Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI50190 Sapria himalayana HOM05D003993 ORTHO05D005336 2.6e-89 332.0 168 100.0
Sabra11G0119600 Salix brachista HOM05D003993 ORTHO05D005336 3.1e-42 175.6 132 70.5
Cpa.g.sc97.71 Carica papaya HOM05D003993 ORTHO05D005336 4.5e-41 171.8 132 68.2
Manes.15G076600 Manihot esculenta HOM05D003993 ORTHO05D005336 4.5e-41 171.8 132 68.2
TWI38G0109 Tripterygium wilfordii HOM05D003993 ORTHO05D005336 4.5e-41 171.8 132 68.9
Dinv22306 Davidia involucrata HOM05D003993 ORTHO05D005336 1.0e-40 170.6 132 67.4
Gohir.A01G074400 Gossypium hirsutum HOM05D003993 ORTHO05D005336 1.3e-40 170.2 132 69.7
Potri.011G132800 Populus trichocarpa HOM05D003993 ORTHO05D005336 1.3e-40 170.2 132 67.4
TWI39G1096 Tripterygium wilfordii HOM05D003993 ORTHO05D005336 1.3e-40 170.2 132 67.4
Duzib170G0292 Durio zibethinus HOM05D003993 ORTHO05D005336 8.5e-40 167.5 131 69.5
Gohir.D01G060900 Gossypium hirsutum HOM05D003993 ORTHO05D005336 8.5e-40 167.5 132 69.7
ECA236G0263 Erigeron canadensis HOM05D003993 ORTHO05D005336 4.2e-39 165.2 132 65.9
Gorai.002G082300 Gossypium raimondii HOM05D003993 ORTHO05D005336 4.2e-39 165.2 132 68.2
CSS0003157 Camellia sinensis var. sinensis HOM05D003993 ORTHO05D005336 5.5e-39 164.9 132 65.2
CSS0014856 Camellia sinensis var. sinensis HOM05D003993 ORTHO05D005336 5.5e-39 164.9 132 65.2
HanXRQChr11g0332991 Helianthus annuus HOM05D003993 ORTHO05D005336 5.5e-39 164.9 132 65.9
Lsat_1_v5_gn_7_108360 Lactuca sativa HOM05D003993 ORTHO05D005336 7.2e-39 164.5 132 65.2
Potri.001G417200 Populus trichocarpa HOM05D003993 ORTHO05D005336 1.2e-38 163.7 132 67.4
SGA_v2.0_scaffold320G48573 Striga asiatica HOM05D003993 ORTHO05D005336 1.6e-38 163.3 131 67.9
THA.LOC104817894 Tarenaya hassleriana HOM05D003993 ORTHO05D005336 2.1e-38 162.9 132 65.9
vmacro11768 Vaccinium macrocarpon HOM05D003993 ORTHO05D005336 2.1e-38 162.9 132 66.7
Ciclev10007272m.g Citrus clementina HOM05D003993 ORTHO05D005336 3.6e-38 162.2 132 65.9
MD11G1227200 Malus domestica HOM05D003993 ORTHO05D005336 3.6e-38 162.2 132 68.2
AT3G20720 Arabidopsis thaliana HOM05D003993 ORTHO05D005336 4.7e-38 161.8 132 64.4
A01p34110 Brassica napus HOM05D003993 ORTHO05D005336 6.1e-38 161.4 132 64.4
Eucgr.F03424 Eucalyptus grandis HOM05D003993 ORTHO05D005336 6.1e-38 161.4 132 65.9
BcaC09g49013 Brassica carinata HOM05D003993 ORTHO05D005336 8.0e-38 161.0 132 64.4
C01p43520 Brassica napus HOM05D003993 ORTHO05D005336 8.0e-38 161.0 132 64.4
BolC1t04312H Brassica oleracea HOM05D003993 ORTHO05D005336 8.0e-38 161.0 132 64.4
BraA01t03515Z Brassica rapa HOM05D003993 ORTHO05D005336 8.0e-38 161.0 132 64.4
CANSAT11G1844 Cannabis sativa HOM05D003993 ORTHO05D005336 8.0e-38 161.0 132 62.1
Atru.chr2.3206 Acer truncatum HOM05D003993 ORTHO05D005336 1.0e-37 160.6 135 64.4
Carub.0003s2068 Capsella rubella HOM05D003993 ORTHO05D005336 1.0e-37 160.6 132 63.6
CsaV3_3G005470 Cucumis sativus L. HOM05D003993 ORTHO05D005336 1.0e-37 160.6 132 63.6
MD03G1211800 Malus domestica HOM05D003993 ORTHO05D005336 1.0e-37 160.6 132 68.2
ClCG10G005790 Citrullus lanatus HOM05D003993 ORTHO05D005336 1.4e-37 160.2 132 63.6
Sp3g18740 Schrenkiella parvula HOM05D003993 ORTHO05D005336 1.4e-37 160.2 132 62.9
BcaB04g20636 Brassica carinata HOM05D003993 ORTHO05D005336 1.8e-37 159.8 132 63.6
Cfa020417 Carpinus fangiana HOM05D003993 ORTHO05D005336 2.3e-37 159.5 132 65.2
Gohir.D05G365000 Gossypium hirsutum HOM05D003993 ORTHO05D005336 2.3e-37 159.5 132 66.7
CARHR096540 Cardamine hirsuta HOM05D003993 ORTHO05D005336 3.0e-37 159.1 132 62.9
MELO3C025431.2 Cucumis melo HOM05D003993 ORTHO05D005336 3.0e-37 159.1 132 62.9
Solyc07g064080.4 Solanum lycopersicum HOM05D003993 ORTHO05D005336 3.0e-37 159.1 132 67.4
Gorai.009G427300 Gossypium raimondii HOM05D003993 ORTHO05D005336 4.0e-37 158.7 132 66.7
Haze_09608 Corylus avellana HOM05D003993 ORTHO05D005336 6.7e-37 157.9 132 64.4
Prupe.4G202100 Prunus persica HOM05D003993 ORTHO05D005336 1.1e-36 157.1 132 66.7
Sed0012816 Sechium edule HOM05D003993 ORTHO05D005336 1.5e-36 156.8 133 62.4
Actinidia09963 Actinidia chinensis HOM05D003993 ORTHO05D005336 2.0e-36 156.4 133 63.2
Cc05_g13220 Coffea canephora HOM05D003993 ORTHO05D005336 2.0e-36 156.4 132 64.4
VMungo1080G1710 Vigna mungo HOM05D003993 ORTHO05D005336 2.0e-36 156.4 132 63.6
AL3G34640 Arabidopsis lyrata HOM05D003993 ORTHO05D005336 3.3e-36 155.6 132 62.9
Sopen07g032220 Solanum pennellii HOM05D003993 ORTHO05D005336 3.3e-36 155.6 132 65.9
HanXRQChr08g0234101 Helianthus annuus HOM05D003993 ORTHO05D005336 5.7e-36 154.8 132 62.1
arahy.Tifrunner.gnm1.ann1.C7DQ5B Arachis hypogaea HOM05D003993 ORTHO05D005336 7.5e-36 154.5 133 61.7
arahy.Tifrunner.gnm1.ann1.YETR49 Arachis hypogaea HOM05D003993 ORTHO05D005336 7.5e-36 154.5 133 61.7
Ca_01754_v3 Cicer arietinum L. HOM05D003993 ORTHO05D005336 7.5e-36 154.5 135 63.7
Lalb_Chr14g0366101 Lupinus albus HOM05D003993 ORTHO05D005336 7.5e-36 154.5 133 64.7
arahy.Tifrunner.gnm1.ann1.M0TH05 Arachis hypogaea HOM05D003993 ORTHO05D005336 9.7e-36 154.1 133 64.7
Phvul.005G091400 Phaseolus vulgaris HOM05D003993 ORTHO05D005336 9.7e-36 154.1 132 62.9
Glyma.12G214500 Glycine max HOM05D003993 ORTHO05D005336 1.3e-35 153.7 132 62.9
TAR624G0674 Trochodendron aralioides HOM05D003993 ORTHO05D005336 1.3e-35 153.7 132 65.2
GSVIVG01014604001 Vitis vinifera HOM05D003993 ORTHO05D005336 1.3e-35 153.7 132 62.1
Duzib213G0987 Durio zibethinus HOM05D003993 ORTHO05D005336 2.8e-35 152.5 132 64.4
Lalb_Chr19g0134741 Lupinus albus HOM05D003993 ORTHO05D005336 6.3e-35 151.4 132 62.1
Psat7g122440 Pisum sativum HOM05D003993 ORTHO05D005336 6.3e-35 151.4 135 61.5
SEGI_25073 Sequoiadendron giganteum HOM05D003993 ORTHO05D005336 6.3e-35 151.4 132 62.9
unitig_26.g9969 Utricularia gibba HOM05D003993 ORTHO05D005336 6.3e-35 151.4 132 62.1
COL.COLO4_09564 Corchorus olitorius HOM05D003993 ORTHO05D005336 8.2e-35 151.0 132 63.6
Nitab4.5_0000397g0110 Nicotiana tabacum HOM05D003993 ORTHO05D005336 8.2e-35 151.0 132 64.4
Nitab4.5_0009192g0040 Nicotiana tabacum HOM05D003993 ORTHO05D005336 8.2e-35 151.0 132 64.4
Glyma.13G287100 Glycine max HOM05D003993 ORTHO05D005336 1.1e-34 150.6 132 62.1
QL08p013350 Quercus lobata HOM05D003993 ORTHO05D005336 1.4e-34 150.2 132 62.1
ATR0073G006 Amborella trichopoda HOM05D003993 ORTHO05D005336 2.4e-34 149.4 132 62.1
Migut.H01858 Erythranthe guttata HOM05D003993 ORTHO05D005336 5.3e-34 148.3 132 61.4
Lj3g0021702 Lotus japonicus HOM05D003993 ORTHO05D005336 7.0e-34 147.9 132 61.4
TPR.G36724 Trifolium pratense HOM05D003993 ORTHO05D005336 1.6e-33 146.7 132 59.8
Aqoxy4G02086 Aquilegia oxysepala HOM05D003993 ORTHO05D005336 2.7e-33 146.0 132 60.6
Glyma.12G135700 Glycine max HOM05D003993 ORTHO05D005336 4.5e-33 145.2 132 59.1
CDE05G2526 Ceratophyllum demersum HOM05D003993 ORTHO05D005336 7.7e-33 144.4 108 71.3
PSO541G2178 Papaver somniferum HOM05D003993 ORTHO05D005336 7.7e-33 144.4 133 62.4
PSO675G0751 Papaver somniferum HOM05D003993 ORTHO05D005336 7.7e-33 144.4 133 62.4
Nn1g03663 Nelumbo nucifera HOM05D003993 ORTHO05D005336 1.0e-32 144.1 132 62.1
Thecc.07G054200 Theobroma cacao HOM05D003993 ORTHO05D005336 1.0e-32 144.1 132 60.6
HPP92_011131 Vanilla planifolia HOM05D003993 ORTHO05D005336 1.0e-32 144.1 132 62.1
EL10Ac4g07982 Beta vulgaris HOM05D003993 ORTHO05D005336 2.9e-32 142.5 132 57.6
TAR626G1606 Trochodendron aralioides HOM05D003993 ORTHO05D005336 2.9e-32 142.5 132 61.4
Aa31LG8G7470 Aethionema arabicum HOM05D003993 ORTHO05D005336 1.1e-31 140.6 102 71.6
Nn1g06997 Nelumbo nucifera HOM05D003993 ORTHO05D005336 1.5e-31 140.2 132 59.8
Os04g0628600 Oryza sativa ssp. japonica HOM05D003993 ORTHO05D005336 1.5e-31 140.2 132 59.8
SalBow7G3755 Salvia bowleyana HOM05D003993 ORTHO05D005336 1.9e-31 139.8 104 71.2
Lj8C165T11 Lonicera japonica HOM05D003993 ORTHO05D005336 4.2e-31 138.7 150 53.3
Lj3g0011163 Lotus japonicus HOM05D003993 ORTHO05D005336 9.4e-31 137.5 133 57.9
CiPaw.11G183500 Carya illinoinensis HOM05D003993 ORTHO05D005336 2.7e-30 136.0 132 57.6
arahy.Tifrunner.gnm1.ann1.9VYU83 Arachis hypogaea HOM05D003993 ORTHO05D005336 4.7e-30 135.2 146 57.5
PGR031G1242 Punica granatum HOM05D003993 ORTHO05D005336 4.7e-30 135.2 132 56.8
Oeu032440.1 Olea europaea HOM05D003993 ORTHO05D005336 6.1e-30 134.8 132 56.8
DCAR_010016 Daucus carota HOM05D003993 ORTHO05D005336 1.0e-29 134.0 132 56.8
FvH4_3g21780 Fragaria vesca HOM05D003993 ORTHO05D005336 1.0e-29 134.0 132 56.8
FAN11G2565 Fragaria x ananassa HOM05D003993 ORTHO05D005336 1.0e-29 134.0 132 56.8
FAN16G1112 Fragaria x ananassa HOM05D003993 ORTHO05D005336 1.0e-29 134.0 132 56.8
SMO143G0035 Selaginella moellendorffii HOM05D003993 ORTHO05D005336 1.0e-29 134.0 132 52.3
AUR62015640 Chenopodium quinoa HOM05D003993 ORTHO05D005336 1.4e-29 133.7 132 55.3
HanXRQChr17g0562031 Helianthus annuus HOM05D003993 ORTHO05D005336 1.4e-29 133.7 132 56.1
Medtr2g082910 Medicago truncatula HOM05D003993 ORTHO05D005336 1.8e-29 133.3 104 67.3
FAN25G1663 Fragaria x ananassa HOM05D003993 ORTHO05D005336 3.0e-29 132.5 132 56.1
Peaxi162Scf01086g00149 Petunia axillaris HOM05D003993 ORTHO05D005336 3.0e-29 132.5 98 71.4
PGSC0003DMG401019261 Solanum tuberosum HOM05D003993 ORTHO05D005336 3.0e-29 132.5 132 57.6
FAN21G3569 Fragaria x ananassa HOM05D003993 ORTHO05D005336 6.8e-29 131.3 132 56.1
Psat5g251760 Pisum sativum HOM05D003993 ORTHO05D005336 3.4e-28 129.0 132 54.5
RcHm_v2.0_Chr5g0037331 Rosa chinensis HOM05D003993 ORTHO05D005336 2.2e-27 126.3 132 53.8
Pp3c10_1850 Physcomitrium patens HOM05D003993 ORTHO05D005336 4.5e-25 118.6 132 50.0
Mapoly0007s0002 Marchantia polymorpha HOM05D003993 ORTHO05D005336 1.3e-24 117.1 135 48.1
CBR_g39891 Chara braunii HOM05D003993 ORTHO05D005336 5.0e-24 115.2 135 51.9
MBI18_g40553_MAGBIO Magnolia biondii HOM05D003993 ORTHO05D005336 6.1e-22 108.2 70 75.7
Pp3c15_5100 Physcomitrium patens HOM05D003993 ORTHO05D005336 4.4e-20 102.1 132 43.9
Ah.06g183050 Amaranthus hybridus HOM05D003993 ORTHO05D005336 2.2e-19 99.8 67 70.1
VMungo1127G0084 Vigna mungo HOM05D003993 ORTHO05D005336 6.3e-19 98.2 68 67.6
CAN.G337.149 Capsicum annuum HOM05D003993 ORTHO05D005336 3.1e-18 95.9 95 57.9
ECA246G2094 Erigeron canadensis HOM05D003993 ORTHO05D005336 1.2e-17 94.0 100 53.0
Thhalv10019934m.g Eutrema salsugineum HOM05D003993 ORTHO05D005336 7.3e-15 84.7 85 52.9
AagrBONN_evm.TU.Sc2ySwM_344.1679 Anthoceros agrestis HOM05D003993 ORTHO05D005336 4.0e-13 79.0 110 43.6
Gohir.A04G022400 Gossypium hirsutum HOM05D003993 ORTHO05D005336 1.6e-09 67.0 56 60.7
BolC5t33074H Brassica oleracea HOM05D003993 ORTHO05D005336 1.3e-08 63.9 56 57.1
BcaC05g28293 Brassica carinata HOM05D003993 ORTHO05D005336 3.9e-08 62.4 56 55.4
arahy.Tifrunner.gnm1.ann1.R5QT9H Arachis hypogaea HOM05D003993 ORTHO05D005336 3.6e-06 55.8 57 59.6
C05p43510 Brassica napus HOM05D003993 ORTHO05D005336 4.7e-06 55.5 53 52.8


User provided reference genes

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