Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI50603 Sapria himalayana HOM05D004911 ORTHO05D005930 3.5e-109 398.3 200 100.0
SHI34912 Sapria himalayana HOM05D004911 ORTHO05D005930 1.4e-70 270.0 164 81.1
SHI04173 Sapria himalayana HOM05D004911 ORTHO05D005930 2.2e-63 246.1 204 63.2
SHI45052 Sapria himalayana HOM05D004911 ORTHO05D005930 8.5e-63 244.2 165 77.6
SHI38855 Sapria himalayana HOM05D004911 ORTHO05D005930 3.5e-56 222.2 198 61.1
SHI49274 Sapria himalayana HOM05D004911 ORTHO05D005930 2.5e-54 216.1 191 62.3
SHI42568 Sapria himalayana HOM05D004911 ORTHO05D005930 3.4e-51 205.7 166 63.9
SHI39007 Sapria himalayana HOM05D004911 ORTHO05D005930 3.7e-50 202.2 182 59.9
SHI52879 Sapria himalayana HOM05D004911 ORTHO05D005930 1.1e-41 174.1 101 84.2
SHI45395 Sapria himalayana HOM05D004911 ORTHO05D005930 4.3e-38 162.2 149 58.4
SHI45716 Sapria himalayana HOM05D004911 ORTHO05D005930 4.3e-38 162.2 149 58.4
SHI50333 Sapria himalayana HOM05D004911 ORTHO05D005930 2.6e-35 152.9 142 59.2
Manes.03G080800 Manihot esculenta HOM05D004911 ORTHO05D005930 5.8e-35 151.8 227 41.9
Rhsim09G0072200 Rhododendron simsii HOM05D004911 ORTHO05D005930 5.8e-35 151.8 211 43.1
SHI47273 Sapria himalayana HOM05D004911 ORTHO05D005930 1.3e-34 150.6 137 59.1
Ciclev10030563m.g Citrus clementina HOM05D004911 ORTHO05D005930 3.7e-34 149.1 211 42.7
VMungo1215G1051 Vigna mungo HOM05D004911 ORTHO05D005930 8.3e-34 147.9 215 41.4
TWI53G1120 Tripterygium wilfordii HOM05D004911 ORTHO05D005930 1.1e-33 147.5 211 40.3
CSS0020868 Camellia sinensis var. sinensis HOM05D004911 ORTHO05D005930 4.1e-33 145.6 212 41.0
vmacro16011 Vaccinium macrocarpon HOM05D004911 ORTHO05D005930 4.1e-33 145.6 211 42.2
PSO063G3537 Papaver somniferum HOM05D004911 ORTHO05D005930 1.2e-32 144.1 212 40.6
PSO782G1502 Papaver somniferum HOM05D004911 ORTHO05D005930 2.0e-32 143.3 212 40.6
Atru.chr11.1224 Acer truncatum HOM05D004911 ORTHO05D005930 2.7e-32 142.9 211 41.7
DCAR_023433 Daucus carota HOM05D004911 ORTHO05D005930 2.7e-32 142.9 217 41.5
Psat7g173880 Pisum sativum HOM05D004911 ORTHO05D005930 2.7e-32 142.9 210 41.0
Hma1.2p1_0183F.1_g081060 Hydrangea macrophylla HOM05D004911 ORTHO05D005930 3.5e-32 142.5 214 41.1
Lj3g0004396 Lotus japonicus HOM05D004911 ORTHO05D005930 6.0e-32 141.7 210 41.0
Glyma.12G027900 Glycine max HOM05D004911 ORTHO05D005930 1.0e-31 141.0 212 40.6
Hma1.2p1_0183F.1_g081050 Hydrangea macrophylla HOM05D004911 ORTHO05D005930 1.0e-31 141.0 203 41.4
Cfa008718 Carpinus fangiana HOM05D004911 ORTHO05D005930 1.3e-31 140.6 211 40.8
Haze_11728 Corylus avellana HOM05D004911 ORTHO05D005930 1.3e-31 140.6 211 40.8
Dinv12051 Davidia involucrata HOM05D004911 ORTHO05D005930 1.3e-31 140.6 210 40.5
Lalb_Chr19g0139351 Lupinus albus HOM05D004911 ORTHO05D005930 1.3e-31 140.6 210 41.0
QL03p043438 Quercus lobata HOM05D004911 ORTHO05D005930 1.3e-31 140.6 218 40.8
TAR371G0035 Trochodendron aralioides HOM05D004911 ORTHO05D005930 1.3e-31 140.6 211 40.8
Carub.0003s1976 Capsella rubella HOM05D004911 ORTHO05D005930 2.3e-31 139.8 214 41.1
GSVIVG01010210001 Vitis vinifera HOM05D004911 ORTHO05D005930 2.3e-31 139.8 211 40.8
CiPaw.05G166600 Carya illinoinensis HOM05D004911 ORTHO05D005930 3.0e-31 139.4 217 40.6
AT3G19870 Arabidopsis thaliana HOM05D004911 ORTHO05D005930 3.9e-31 139.0 214 40.7
A01p34870 Brassica napus HOM05D004911 ORTHO05D005930 3.9e-31 139.0 210 42.4
BraA01t03570Z Brassica rapa HOM05D004911 ORTHO05D005930 3.9e-31 139.0 210 42.4
Ca_25607_v3 Cicer arietinum L. HOM05D004911 ORTHO05D005930 5.0e-31 138.7 210 40.0
MD07G1172300 Malus domestica HOM05D004911 ORTHO05D005930 5.0e-31 138.7 217 39.6
Potri.008G085300 Populus trichocarpa HOM05D004911 ORTHO05D005930 5.0e-31 138.7 211 42.2
Thhalv10019942m.g Eutrema salsugineum HOM05D004911 ORTHO05D005930 6.6e-31 138.3 214 41.6
Phvul.002G058701 Phaseolus vulgaris HOM05D004911 ORTHO05D005930 6.6e-31 138.3 211 40.3
Actinidia04316 Actinidia chinensis HOM05D004911 ORTHO05D005930 8.6e-31 137.9 215 41.4
BcaC09g48939 Brassica carinata HOM05D004911 ORTHO05D005930 8.6e-31 137.9 189 44.4
Nn3g18681 Nelumbo nucifera HOM05D004911 ORTHO05D005930 8.6e-31 137.9 211 38.9
Nitab4.5_0000562g0030 Nicotiana tabacum HOM05D004911 ORTHO05D005930 8.6e-31 137.9 222 38.3
Sabra08G0063200 Salix brachista HOM05D004911 ORTHO05D005930 1.1e-30 137.5 211 41.7
CARHR095390 Cardamine hirsuta HOM05D004911 ORTHO05D005930 1.5e-30 137.1 215 41.4
MBI03_g33919_MAGBIO Magnolia biondii HOM05D004911 ORTHO05D005930 1.9e-30 136.7 211 39.3
PGSC0003DMG400029831 Solanum tuberosum HOM05D004911 ORTHO05D005930 1.9e-30 136.7 226 38.5
AL3G33410 Arabidopsis lyrata HOM05D004911 ORTHO05D005930 2.5e-30 136.3 214 40.2
SalBow2G3529 Salvia bowleyana HOM05D004911 ORTHO05D005930 2.5e-30 136.3 210 37.6
Solyc10g079850.2 Solanum lycopersicum HOM05D004911 ORTHO05D005930 2.5e-30 136.3 226 38.1
ECA246G1490 Erigeron canadensis HOM05D004911 ORTHO05D005930 4.3e-30 135.6 215 37.7
Nitab4.5_0000677g0060 Nicotiana tabacum HOM05D004911 ORTHO05D005930 4.3e-30 135.6 213 38.0
CAN.G1656.8 Capsicum annuum HOM05D004911 ORTHO05D005930 5.6e-30 135.2 222 38.7
Medtr4g074460 Medicago truncatula HOM05D004911 ORTHO05D005930 5.6e-30 135.2 210 40.0
arahy.Tifrunner.gnm1.ann1.Q7DFN3 Arachis hypogaea HOM05D004911 ORTHO05D005930 7.3e-30 134.8 210 40.0
Migut.H02310 Erythranthe guttata HOM05D004911 ORTHO05D005930 7.3e-30 134.8 223 35.9
Glyma.11G102800 Glycine max HOM05D004911 ORTHO05D005930 7.3e-30 134.8 212 39.6
ClCG01G007110 Citrullus lanatus HOM05D004911 ORTHO05D005930 1.2e-29 134.0 221 38.0
FAN10G1537 Fragaria x ananassa HOM05D004911 ORTHO05D005930 1.2e-29 134.0 211 40.3
Lj3C852G13 Lonicera japonica HOM05D004911 ORTHO05D005930 1.2e-29 134.0 217 38.2
FAN10G0928 Fragaria x ananassa HOM05D004911 ORTHO05D005930 1.6e-29 133.7 211 40.3
Sopen10g030460 Solanum pennellii HOM05D004911 ORTHO05D005930 2.1e-29 133.3 226 37.6
C01p44300 Brassica napus HOM05D004911 ORTHO05D005930 2.8e-29 132.9 210 41.0
BolC1t04393H Brassica oleracea HOM05D004911 ORTHO05D005930 2.8e-29 132.9 210 41.0
Peaxi162Scf01315g00114 Petunia axillaris HOM05D004911 ORTHO05D005930 2.8e-29 132.9 222 36.9
Cpa.g.sc63.15 Carica papaya HOM05D004911 ORTHO05D005930 4.7e-29 132.1 216 38.9
Eucgr.J00848 Eucalyptus grandis HOM05D004911 ORTHO05D005930 4.7e-29 132.1 210 37.6
Thecc.02G295700 Theobroma cacao HOM05D004911 ORTHO05D005930 4.7e-29 132.1 218 37.6
Aqoxy3G04281 Aquilegia oxysepala HOM05D004911 ORTHO05D005930 6.2e-29 131.7 211 38.4
FAN01G1211 Fragaria x ananassa HOM05D004911 ORTHO05D005930 6.2e-29 131.7 211 40.8
MD01G1105900 Malus domestica HOM05D004911 ORTHO05D005930 6.2e-29 131.7 218 38.5
RcHm_v2.0_Chr1g0362961 Rosa chinensis HOM05D004911 ORTHO05D005930 8.0e-29 131.3 211 38.9
EL10Ac9g22915 Beta vulgaris HOM05D004911 ORTHO05D005930 1.8e-28 130.2 212 38.2
Gohir.A04G143200 Gossypium hirsutum HOM05D004911 ORTHO05D005930 2.3e-28 129.8 220 35.9
CANSAT56G0121 Cannabis sativa HOM05D004911 ORTHO05D005930 3.1e-28 129.4 212 40.6
Duzib251G0593 Durio zibethinus HOM05D004911 ORTHO05D005930 3.1e-28 129.4 211 36.5
Gohir.D04G186500 Gossypium hirsutum HOM05D004911 ORTHO05D005930 3.1e-28 129.4 220 35.9
SGA_v2.0_scaffold80G25956 Striga asiatica HOM05D004911 ORTHO05D005930 3.1e-28 129.4 213 35.7
COL.COLO4_16624 Corchorus olitorius HOM05D004911 ORTHO05D005930 4.0e-28 129.0 218 36.2
Prupe.2G211300 Prunus persica HOM05D004911 ORTHO05D005930 4.0e-28 129.0 215 37.7
PGR044G1924 Punica granatum HOM05D004911 ORTHO05D005930 4.0e-28 129.0 217 36.4
FvH4_7g19060 Fragaria vesca HOM05D004911 ORTHO05D005930 5.2e-28 128.6 215 38.6
FAN03G1024 Fragaria x ananassa HOM05D004911 ORTHO05D005930 5.2e-28 128.6 211 39.8
FAN06G1517 Fragaria x ananassa HOM05D004911 ORTHO05D005930 5.2e-28 128.6 215 38.6
FAN06G4750 Fragaria x ananassa HOM05D004911 ORTHO05D005930 5.2e-28 128.6 215 38.6
Sp3g17890 Schrenkiella parvula HOM05D004911 ORTHO05D005930 5.2e-28 128.6 210 39.5
Sed0025480 Sechium edule HOM05D004911 ORTHO05D005930 5.2e-28 128.6 219 36.5
Gorai.012G182900 Gossypium raimondii HOM05D004911 ORTHO05D005930 1.2e-27 127.5 220 35.9
CDE05G0535 Ceratophyllum demersum HOM05D004911 ORTHO05D005930 2.6e-27 126.3 207 39.1
HanXRQChr06g0175521 Helianthus annuus HOM05D004911 ORTHO05D005930 2.6e-27 126.3 213 38.0
THA.LOC104809147 Tarenaya hassleriana HOM05D004911 ORTHO05D005930 4.4e-27 125.6 246 37.0
Lsat_1_v5_gn_0_9321 Lactuca sativa HOM05D004911 ORTHO05D005930 5.8e-27 125.2 211 35.1
Aa31LG8G6640 Aethionema arabicum HOM05D004911 ORTHO05D005930 7.5e-27 124.8 207 39.1
MSTRG.8077 Avicennia marina HOM05D004911 ORTHO05D005930 7.5e-27 124.8 211 37.4
Cc07_g19490 Coffea canephora HOM05D004911 ORTHO05D005930 9.8e-27 124.4 217 34.6
Sc06g0007820 Simmondsia chinensis HOM05D004911 ORTHO05D005930 9.8e-27 124.4 214 36.0
CsaV3_5G017560 Cucumis sativus L. HOM05D004911 ORTHO05D005930 1.3e-26 124.0 220 35.9
Os02g0829400 Oryza sativa ssp. japonica HOM05D004911 ORTHO05D005930 1.7e-26 123.6 209 35.4
Oeu056145.2 Olea europaea HOM05D004911 ORTHO05D005930 2.2e-26 123.2 213 36.6
unitig_22.g6363 Utricularia gibba HOM05D004911 ORTHO05D005930 2.2e-26 123.2 214 34.6
MELO3C005202.2 Cucumis melo HOM05D004911 ORTHO05D005930 6.4e-26 121.7 220 35.9
AUR62015197 Chenopodium quinoa HOM05D004911 ORTHO05D005930 1.1e-25 120.9 210 37.1
AUR62017660 Chenopodium quinoa HOM05D004911 ORTHO05D005930 1.4e-25 120.6 208 36.5
Zm00001eb259390 Zea mays HOM05D004911 ORTHO05D005930 7.0e-25 118.2 202 34.7
Hund08529 Selenicereus undatus HOM05D004911 ORTHO05D005930 1.3e-23 114.0 214 34.1
Ah.01g001680 Amaranthus hybridus HOM05D004911 ORTHO05D005930 1.1e-22 110.9 198 36.4
ATR0564G294 Amborella trichopoda HOM05D004911 ORTHO05D005930 2.1e-21 106.7 226 31.9
HPP92_012845 Vanilla planifolia HOM05D004911 ORTHO05D005930 4.7e-21 105.5 156 36.5
SHI47080 Sapria himalayana HOM05D004911 ORTHO05D005930 6.4e-18 95.1 77 63.6
HPP92_012853 Vanilla planifolia HOM05D004911 ORTHO05D005930 7.3e-14 81.6 84 44.0
Pp3c23_5970 Physcomitrium patens HOM05D004911 ORTHO05D005930 1.1e-12 77.8 244 27.5
SMO367G0101 Selaginella moellendorffii HOM05D004911 ORTHO05D005930 1.1e-12 77.8 206 30.1
Mapoly0023s0169 Marchantia polymorpha HOM05D004911 ORTHO05D005930 1.8e-12 77.0 242 28.1
TPR.G32325 Trifolium pratense HOM05D004911 ORTHO05D005930 2.9e-10 69.7 76 50.0
AagrBONN_evm.TU.Sc2ySwM_228.3554 Anthoceros agrestis HOM05D004911 ORTHO05D005930 3.8e-10 69.3 92 37.0


User provided reference genes

Program Settings