Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI49945 Sapria himalayana HOM05D014022 ORTHO05D001573 3.5e-86 321.6 166 100.0
SHI47448 Sapria himalayana HOM05D004990 ORTHO05D000022 7.6e-41 171.0 144 74.3
SHI16093 Sapria himalayana HOM05D001595 ORTHO05D001573 5.3e-18 95.1 59 83.1
SHI12979 Sapria himalayana HOM05D014022 ORTHO05D369591 6.5e-16 88.2 80 66.2
SHI37668 Sapria himalayana HOM05D002876 ORTHO05D000106 1.1e-15 87.4 83 59.0
SHI28975 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-14 83.2 54 75.9
SHI33335 Sapria himalayana HOM05D001595 ORTHO05D001573 7.9e-14 81.3 61 70.5
SHI26717 Sapria himalayana HOM05D014022 ORTHO05D364071 1.0e-13 80.9 76 64.5
SHI11133 Sapria himalayana HOM05D014022 ORTHO05D365404 2.3e-13 79.7 57 68.4
SHI42205 Sapria himalayana HOM05D000035 ORTHO05D000009 3.0e-13 79.3 68 61.8
SHI27587 Sapria himalayana HOM05D003883 ORTHO05D004605 5.1e-13 78.6 70 55.7
SHI41177 Sapria himalayana HOM05D000854 ORTHO05D000778 5.1e-13 78.6 91 53.8
SHI29699 Sapria himalayana HOM05D014022 ORTHO05D002419 1.3e-11 73.9 58 65.5
SHI29494 Sapria himalayana HOM05D014022 ORTHO05D369467 4.8e-11 72.0 54 70.4
SHI40747 Sapria himalayana HOM05D000002 ORTHO05D000001 8.2e-11 71.2 59 61.0
SHI26862 Sapria himalayana HOM05D014022 ORTHO05D370340 1.1e-10 70.9 55 67.3
SHI37471 Sapria himalayana HOM05D014022 ORTHO05D367284 1.1e-10 70.9 68 55.9
SHI33577 Sapria himalayana HOM05D001595 ORTHO05D001573 4.1e-10 68.9 39 79.5
SHI50171 Sapria himalayana HOM05D000049 ORTHO05D000027 1.5e-09 67.0 58 62.1
SHI37543 Sapria himalayana HOM05D000616 ORTHO05D000233 2.0e-09 66.6 54 64.8
SHI33007 Sapria himalayana HOM05D001595 ORTHO05D365904 2.6e-09 66.2 44 79.5
SHI44063 Sapria himalayana HOM05D000049 ORTHO05D000027 2.6e-09 66.2 54 64.8
SHI44404 Sapria himalayana HOM05D000043 ORTHO05D002577 4.5e-09 65.5 51 70.6
Aqoxy2G02018 Aquilegia oxysepala HOM05D001595 ORTHO05D001573 7.7e-09 64.7 57 49.1
Nn3g16635 Nelumbo nucifera HOM05D001595 ORTHO05D001573 2.2e-08 63.2 37 70.3
SHI02936 Sapria himalayana HOM05D001595 ORTHO05D001573 2.9e-08 62.8 59 55.9
SHI05426 Sapria himalayana HOM05D004755 ORTHO05D006137 2.9e-08 62.8 59 59.3
DCAR_027561 Daucus carota HOM05D000076 ORTHO05D001377 5.0e-08 62.0 45 57.8
PSO478G4628 Papaver somniferum HOM05D001595 ORTHO05D001573 5.0e-08 62.0 59 50.8
Potri.001G306700 Populus trichocarpa HOM05D001595 ORTHO05D001573 6.5e-08 61.6 45 62.2
SHI31625 Sapria himalayana HOM05D001595 ORTHO05D370575 6.5e-08 61.6 41 80.5
Aqoxy5G02057 Aquilegia oxysepala HOM05D001595 ORTHO05D001573 8.5e-08 61.2 45 60.0
TAR628G0448 Trochodendron aralioides HOM05D001595 ORTHO05D001573 8.5e-08 61.2 39 64.1
SHI35490 Sapria himalayana HOM05D000854 ORTHO05D000778 1.1e-07 60.8 54 61.1
TAR381G0522 Trochodendron aralioides HOM05D001595 ORTHO05D001573 1.1e-07 60.8 36 72.2
TAR381G1172 Trochodendron aralioides HOM05D001595 ORTHO05D001573 1.1e-07 60.8 36 72.2
Nn1g06066 Nelumbo nucifera HOM05D001595 ORTHO05D001573 1.4e-07 60.5 39 64.1
Solyc11g005500.1 Solanum lycopersicum HOM05D001595 ORTHO05D001573 1.4e-07 60.5 38 65.8
Cfa002804 Carpinus fangiana HOM05D001595 ORTHO05D001573 1.9e-07 60.1 40 62.5
CiPaw.04G087400 Carya illinoinensis HOM05D001595 ORTHO05D001573 1.9e-07 60.1 39 59.0
PSO170G4482 Papaver somniferum HOM05D001595 ORTHO05D001573 1.9e-07 60.1 37 64.9
AUR62019334 Chenopodium quinoa HOM05D001595 ORTHO05D001573 2.5e-07 59.7 38 63.2
Nn5g28770 Nelumbo nucifera HOM05D001595 ORTHO05D001573 2.5e-07 59.7 43 60.5
SHI22463 Sapria himalayana HOM05D009967 ORTHO05D001573 2.5e-07 59.7 54 61.1
Aqoxy2G00733 Aquilegia oxysepala HOM05D001595 ORTHO05D001573 3.2e-07 59.3 40 62.5
PSO478G1785 Papaver somniferum HOM05D001595 ORTHO05D001573 3.2e-07 59.3 38 60.5
PSO675G8159 Papaver somniferum HOM05D001595 ORTHO05D001573 3.2e-07 59.3 59 47.5
PSO782G3363 Papaver somniferum HOM05D001595 ORTHO05D001573 3.2e-07 59.3 38 60.5
EL10Ac3g05349 Beta vulgaris HOM05D001595 ORTHO05D001573 4.2e-07 58.9 40 60.0
PSO170G3144 Papaver somniferum HOM05D001595 ORTHO05D001573 4.2e-07 58.9 37 62.2
PSO210G6253 Papaver somniferum HOM05D001595 ORTHO05D001573 4.2e-07 58.9 37 62.2
Sabra16G0192900 Salix brachista HOM05D001595 ORTHO05D001573 4.2e-07 58.9 44 61.4
SHI22028 Sapria himalayana HOM05D014022 ORTHO05D364972 4.2e-07 58.9 53 60.4
SHI54543 Sapria himalayana HOM05D001595 ORTHO05D001573 4.2e-07 58.9 26 92.3
PSO801G0676 Papaver somniferum HOM05D001595 ORTHO05D001573 5.5e-07 58.5 37 62.2
TAR381G0734 Trochodendron aralioides HOM05D001595 ORTHO05D001573 5.5e-07 58.5 40 57.5
TAR381G0944 Trochodendron aralioides HOM05D001595 ORTHO05D001573 5.5e-07 58.5 40 57.5
Cc07_g16880 Coffea canephora HOM05D001595 ORTHO05D001573 7.2e-07 58.2 40 57.5
Manes.17G065250 Manihot esculenta HOM05D001595 ORTHO05D001573 7.2e-07 58.2 38 63.2
PSO478G4572 Papaver somniferum HOM05D001595 ORTHO05D001573 7.2e-07 58.2 38 60.5
Rhsim08G0004100 Rhododendron simsii HOM05D001595 ORTHO05D001573 7.2e-07 58.2 40 57.5
SHI20919 Sapria himalayana HOM05D001595 ORTHO05D364012 7.2e-07 58.2 42 73.8
Ciclev10003810m.g Citrus clementina HOM05D001595 ORTHO05D001573 9.4e-07 57.8 35 68.6
DCAR_001403 Daucus carota HOM05D001595 ORTHO05D001573 9.4e-07 57.8 42 57.1
THA.LOC104812034 Tarenaya hassleriana HOM05D001595 ORTHO05D001573 9.4e-07 57.8 40 57.5
AUR62006156 Chenopodium quinoa HOM05D001595 ORTHO05D001573 1.2e-06 57.4 40 57.5
Hma1.2p1_0038F.1_g024240 Hydrangea macrophylla HOM05D001595 ORTHO05D001573 1.2e-06 57.4 40 55.0
MBI17_g24511_MAGBIO Magnolia biondii HOM05D001595 ORTHO05D001573 1.2e-06 57.4 39 53.8
MBI17_g24664_MAGBIO Magnolia biondii HOM05D001595 ORTHO05D001573 1.2e-06 57.4 39 53.8
MBI18_g10388_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 1.2e-06 57.4 37 64.9
TAR374G1635 Trochodendron aralioides HOM05D001595 ORTHO05D001573 1.2e-06 57.4 39 61.5
TAR628G1528 Trochodendron aralioides HOM05D001595 ORTHO05D001573 1.2e-06 57.4 39 61.5
Dinv02717 Davidia involucrata HOM05D001595 ORTHO05D001573 1.6e-06 57.0 38 57.9
PSO675G1185 Papaver somniferum HOM05D001595 ORTHO05D001573 1.6e-06 57.0 41 56.1
QL10p018379 Quercus lobata HOM05D001595 ORTHO05D001573 1.6e-06 57.0 38 60.5
QL10p018395 Quercus lobata HOM05D001595 ORTHO05D001573 1.6e-06 57.0 38 60.5
Atru.chr13.2075 Acer truncatum HOM05D001595 ORTHO05D001573 2.1e-06 56.6 59 47.5
Aqoxy4G02324 Aquilegia oxysepala HOM05D001595 ORTHO05D001573 2.1e-06 56.6 40 60.0
DCAR_001408 Daucus carota HOM05D001595 ORTHO05D001573 2.1e-06 56.6 42 54.8
Duzib187G0218 Durio zibethinus HOM05D001595 ORTHO05D001573 2.1e-06 56.6 39 56.4
Glyma.20G168300 Glycine max HOM05D001595 ORTHO05D001573 2.1e-06 56.6 45 55.6
Nn1g00645 Nelumbo nucifera HOM05D001595 ORTHO05D001573 2.1e-06 56.6 36 63.9
Nitab4.5_0002138g0050 Nicotiana tabacum HOM05D001595 ORTHO05D001573 2.1e-06 56.6 40 55.0
Potri.001G306600 Populus trichocarpa HOM05D001595 ORTHO05D001573 2.1e-06 56.6 52 51.9
TWI79G1743 Tripterygium wilfordii HOM05D001595 ORTHO05D001573 2.1e-06 56.6 39 53.8
Atru.chr4.618 Acer truncatum HOM05D001595 ORTHO05D001573 2.7e-06 56.2 45 51.1
ATR0584G162 Amborella trichopoda HOM05D001595 ORTHO05D001573 2.7e-06 56.2 38 55.3
AL2G36900 Arabidopsis lyrata HOM05D001595 ORTHO05D001573 2.7e-06 56.2 52 50.0
AT1G76750 Arabidopsis thaliana HOM05D001595 ORTHO05D001573 2.7e-06 56.2 52 50.0
Migut.C00167 Erythranthe guttata HOM05D001595 ORTHO05D001573 2.7e-06 56.2 40 57.5
Migut.C00168 Erythranthe guttata HOM05D001595 ORTHO05D001573 2.7e-06 56.2 40 57.5
Manes.12G150100 Manihot esculenta HOM05D001595 ORTHO05D001573 2.7e-06 56.2 44 54.5
PGSC0003DMG400003995 Solanum tuberosum HOM05D001595 ORTHO05D001573 2.7e-06 56.2 38 60.5
Thecc.01G118600 Theobroma cacao HOM05D001595 ORTHO05D001573 2.7e-06 56.2 39 53.8
CARHR070290 Cardamine hirsuta HOM05D001595 ORTHO05D001573 3.6e-06 55.8 40 60.0
Lsat_1_v5_gn_1_6241 Lactuca sativa HOM05D001595 ORTHO05D001573 3.6e-06 55.8 40 57.5
Lj3g0006531 Lotus japonicus HOM05D001595 ORTHO05D001573 3.6e-06 55.8 40 52.5
MBI16_g15525_MAGBIO Magnolia biondii HOM05D001595 ORTHO05D001573 3.6e-06 55.8 36 58.3
QL10p018398 Quercus lobata HOM05D001595 ORTHO05D001573 3.6e-06 55.8 38 57.9
SHI42293 Sapria himalayana HOM05D001595 ORTHO05D001573 3.6e-06 55.8 26 88.5
SHI55235 Sapria himalayana HOM05D001595 ORTHO05D001573 3.6e-06 55.8 26 88.5
Aa31LG4G6820 Aethionema arabicum HOM05D001595 ORTHO05D001573 4.7e-06 55.5 40 60.0
Lj5g0011167 Lotus japonicus HOM05D001595 ORTHO05D001573 4.7e-06 55.5 40 52.5
unitig_7.g29872 Utricularia gibba HOM05D001595 ORTHO05D001573 4.7e-06 55.5 39 53.8
unitig_748.g8664 Utricularia gibba HOM05D001595 ORTHO05D001573 4.7e-06 55.5 39 53.8
CiPaw.04G087500 Carya illinoinensis HOM05D001595 ORTHO05D001573 6.1e-06 55.1 38 55.3
CiPaw.04G087600 Carya illinoinensis HOM05D001595 ORTHO05D001573 6.1e-06 55.1 38 55.3
CiPaw.16G010800 Carya illinoinensis HOM05D001595 ORTHO05D001573 6.1e-06 55.1 45 51.1
Migut.L00051 Erythranthe guttata HOM05D001595 ORTHO05D001573 6.1e-06 55.1 38 55.3
FvH4_4g25660 Fragaria vesca HOM05D001595 ORTHO05D001573 6.1e-06 55.1 38 55.3
Manes.12G150000 Manihot esculenta HOM05D001595 ORTHO05D001573 6.1e-06 55.1 38 52.6
Oeu012712.1 Olea europaea HOM05D001595 ORTHO05D001573 6.1e-06 55.1 45 55.6
Sabra16G0192800 Salix brachista HOM05D001595 ORTHO05D001573 6.1e-06 55.1 44 52.3
SHI33440 Sapria himalayana HOM05D000049 ORTHO05D365529 6.1e-06 55.1 35 74.3
Sp5g31900 Schrenkiella parvula HOM05D001595 ORTHO05D001573 6.1e-06 55.1 40 57.5
Sc09g0009460 Simmondsia chinensis HOM05D001595 ORTHO05D001573 6.1e-06 55.1 39 53.8
TWI60G0213 Tripterygium wilfordii HOM05D001595 ORTHO05D001573 6.1e-06 55.1 56 46.4
TWI79G1366 Tripterygium wilfordii HOM05D001595 ORTHO05D001573 6.1e-06 55.1 38 60.5
Atru.chr8.1692 Acer truncatum HOM05D001595 ORTHO05D001573 7.9e-06 54.7 45 55.6
Thhalv10019517m.g Eutrema salsugineum HOM05D001595 ORTHO05D001573 7.9e-06 54.7 40 57.5
Nitab4.5_0001582g0120 Nicotiana tabacum HOM05D001595 ORTHO05D001573 7.9e-06 54.7 40 52.5
PSO782G4789 Papaver somniferum HOM05D001595 ORTHO05D001573 7.9e-06 54.7 37 59.5
Potri.001G353600 Populus trichocarpa HOM05D001595 ORTHO05D001573 7.9e-06 54.7 35 62.9
QL11p027894 Quercus lobata HOM05D001595 ORTHO05D001573 7.9e-06 54.7 38 55.3
RcHm_v2.0_Chr2g0119721 Rosa chinensis HOM05D001595 ORTHO05D001573 7.9e-06 54.7 38 55.3
SalBow5G5004 Salvia bowleyana HOM05D001595 ORTHO05D001573 7.9e-06 54.7 39 56.4
TWI75G1603 Tripterygium wilfordii HOM05D001595 ORTHO05D001573 7.9e-06 54.7 42 50.0


User provided reference genes

Program Settings