Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI50902 Sapria himalayana HOM05D010923 ORTHO05D003989 2.9e-44 181.4 86 100.0
SHI36351 Sapria himalayana HOM05D010923 ORTHO05D003989 8.0e-34 146.7 77 92.2
SHI36761 Sapria himalayana HOM05D010923 ORTHO05D003989 2.3e-25 118.6 86 73.3
SHI35822 Sapria himalayana HOM05D010923 ORTHO05D003989 1.5e-24 115.9 77 75.3
SHI42924 Sapria himalayana HOM05D010923 ORTHO05D003989 2.6e-24 115.2 77 75.3
SHI40238 Sapria himalayana HOM05D010923 ORTHO05D003989 1.2e-21 106.3 70 77.1
SHI49839 Sapria himalayana HOM05D010923 ORTHO05D003989 2.7e-21 105.1 81 69.1
SHI42703 Sapria himalayana HOM05D000849 ORTHO05D003989 5.5e-19 97.4 80 68.8
SHI35683 Sapria himalayana HOM05D000558 ORTHO05D001857 3.6e-18 94.7 62 72.6
SHI46441 Sapria himalayana HOM05D010923 ORTHO05D003989 8.0e-18 93.6 59 81.4
SHI43902 Sapria himalayana HOM05D010923 ORTHO05D003989 2.3e-17 92.0 48 91.7
SHI44502 Sapria himalayana HOM05D010923 ORTHO05D003989 2.3e-17 92.0 48 91.7
SHI47575 Sapria himalayana HOM05D010923 ORTHO05D003989 2.3e-17 92.0 48 91.7
SHI48148 Sapria himalayana HOM05D010923 ORTHO05D003989 2.3e-17 92.0 48 91.7
SHI37256 Sapria himalayana HOM05D010923 ORTHO05D001219 5.2e-17 90.9 78 62.8
SHI23604 Sapria himalayana HOM05D000849 ORTHO05D003989 1.2e-16 89.7 47 87.2
SHI51537 Sapria himalayana HOM05D000849 ORTHO05D003989 2.4e-14 82.0 38 94.7
SHI38667 Sapria himalayana HOM05D000849 ORTHO05D003989 1.6e-10 69.3 38 84.2
SHI47843 Sapria himalayana HOM05D000849 ORTHO05D003989 1.0e-09 66.6 37 78.4
SHI52725 Sapria himalayana HOM05D000849 ORTHO05D003989 1.5e-08 62.8 30 93.3
SHI46084 Sapria himalayana HOM05D000849 ORTHO05D003989 2.0e-08 62.4 37 78.4
SHI20141 Sapria himalayana HOM05D000849 ORTHO05D003989 4.4e-08 61.2 38 73.7
SHI33029 Sapria himalayana HOM05D000849 ORTHO05D003989 5.7e-08 60.8 29 89.7
SHI50198 Sapria himalayana HOM05D000849 ORTHO05D003989 5.7e-08 60.8 38 73.7
SHI52555 Sapria himalayana HOM05D000849 ORTHO05D003989 5.7e-08 60.8 29 89.7
SHI53623 Sapria himalayana HOM05D000849 ORTHO05D003989 5.7e-08 60.8 29 89.7
SHI34965 Sapria himalayana HOM05D000849 ORTHO05D003989 7.5e-08 60.5 32 81.2
SHI53541 Sapria himalayana HOM05D000849 ORTHO05D003989 2.2e-07 58.9 45 62.2
SHI53653 Sapria himalayana HOM05D000849 ORTHO05D003989 2.2e-07 58.9 45 62.2
Manes.16G106500 Manihot esculenta HOM05D000849 ORTHO05D003989 2.8e-07 58.5 74 44.6
Sabra06G0117900 Salix brachista HOM05D000849 ORTHO05D003989 2.8e-07 58.5 74 44.6
Duzib187G0631 Durio zibethinus HOM05D000849 ORTHO05D003989 3.7e-07 58.2 74 44.6
Gohir.A05G027200 Gossypium hirsutum HOM05D000849 ORTHO05D003989 3.7e-07 58.2 74 44.6
Gohir.A13G194600 Gossypium hirsutum HOM05D000849 ORTHO05D003989 3.7e-07 58.2 74 44.6
Gohir.D05G029100 Gossypium hirsutum HOM05D000849 ORTHO05D003989 3.7e-07 58.2 74 44.6
Gohir.D13G200300 Gossypium hirsutum HOM05D000849 ORTHO05D003989 3.7e-07 58.2 74 44.6
Gorai.009G029200 Gossypium raimondii HOM05D000849 ORTHO05D003989 3.7e-07 58.2 74 44.6
Gorai.013G229100 Gossypium raimondii HOM05D000849 ORTHO05D003989 3.7e-07 58.2 74 44.6
Potri.006G149100 Populus trichocarpa HOM05D000849 ORTHO05D003989 3.7e-07 58.2 74 43.2
SHI03952 Sapria himalayana HOM05D000849 ORTHO05D003989 3.7e-07 58.2 38 68.4
TWI63G0367 Tripterygium wilfordii HOM05D000849 ORTHO05D003989 3.7e-07 58.2 74 44.6
Atru.chr7.1508 Acer truncatum HOM05D000849 ORTHO05D003989 4.9e-07 57.8 74 44.6
Aa31LG8G16770 Aethionema arabicum HOM05D000849 ORTHO05D003989 4.9e-07 57.8 74 44.6
Cpa.g.sc78.44 Carica papaya HOM05D000849 ORTHO05D003989 4.9e-07 57.8 74 44.6
Ciclev10009831m.g Citrus clementina HOM05D000849 ORTHO05D003989 4.9e-07 57.8 74 44.6
Duzib150G0327 Durio zibethinus HOM05D000849 ORTHO05D003989 4.9e-07 57.8 74 44.6
Manes.03G029400 Manihot esculenta HOM05D000849 ORTHO05D003989 4.9e-07 57.8 74 43.2
THA.LOC104820037 Tarenaya hassleriana HOM05D000849 ORTHO05D003989 4.9e-07 57.8 74 44.6
Thecc.09G096900 Theobroma cacao HOM05D000849 ORTHO05D003989 4.9e-07 57.8 74 44.6
THA.LOC104814582 Tarenaya hassleriana HOM05D000849 ORTHO05D003989 8.3e-07 57.0 74 43.2
AL3G48440 Arabidopsis lyrata HOM05D000849 ORTHO05D003989 1.1e-06 56.6 74 43.2
AT2G19790 Arabidopsis thaliana HOM05D000849 ORTHO05D003989 1.1e-06 56.6 74 43.2
BolC7t40613H Brassica oleracea HOM05D000849 ORTHO05D003989 1.1e-06 56.6 74 43.2
Carub.0003s3407 Capsella rubella HOM05D000849 ORTHO05D003989 1.1e-06 56.6 74 43.2
CARHR110250 Cardamine hirsuta HOM05D000849 ORTHO05D003989 1.1e-06 56.6 74 43.2
Sp3g33140 Schrenkiella parvula HOM05D000849 ORTHO05D003989 1.1e-06 56.6 74 43.2
Cc06_g10770 Coffea canephora HOM05D000849 ORTHO05D003989 1.4e-06 56.2 74 45.9
BcaB03g16769 Brassica carinata HOM05D000849 ORTHO05D003989 1.8e-06 55.8 74 43.2
BcaC06g36622 Brassica carinata HOM05D000849 ORTHO05D003989 1.8e-06 55.8 74 43.2
A07p00920 Brassica napus HOM05D000849 ORTHO05D003989 1.8e-06 55.8 74 43.2
C07p02080 Brassica napus HOM05D000849 ORTHO05D003989 1.8e-06 55.8 74 43.2
BraA07t27892Z Brassica rapa HOM05D000849 ORTHO05D003989 1.8e-06 55.8 74 43.2
ECA236G3815 Erigeron canadensis HOM05D000849 ORTHO05D003989 1.8e-06 55.8 74 44.6
FAN28G0398 Fragaria x ananassa HOM05D000849 ORTHO05D003989 1.8e-06 55.8 74 43.2
Lsat_1_v5_gn_8_88280 Lactuca sativa HOM05D000849 ORTHO05D003989 1.8e-06 55.8 74 44.6
MD02G1069000 Malus domestica HOM05D000849 ORTHO05D003989 1.8e-06 55.8 74 43.2
Nitab4.5_0004180g0010 Nicotiana tabacum HOM05D000849 ORTHO05D003989 1.8e-06 55.8 74 44.6
RcHm_v2.0_Chr2g0092321 Rosa chinensis HOM05D000849 ORTHO05D003989 1.8e-06 55.8 74 43.2
SHI43352 Sapria himalayana HOM05D010923 ORTHO05D003989 1.8e-06 55.8 34 67.6
vmacro06264 Vaccinium macrocarpon HOM05D000849 ORTHO05D003989 1.8e-06 55.8 74 44.6
Actinidia29881 Actinidia chinensis HOM05D000849 ORTHO05D003989 2.4e-06 55.5 74 44.6
MSTRG.19541 Avicennia marina HOM05D000849 ORTHO05D003989 2.4e-06 55.5 74 43.2
BcaC04g22820 Brassica carinata HOM05D000849 ORTHO05D003989 2.4e-06 55.5 74 41.9
A09p12580 Brassica napus HOM05D000849 ORTHO05D003989 2.4e-06 55.5 74 41.9
C09p14940 Brassica napus HOM05D000849 ORTHO05D003989 2.4e-06 55.5 74 41.9
BolC9t54396H Brassica oleracea HOM05D000849 ORTHO05D003989 2.4e-06 55.5 74 41.9
BraA09t36905Z Brassica rapa HOM05D000849 ORTHO05D003989 2.4e-06 55.5 74 41.9
Haze_25852 Corylus avellana HOM05D000849 ORTHO05D003989 2.4e-06 55.5 74 44.6
Dinv42272 Davidia involucrata HOM05D000849 ORTHO05D003989 2.4e-06 55.5 74 44.6
FvH4_1g06580 Fragaria vesca HOM05D000849 ORTHO05D003989 2.4e-06 55.5 74 41.9
FAN19G1758 Fragaria x ananassa HOM05D000849 ORTHO05D003989 2.4e-06 55.5 74 41.9
FAN26G0314 Fragaria x ananassa HOM05D000849 ORTHO05D003989 2.4e-06 55.5 74 41.9
FAN26G0318 Fragaria x ananassa HOM05D000849 ORTHO05D003989 2.4e-06 55.5 74 41.9
Oeu036246.1 Olea europaea HOM05D000849 ORTHO05D003989 2.4e-06 55.5 74 44.6
Peaxi162Scf00298g00114 Petunia axillaris HOM05D000849 ORTHO05D003989 2.4e-06 55.5 74 44.6
Prupe.7G216600 Prunus persica HOM05D000849 ORTHO05D003989 2.4e-06 55.5 74 43.2
SalBow6G5864 Salvia bowleyana HOM05D000849 ORTHO05D003989 2.4e-06 55.5 74 44.6
CSS0012070 Camellia sinensis var. sinensis HOM05D000849 ORTHO05D003989 3.1e-06 55.1 74 44.6
Migut.K00562 Erythranthe guttata HOM05D000849 ORTHO05D003989 3.1e-06 55.1 74 43.2
Sed0020746 Sechium edule HOM05D000849 ORTHO05D003989 3.1e-06 55.1 74 43.2
CAN.G1058.10 Capsicum annuum HOM05D000849 ORTHO05D003989 4.1e-06 54.7 74 43.2
CiPaw.04G154300 Carya illinoinensis HOM05D000849 ORTHO05D003989 4.1e-06 54.7 74 43.2
MD15G1200600 Malus domestica HOM05D000849 ORTHO05D003989 4.1e-06 54.7 74 43.2
QL02p086970 Quercus lobata HOM05D000849 ORTHO05D003989 4.1e-06 54.7 74 43.2
unitig_26.g9704 Utricularia gibba HOM05D000849 ORTHO05D003989 4.1e-06 54.7 74 43.2
HPP92_024117 Vanilla planifolia HOM05D000849 ORTHO05D003989 4.1e-06 54.7 74 43.2
Ah.09g230330 Amaranthus hybridus HOM05D000849 ORTHO05D003989 5.4e-06 54.3 74 43.2
Aqoxy7G01359 Aquilegia oxysepala HOM05D000849 ORTHO05D003989 5.4e-06 54.3 74 43.2
EL10Ac8g18347 Beta vulgaris HOM05D000849 ORTHO05D003989 5.4e-06 54.3 74 43.2
CiPaw.03G221100 Carya illinoinensis HOM05D000849 ORTHO05D003989 5.4e-06 54.3 74 43.2
Eucgr.C00951 Eucalyptus grandis HOM05D000849 ORTHO05D003989 5.4e-06 54.3 74 43.2
Hma1.2p1_0663F.1_g198540 Hydrangea macrophylla HOM05D000849 ORTHO05D003989 5.4e-06 54.3 83 38.6
PGR142G0605 Punica granatum HOM05D000849 ORTHO05D003989 5.4e-06 54.3 74 43.2
SHI52623 Sapria himalayana HOM05D000849 ORTHO05D003989 5.4e-06 54.3 28 85.7
SGA_v2.0_scaffold279G46782 Striga asiatica HOM05D000849 ORTHO05D003989 5.4e-06 54.3 74 41.9
SGA_v2.0_scaffold302G47808 Striga asiatica HOM05D000849 ORTHO05D003989 5.4e-06 54.3 74 41.9
HPP92_009846 Vanilla planifolia HOM05D000849 ORTHO05D003989 5.4e-06 54.3 74 43.2
Pp3c14_14670 Physcomitrium patens HOM05D000849 ORTHO05D003989 7.0e-06 53.9 74 41.9
Actinidia17501 Actinidia chinensis HOM05D000849 ORTHO05D003989 9.2e-06 53.5 74 43.2
MSTRG.6030 Avicennia marina HOM05D000849 ORTHO05D003989 9.2e-06 53.5 74 40.5
AUR62033272 Chenopodium quinoa HOM05D000849 ORTHO05D003989 9.2e-06 53.5 74 41.9
Mapoly0016s0005 Marchantia polymorpha HOM05D000849 ORTHO05D003989 9.2e-06 53.5 74 41.9
Solyc05g026130.3 Solanum lycopersicum HOM05D000849 ORTHO05D003989 9.2e-06 53.5 74 43.2
Sopen05g022340 Solanum pennellii HOM05D000849 ORTHO05D003989 9.2e-06 53.5 74 43.2
PGSC0003DMG400028942 Solanum tuberosum HOM05D000849 ORTHO05D003989 9.2e-06 53.5 74 43.2


User provided reference genes

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