Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI50428 Sapria himalayana HOM05D005493 ORTHO05D007154 4.3e-99 364.8 197 100.0
Duzib192G0504 Durio zibethinus HOM05D005493 ORTHO05D007154 1.6e-29 133.7 118 62.7
TAR626G1878 Trochodendron aralioides HOM05D005493 ORTHO05D007154 2.7e-29 132.9 174 48.9
Nn1g07522 Nelumbo nucifera HOM05D005493 ORTHO05D007154 2.0e-27 126.7 123 58.5
TWI63G0139 Tripterygium wilfordii HOM05D005493 ORTHO05D007154 1.3e-26 124.0 118 60.2
Actinidia11906 Actinidia chinensis HOM05D005493 ORTHO05D007154 6.3e-26 121.7 160 49.4
CAN.G1156.21 Capsicum annuum HOM05D005493 ORTHO05D007154 6.3e-26 121.7 154 47.4
SalBow8G5358 Salvia bowleyana HOM05D005493 ORTHO05D007154 1.1e-25 120.9 118 55.9
CsaV3_1G015560 Cucumis sativus L. HOM05D005493 ORTHO05D007154 6.9e-25 118.2 120 57.5
DCAR_006316 Daucus carota HOM05D005493 ORTHO05D007154 2.6e-24 116.3 152 46.7
Thecc.06G236400 Theobroma cacao HOM05D005493 ORTHO05D007154 3.4e-24 115.9 160 46.2
VMungo0540G1721 Vigna mungo HOM05D005493 ORTHO05D007154 4.5e-24 115.5 125 52.8
Hma1.2p1_1175F.1_g264030 Hydrangea macrophylla HOM05D005493 ORTHO05D007154 5.9e-24 115.2 149 47.7
Manes.13G088900 Manihot esculenta HOM05D005493 ORTHO05D007154 1.3e-23 114.0 124 54.0
Duzib160G0837 Durio zibethinus HOM05D005493 ORTHO05D007154 1.7e-23 113.6 126 52.4
CiPaw.10G081900 Carya illinoinensis HOM05D005493 ORTHO05D007154 3.8e-23 112.5 171 45.6
ClCG01G010900 Citrullus lanatus HOM05D005493 ORTHO05D007154 5.0e-23 112.1 120 55.0
Sc17g0007990 Simmondsia chinensis HOM05D005493 ORTHO05D007154 5.0e-23 112.1 179 44.1
TWI38G1153 Tripterygium wilfordii HOM05D005493 ORTHO05D007154 8.5e-23 111.3 118 55.1
Actinidia39254 Actinidia chinensis HOM05D005493 ORTHO05D007154 3.2e-22 109.4 141 48.2
Sed0001140 Sechium edule HOM05D005493 ORTHO05D007154 3.2e-22 109.4 120 55.0
Cc09_g00320 Coffea canephora HOM05D005493 ORTHO05D007154 4.2e-22 109.0 153 45.8
Dinv15338 Davidia involucrata HOM05D005493 ORTHO05D007154 4.2e-22 109.0 166 45.2
SGA_v2.0_scaffold7G03695 Striga asiatica HOM05D005493 ORTHO05D007154 4.2e-22 109.0 129 48.1
Lsat_1_v5_gn_4_63901 Lactuca sativa HOM05D005493 ORTHO05D007154 5.5e-22 108.6 149 42.3
TPR.G17550 Trifolium pratense HOM05D005493 ORTHO05D007154 7.2e-22 108.2 168 42.3
MELO3C026067.2 Cucumis melo HOM05D005493 ORTHO05D007154 1.6e-21 107.1 120 51.7
Glyma.09G014500 Glycine max HOM05D005493 ORTHO05D007154 4.7e-21 105.5 145 45.5
Phvul.006G138500 Phaseolus vulgaris HOM05D005493 ORTHO05D007154 4.7e-21 105.5 125 48.0
PSO339G5884 Papaver somniferum HOM05D005493 ORTHO05D007154 6.1e-21 105.1 121 50.4
Gohir.A05G175500 Gossypium hirsutum HOM05D005493 ORTHO05D007154 7.9e-21 104.8 152 43.4
CDE05G0023 Ceratophyllum demersum HOM05D005493 ORTHO05D007154 1.0e-20 104.4 143 44.1
Dinv02850 Davidia involucrata HOM05D005493 ORTHO05D007154 1.8e-20 103.6 120 50.0
Gohir.D05G178600 Gossypium hirsutum HOM05D005493 ORTHO05D007154 2.3e-20 103.2 156 42.3
Gorai.009G184000 Gossypium raimondii HOM05D005493 ORTHO05D007154 2.3e-20 103.2 156 42.3
HanXRQChr16g0515751 Helianthus annuus HOM05D005493 ORTHO05D007154 2.3e-20 103.2 149 40.9
CSS0047473 Camellia sinensis var. sinensis HOM05D005493 ORTHO05D007154 6.7e-20 101.7 177 39.5
Atru.chr1.2258 Acer truncatum HOM05D005493 ORTHO05D007154 8.8e-20 101.3 118 50.0
Cpa.g.sc27.228 Carica papaya HOM05D005493 ORTHO05D007154 8.8e-20 101.3 118 50.0
AUR62033011 Chenopodium quinoa HOM05D005493 ORTHO05D007154 8.8e-20 101.3 138 46.4
EL10Ac8g19414 Beta vulgaris HOM05D005493 ORTHO05D007154 1.1e-19 100.9 134 48.5
Hund29945 Selenicereus undatus HOM05D005493 ORTHO05D007154 1.1e-19 100.9 150 43.3
Glyma.15G120100 Glycine max HOM05D005493 ORTHO05D007154 2.0e-19 100.1 145 43.4
MSTRG.16053 Avicennia marina HOM05D005493 ORTHO05D007154 4.4e-19 99.0 136 44.9
Medtr2g027010 Medicago truncatula HOM05D005493 ORTHO05D007154 9.7e-19 97.8 169 38.5
PGSC0003DMG400013365 Solanum tuberosum HOM05D005493 ORTHO05D007154 9.7e-19 97.8 154 39.6
Lj1A1246T23 Lonicera japonica HOM05D005493 ORTHO05D007154 1.7e-18 97.1 150 42.0
Ca_00763_v3 Cicer arietinum L. HOM05D005493 ORTHO05D007154 2.2e-18 96.7 152 39.5
PGR042G0366 Punica granatum HOM05D005493 ORTHO05D007154 2.2e-18 96.7 140 45.0
ECA232G3574 Erigeron canadensis HOM05D005493 ORTHO05D007154 3.7e-18 95.9 149 40.3
Ah.11g043160 Amaranthus hybridus HOM05D005493 ORTHO05D007154 6.3e-18 95.1 149 47.0
SGA_v2.0_scaffold186G40127 Striga asiatica HOM05D005493 ORTHO05D007154 8.2e-18 94.7 150 38.0
Potri.016G005500 Populus trichocarpa HOM05D005493 ORTHO05D007154 4.1e-17 92.4 135 45.9
THA.LOC104806738 Tarenaya hassleriana HOM05D005493 ORTHO05D007154 4.1e-17 92.4 127 41.7
Sabra16G0010400 Salix brachista HOM05D005493 ORTHO05D007154 1.5e-16 90.5 154 42.2
Rhsim13G0140700 Rhododendron simsii HOM05D005493 ORTHO05D007154 2.0e-16 90.1 142 38.0
Aa31sc219G70 Aethionema arabicum HOM05D005493 ORTHO05D007154 3.5e-16 89.4 153 37.3
Psat1g172480 Pisum sativum HOM05D005493 ORTHO05D007154 4.5e-16 89.0 163 36.2
Rhsim13G0140600 Rhododendron simsii HOM05D005493 ORTHO05D007154 2.9e-15 86.3 154 38.3
Lj6g0009296 Lotus japonicus HOM05D005493 ORTHO05D007154 1.5e-14 84.0 153 38.6
HPP92_027483 Vanilla planifolia HOM05D005493 ORTHO05D007154 1.9e-14 83.6 118 39.0
Eucgr.E03858 Eucalyptus grandis HOM05D005493 ORTHO05D007154 7.2e-14 81.6 119 42.9
vmacro03608 Vaccinium macrocarpon HOM05D005493 ORTHO05D007154 9.4e-14 81.3 117 44.4
Potri.006G004900 Populus trichocarpa HOM05D005493 ORTHO05D007154 1.2e-13 80.9 169 37.3
Lalb_Chr18g0057311 Lupinus albus HOM05D005493 ORTHO05D007154 2.1e-13 80.1 124 41.1
COL.COLO4_31918 Corchorus olitorius HOM05D005493 ORTHO05D007154 3.6e-13 79.3 117 41.9
Aqoxy1G04259 Aquilegia oxysepala HOM05D005493 ORTHO05D007154 1.8e-12 77.0 123 39.8
Nitab4.5_0001296g0130 Nicotiana tabacum HOM05D005493 ORTHO05D007154 3.9e-12 75.9 154 33.8
arahy.Tifrunner.gnm1.ann1.N8508C Arachis hypogaea HOM05D005493 ORTHO05D007154 5.2e-12 75.5 154 37.0
CANSAT56G4202 Cannabis sativa HOM05D005493 ORTHO05D007154 1.5e-11 73.9 161 36.0
SEGI_02626 Sequoiadendron giganteum HOM05D005493 ORTHO05D007154 1.5e-11 73.9 120 39.2
CDE05G0194 Ceratophyllum demersum HOM05D005493 ORTHO05D007154 3.3e-11 72.8 130 42.3
FAN28G0158 Fragaria x ananassa HOM05D005493 ORTHO05D007154 3.3e-11 72.8 119 39.5
Sopen11g007500 Solanum pennellii HOM05D005493 ORTHO05D007154 1.7e-10 70.5 98 38.8
AagrBONN_evm.TU.Sc2ySwM_362.2751 Anthoceros agrestis HOM05D005493 ORTHO05D007154 2.2e-10 70.1 130 40.8
BcaC06g34232 Brassica carinata HOM05D005493 ORTHO05D007154 2.8e-10 69.7 127 34.6
Peaxi162Scf00827g00517 Petunia axillaris HOM05D005493 ORTHO05D007154 2.8e-10 69.7 98 39.8
Zm00001eb253250 Zea mays HOM05D005493 ORTHO05D007154 6.3e-10 68.6 133 35.3
Sp2g12390 Schrenkiella parvula HOM05D005493 ORTHO05D007154 1.4e-09 67.4 127 34.6
Solyc11g012760.2 Solanum lycopersicum HOM05D005493 ORTHO05D007154 1.4e-09 67.4 98 37.8
arahy.Tifrunner.gnm1.ann1.2D6L40 Arachis hypogaea HOM05D005493 ORTHO05D007154 2.4e-09 66.6 154 35.1
unitig_37.g12178 Utricularia gibba HOM05D005493 ORTHO05D007154 7.0e-09 65.1 118 38.1
Ciclev10015889m.g Citrus clementina HOM05D005493 ORTHO05D007154 9.1e-09 64.7 163 31.9
CARHR173630 Cardamine hirsuta HOM05D005493 ORTHO05D007154 1.2e-08 64.3 127 35.4
QL05p067786 Quercus lobata HOM05D005493 ORTHO05D007154 2.0e-08 63.5 120 38.3
C07p31340 Brassica napus HOM05D005493 ORTHO05D007154 2.6e-08 63.2 127 33.1
Pp3c2_12110 Physcomitrium patens HOM05D005493 ORTHO05D007154 2.6e-08 63.2 152 32.9
ATR0751G138 Amborella trichopoda HOM05D005493 ORTHO05D007154 3.5e-08 62.8 165 31.5
Migut.M01444 Erythranthe guttata HOM05D005493 ORTHO05D007154 3.5e-08 62.8 51 58.8
MD10G1339200 Malus domestica HOM05D005493 ORTHO05D007154 3.5e-08 62.8 149 34.2
BcaB07g30764 Brassica carinata HOM05D005493 ORTHO05D007154 4.5e-08 62.4 126 34.1
Carub.0008s0010 Capsella rubella HOM05D005493 ORTHO05D007154 1.0e-07 61.2 121 34.7
Pp3c1_33120 Physcomitrium patens HOM05D005493 ORTHO05D007154 8.5e-07 58.2 138 31.9
A06p44860 Brassica napus HOM05D005493 ORTHO05D007154 1.5e-06 57.4 127 31.5
BraA06t27358Z Brassica rapa HOM05D005493 ORTHO05D007154 1.5e-06 57.4 127 31.5
Haze_07019 Corylus avellana HOM05D005493 ORTHO05D007154 1.9e-06 57.0 39 61.5
RcHm_v2.0_Chr2g0120371 Rosa chinensis HOM05D005493 ORTHO05D007154 1.9e-06 57.0 164 31.1
Cfa000035 Carpinus fangiana HOM05D005493 ORTHO05D007154 2.5e-06 56.6 39 61.5
MSTRG.7128 Avicennia marina HOM05D005493 ORTHO05D007154 4.2e-06 55.8 168 30.4
Prupe.4G003700 Prunus persica HOM05D005493 ORTHO05D007154 9.4e-06 54.7 149 32.9


User provided reference genes

Program Settings