus albus HOM05D001560 ORTHO05D004675 3.3e-87 325.9 170 91.8
Lj2P1224T99 Lonicera japonica HOM05D001560 ORTHO05D004675 4.3e-87 325.5 170 91.8
Lj2P1227T100 Lonicera japonica HOM05D001560 ORTHO05D004675 4.3e-87 325.5 170 91.8
Sed0020323 Sechium edule HOM05D001560 ORTHO05D004675 4.3e-87 325.5 169 91.7
BcaC09g49591 Brassica carinata HOM05D001560 ORTHO05D004675 5.6e-87 325.1 167 92.2
SabraMtG0007900 Salix brachista HOM05D001560 ORTHO05D004675 5.6e-87 325.1 170 91.2
CANSAT16G0009 Cannabis sativa HOM05D001560 ORTHO05D004675 9.5e-87 324.3 170 90.6
Solyc00g019950.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 1.2e-86 323.9 170 90.6
ECA039G0015 Erigeron canadensis HOM05D001560 ORTHO05D004675 2.8e-86 322.8 170 91.2
ECA039G0026 Erigeron canadensis HOM05D001560 ORTHO05D004675 2.8e-86 322.8 170 91.2
SHI35320 Sapria himalayana HOM05D001560 ORTHO05D004675 3.6e-86 322.4 170 90.6
unitig_87.g28016 Utricularia gibba HOM05D001560 ORTHO05D004675 4.7e-86 322.0 170 91.2
RcHm_v2.0_Chr6g0257991 Rosa chinensis HOM05D001560 ORTHO05D004675 8.1e-86 321.2 170 90.6
RcHm_v2.0_MTg0498881 Rosa chinensis HOM05D001560 ORTHO05D004675 8.1e-86 321.2 170 90.6
Migut.D01524 Erythranthe guttata HOM05D001560 ORTHO05D004675 2.3e-85 319.7 205 77.6
DCAR_031657 Daucus carota HOM05D001560 ORTHO05D004675 4.0e-85 318.9 168 91.1
DCAR_032439 Daucus carota HOM05D001560 ORTHO05D004675 4.0e-85 318.9 168 91.1
HanXRQChr00c0055g0571471 Helianthus annuus HOM05D001560 ORTHO05D004675 6.8e-85 318.2 170 90.0
HanXRQChr12g0358671 Helianthus annuus HOM05D001560 ORTHO05D004675 6.8e-85 318.2 170 90.0
HanXRQMTg0579651 Helianthus annuus HOM05D001560 ORTHO05D004675 6.8e-85 318.2 170 90.0
Dinv06677 Davidia involucrata HOM05D001560 ORTHO05D004675 1.5e-84 317.0 166 91.0
DCAR_032222 Daucus carota HOM05D001560 ORTHO05D004675 2.6e-84 316.2 168 90.5
Ah.02g118870 Amaranthus hybridus HOM05D001560 ORTHO05D004675 4.4e-84 315.5 167 89.2
Ah.10g027950 Amaranthus hybridus HOM05D001560 ORTHO05D004675 4.4e-84 315.5 167 89.2
MBI05_g23323_MAGBIO Magnolia biondii HOM05D001560 ORTHO05D004675 1.3e-83 313.9 170 88.8
Nn1g10115 Nelumbo nucifera HOM05D001560 ORTHO05D004675 3.7e-83 312.4 169 89.9
Medtr0212s0080 Medicago truncatula HOM05D001560 ORTHO05D004675 8.3e-83 311.2 167 88.0
Psat7g198960 Pisum sativum HOM05D001560 ORTHO05D004675 8.3e-83 311.2 167 88.0
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 5.4e-82 308.5 227 72.7
SHI43258 Sapria himalayana HOM05D001560 ORTHO05D004675 2.1e-81 306.6 212 76.9
SHI37161 Sapria himalayana HOM05D000743 ORTHO05D000580 2.7e-81 306.2 170 87.6
Ah.08g210720 Amaranthus hybridus HOM05D001560 ORTHO05D004675 6.0e-81 305.1 167 87.4
HanXRQChr02g0035261 Helianthus annuus HOM05D001560 ORTHO05D004675 7.8e-81 304.7 170 86.5
Zm00001eb382940 Zea mays HOM05D001560 ORTHO05D004675 5.1e-80 302.0 170 85.9
Cpa.g.sc38.8 Carica papaya HOM05D001560 ORTHO05D004675 6.6e-80 301.6 170 85.9
Ah.10g028660 Amaranthus hybridus HOM05D001560 ORTHO05D004675 1.9e-79 300.1 159 89.9
CDE02G0735 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 1.9e-79 300.1 168 86.3
SHI36139 Sapria himalayana HOM05D001560 ORTHO05D004675 3.3e-79 299.3 250 66.0
SHI54579 Sapria himalayana HOM05D001560 ORTHO05D004675 5.8e-76 288.5 139 99.3
SHI51556 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-75 287.3 144 95.8
Gorai.001G166700 Gossypium raimondii HOM05D007877 ORTHO05D009957 2.1e-73 280.0 144 92.4
Actinidia34872 Actinidia chinensis HOM05D001560 ORTHO05D004675 2.3e-72 276.6 167 82.6
SHI46062 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-71 274.2 143 92.3
Peaxi162Scf01588g00002 Petunia axillaris HOM05D001560 ORTHO05D004675 1.5e-71 273.9 170 78.8
SHI52730 Sapria himalayana HOM05D001560 ORTHO05D004675 1.9e-71 273.5 141 92.2
RhsimMtG0004600 Rhododendron simsii HOM05D001560 ORTHO05D004675 5.6e-71 271.9 141 92.9
RhsimMtG0006100 Rhododendron simsii HOM05D001560 ORTHO05D004675 5.6e-71 271.9 141 92.9
Hma1.2p1_1099F.1_g256790 Hydrangea macrophylla HOM05D001560 ORTHO05D004675 1.6e-70 270.4 144 90.3
Lsat_1_v5_gn_1_23980 Lactuca sativa HOM05D001560 ORTHO05D004675 3.6e-70 269.2 153 85.6
BolSC28t60305H Brassica oleracea HOM05D001560 ORTHO05D004675 1.8e-69 266.9 163 79.1
ECA238G3729 Erigeron canadensis HOM05D001560 ORTHO05D004675 2.0e-68 263.5 135 93.3
SHI35288 Sapria himalayana HOM05D001560 ORTHO05D004675 4.9e-67 258.8 288 53.5
SHI53284 Sapria himalayana HOM05D001560 ORTHO05D004675 1.4e-66 257.3 137 91.2
Lalb_Chr00c21g0406161 Lupinus albus HOM05D001560 ORTHO05D004675 4.2e-66 255.8 170 76.5
SHI39097 Sapria himalayana HOM05D001560 ORTHO05D004675 7.1e-66 255.0 299 52.2
SHI36570 Sapria himalayana HOM05D001560 ORTHO05D004675 6.6e-64 248.4 178 75.8
SHI26652 Sapria himalayana HOM05D001560 ORTHO05D004675 2.8e-62 243.0 229 60.3
SHI53856 Sapria himalayana HOM05D001560 ORTHO05D004675 3.6e-62 242.7 139 87.8
SHI36269 Sapria himalayana HOM05D001560 ORTHO05D004675 4.5e-60 235.7 256 55.9
SHI50434 Sapria himalayana HOM05D001560 ORTHO05D004675 2.9e-59 233.0 133 87.2
HanXRQChr10g0297171 Helianthus annuus HOM05D001560 ORTHO05D004675 3.8e-59 232.6 172 72.1
SHI39080 Sapria himalayana HOM05D001560 ORTHO05D004675 4.9e-59 232.3 134 86.6
CsaV3_5G015950 Cucumis sativus L. HOM05D001560 ORTHO05D004675 1.4e-58 230.7 130 87.7
SHI35332 Sapria himalayana HOM05D001560 ORTHO05D004675 9.3e-58 228.0 114 94.7
SHI36775 Sapria himalayana HOM05D001560 ORTHO05D004675 3.4e-52 209.5 223 54.7
SHI36786 Sapria himalayana HOM05D001560 ORTHO05D004675 3.4e-52 209.5 223 54.7
SHI42241 Sapria himalayana HOM05D001560 ORTHO05D004675 2.9e-51 206.5 115 88.7
Sopen00g002540 Solanum pennellii HOM05D001560 ORTHO05D004675 2.4e-50 203.4 114 86.8
ECA041G0003 Erigeron canadensis HOM05D001560 ORTHO05D004675 5.5e-50 202.2 109 89.0
CARHR287160 Cardamine hirsuta HOM05D001560 ORTHO05D004675 1.2e-49 201.1 99 94.9
arahy.Tifrunner.gnm1.ann1.11DKXG Arachis hypogaea HOM05D001560 ORTHO05D004675 7.9e-49 198.4 100 93.0
BolC1t03442H Brassica oleracea HOM05D001560 ORTHO05D004675 7.9e-49 198.4 132 76.5
SHI49835 Sapria himalayana HOM05D001560 ORTHO05D004675 6.7e-48 195.3 197 58.4
SHI50380 Sapria himalayana HOM05D001560 ORTHO05D004675 6.7e-48 195.3 197 58.4
Haze_26224 Corylus avellana HOM05D001560 ORTHO05D004675 1.1e-47 194.5 149 59.7
Dinv29327 Davidia involucrata HOM05D001560 ORTHO05D004675 1.1e-47 194.5 99 92.9
C01p34750 Brassica napus HOM05D001560 ORTHO05D004675 2.5e-47 193.4 132 75.8
arahy.Tifrunner.gnm1.ann1.E4X7TI Arachis hypogaea HOM05D001560 ORTHO05D004675 4.3e-47 192.6 97 92.8
Cre07.g327400 Chlamydomonas reinhardtii HOM05D001560 ORTHO05D004675 4.3e-47 192.6 153 58.8
Ca_22175_v3 Cicer arietinum L. HOM05D001560 ORTHO05D004675 7.4e-47 191.8 96 93.8
Solyc08g065620.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 1.3e-46 191.0 101 88.1
CDE02G2746 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 8.1e-46 188.3 103 87.4
BraSC177t45760Z Brassica rapa HOM05D001560 ORTHO05D004675 1.2e-44 184.5 115 79.1
SHI37068 Sapria himalayana HOM05D001560 ORTHO05D004675 3.2e-42 176.4 170 57.1
PGSC0003DMG400018984 Solanum tuberosum HOM05D001560 ORTHO05D004675 1.2e-41 174.5 99 84.8
Solyc03g061560.3 Solanum lycopersicum HOM05D001560 ORTHO05D004675 4.6e-41 172.6 101 81.2
BraSC48t46227Z Brassica rapa HOM05D001560 ORTHO05D004675 1.8e-40 170.6 111 78.4
Nitab4.5_0001152g0360 Nicotiana tabacum HOM05D001560 ORTHO05D004675 2.3e-40 170.2 127 68.5
Os12g0422971 Oryza sativa ssp. japonica HOM05D001560 ORTHO05D004675 6.3e-38 162.2 87 89.7
TPR.G40193 Trifolium pratense HOM05D001560 ORTHO05D004675 2.4e-37 160.2 79 92.4
Sc13g0007750 Simmondsia chinensis HOM05D001560 ORTHO05D004675 5.3e-37 159.1 166 54.2
SHI54988 Sapria himalayana HOM05D001560 ORTHO05D004675 7.6e-36 155.2 75 98.7
SHI36375 Sapria himalayana HOM05D001560 ORTHO05D004675 1.9e-34 150.6 74 94.6
SHI38033 Sapria himalayana HOM05D001560 ORTHO05D004675 4.2e-34 149.4 74 94.6
Nitab4.5_0001152g0390 Nicotiana tabacum HOM05D001560 ORTHO05D004675 5.5e-34 149.1 91 78.0
SHI40902 Sapria himalayana HOM05D001560 ORTHO05D004675 5.5e-34 149.1 74 93.2
SHI36081 Sapria himalayana HOM05D001560 ORTHO05D004675 7.2e-34 148.7 74 93.2
SHI39123 Sapria himalayana HOM05D001560 ORTHO05D004675 7.2e-34 148.7 74 93.2
SHI36939 Sapria himalayana HOM05D001560 ORTHO05D004675 4.6e-33 146.0 72 94.4
SHI36627 Sapria himalayana HOM05D001560 ORTHO05D004675 1.0e-32 144.8 70 95.7
SHI43451 Sapria himalayana HOM05D001560 ORTHO05D004675 1.0e-32 144.8 74 91.9
CAN.G134.23 Capsicum annuum HOM05D001560 ORTHO05D004675 3.9e-32 142.9 74 90.5
Gohir.A03G134200 Gossypium hirsutum HOM05D001560 ORTHO05D004675 3.9e-32 142.9 74 90.5
SHI34635 Sapria himalayana HOM05D001560 ORTHO05D004675 3.9e-32 142.9 72 91.7
Manes.01G049495 Manihot esculenta HOM05D001560 ORTHO05D004675 8.7e-32 141.7 74 87.8
SHI38213 Sapria himalayana HOM05D001560 ORTHO05D004675 1.9e-31 140.6 74 90.5
Zm00001eb436070 Zea mays HOM05D001560 ORTHO05D004675 2.5e-31 140.2 74 89.2
Zm00001eb440310 Zea mays HOM05D001560 ORTHO05D004675 2.5e-31 140.2 74 89.2
Zm00001eb440380 Zea mays HOM05D001560 ORTHO05D004675 2.5e-31 140.2 74 89.2
Zm00001eb442180 Zea mays HOM05D001560 ORTHO05D004675 2.5e-31 140.2 74 89.2
SHI34631 Sapria himalayana HOM05D001560 ORTHO05D004675 4.3e-31 139.4 74 90.5
Solyc08g029250.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 5.7e-31 139.0 143 54.5
SHI27346 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-30 137.9 71 91.5
SHI38099 Sapria himalayana HOM05D001560 ORTHO05D004675 8.2e-30 135.2 74 87.8
AUR62042344 Chenopodium quinoa HOM05D001560 ORTHO05D004675 1.4e-29 134.4 71 87.3
SMO053G0006 Selaginella moellendorffii HOM05D001560 ORTHO05D004675 2.0e-28 130.6 143 47.6
Nitab4.5_0013170g0020 Nicotiana tabacum HOM05D001560 ORTHO05D004675 2.6e-28 130.2 72 84.7
Nitab4.5_0001127g0220 Nicotiana tabacum HOM05D001560 ORTHO05D004675 3.8e-27 126.3 74 79.7
TPR.G15690 Trifolium pratense HOM05D001560 ORTHO05D004675 1.1e-26 124.8 64 93.8
Solyc01g020470.3 Solanum lycopersicum HOM05D001560 ORTHO05D004675 4.2e-26 122.9 122 54.1
SHI34998 Sapria himalayana HOM05D001560 ORTHO05D003613 5.5e-26 122.5 111 65.8
TPR.G20383 Trifolium pratense HOM05D001560 ORTHO05D004675 4.6e-25 119.4 67 82.1
SHI33106 Sapria himalayana HOM05D000743 ORTHO05D000580 5.1e-24 115.9 60 95.0
PGSC0003DMG400020882 Solanum tuberosum HOM05D001560 ORTHO05D004675 2.8e-22 110.2 69 78.3
Prupe.2G039100 Prunus persica HOM05D001560 ORTHO05D004675 1.2e-20 104.8 61 86.9
Nitab4.5_0000661g0100 Nicotiana tabacum HOM05D001560 ORTHO05D004675 5.9e-20 102.4 64 76.6
SHI35323 Sapria himalayana HOM05D001560 ORTHO05D004675 8.5e-19 98.6 58 82.8
Manes.01G049510 Manihot esculenta HOM05D001560 ORTHO05D004675 5.5e-18 95.9 47 89.4
SHI44216 Sapria himalayana HOM05D001560 ORTHO05D004675 9.4e-18 95.1 69 69.6
CsaV3_5G015880 Cucumis sativus L. HOM05D001560 ORTHO05D004675 1.5e-15 87.8 49 81.6
Nitab4.5_0019346g0010 Nicotiana tabacum HOM05D001560 ORTHO05D004675 6.3e-14 82.4 44 86.4
SHI38481 Sapria himalayana HOM05D001560 ORTHO05D004675 4.1e-13 79.7 100 51.0
Nitab4.5_0001152g0580 Nicotiana tabacum HOM05D001560 ORTHO05D004675 6.5e-11 72.4 50 68.0
SHI33107 Sapria himalayana HOM05D001560 ORTHO05D004675 1.5e-10 71.2 48 72.9
C01p34850 Brassica napus HOM05D001560 ORTHO05D004675 2.5e-10 70.5 36 86.1
DCAR_022732 Daucus carota HOM05D001560 ORTHO05D004675 1.8e-08 64.3 34 82.4
Nitab4.5_0003709g0080 Nicotiana tabacum HOM05D012582 ORTHO05D011721 5.2e-08 62.8 30 93.3
BraSC48t46315Z Brassica rapa HOM05D001560 ORTHO05D004675 2.6e-07 60.5 29 86.2
EL10Ac7g17432 Beta vulgaris HOM05D001560 ORTHO05D004675 2.8e-06 57.0 35 74.3


User provided reference genes

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