Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI49839 Sapria himalayana HOM05D010923 ORTHO05D003989 2.6e-55 218.4 102 100.0
SHI36351 Sapria himalayana HOM05D010923 ORTHO05D003989 8.6e-27 123.6 92 69.6
SHI42924 Sapria himalayana HOM05D010923 ORTHO05D003989 2.3e-24 115.5 92 65.2
SHI36761 Sapria himalayana HOM05D010923 ORTHO05D003989 1.4e-21 106.3 81 71.6
SHI50902 Sapria himalayana HOM05D010923 ORTHO05D003989 5.4e-21 104.4 81 69.1
SHI40238 Sapria himalayana HOM05D010923 ORTHO05D003989 1.6e-17 92.8 96 58.3
SHI35822 Sapria himalayana HOM05D010923 ORTHO05D003989 2.1e-17 92.4 86 59.3
SHI53541 Sapria himalayana HOM05D000849 ORTHO05D003989 2.8e-17 92.0 68 69.1
SHI53653 Sapria himalayana HOM05D000849 ORTHO05D003989 2.8e-17 92.0 68 69.1
SHI35683 Sapria himalayana HOM05D000558 ORTHO05D001857 4.9e-14 81.3 50 74.0
SHI42703 Sapria himalayana HOM05D000849 ORTHO05D003989 6.4e-14 80.9 75 62.7
SHI23604 Sapria himalayana HOM05D000849 ORTHO05D003989 2.4e-13 79.0 44 77.3
SHI53930 Sapria himalayana HOM05D010923 ORTHO05D368975 2.4e-13 79.0 50 84.0
SHI52555 Sapria himalayana HOM05D000849 ORTHO05D003989 1.2e-12 76.6 51 68.6
SHI52725 Sapria himalayana HOM05D000849 ORTHO05D003989 1.2e-12 76.6 52 69.2
SHI53623 Sapria himalayana HOM05D000849 ORTHO05D003989 1.2e-12 76.6 51 68.6
SHI35267 Sapria himalayana HOM05D000849 ORTHO05D001857 1.6e-12 76.3 35 91.4
SHI51537 Sapria himalayana HOM05D000849 ORTHO05D003989 1.6e-12 76.3 54 68.5
SHI51484 Sapria himalayana HOM05D000849 ORTHO05D003989 2.0e-12 75.9 69 62.3
SHI33029 Sapria himalayana HOM05D000849 ORTHO05D003989 8.6e-11 70.5 47 70.2
SHI46441 Sapria himalayana HOM05D010923 ORTHO05D003989 5.6e-10 67.8 92 47.8
BcaB03g16769 Brassica carinata HOM05D000849 ORTHO05D003989 2.1e-09 65.9 113 38.1
BcaC06g36622 Brassica carinata HOM05D000849 ORTHO05D003989 2.1e-09 65.9 113 38.1
A07p00920 Brassica napus HOM05D000849 ORTHO05D003989 2.1e-09 65.9 113 38.1
C07p02080 Brassica napus HOM05D000849 ORTHO05D003989 2.1e-09 65.9 113 38.1
BraA07t27892Z Brassica rapa HOM05D000849 ORTHO05D003989 2.1e-09 65.9 113 38.1
SHI01895 Sapria himalayana HOM05D000849 ORTHO05D003989 2.1e-09 65.9 38 71.1
Duzib187G0631 Durio zibethinus HOM05D000849 ORTHO05D003989 2.8e-09 65.5 113 37.2
Gohir.A05G027200 Gossypium hirsutum HOM05D000849 ORTHO05D003989 2.8e-09 65.5 113 37.2
Gohir.A13G194600 Gossypium hirsutum HOM05D000849 ORTHO05D003989 2.8e-09 65.5 113 37.2
Gohir.D05G029100 Gossypium hirsutum HOM05D000849 ORTHO05D003989 2.8e-09 65.5 113 37.2
Gohir.D13G200300 Gossypium hirsutum HOM05D000849 ORTHO05D003989 2.8e-09 65.5 113 37.2
Gorai.013G229100 Gossypium raimondii HOM05D000849 ORTHO05D003989 2.8e-09 65.5 113 37.2
Manes.03G029400 Manihot esculenta HOM05D000849 ORTHO05D003989 2.8e-09 65.5 113 38.1
TWI63G0367 Tripterygium wilfordii HOM05D000849 ORTHO05D003989 2.8e-09 65.5 113 37.2
Manes.16G106500 Manihot esculenta HOM05D000849 ORTHO05D003989 3.6e-09 65.1 113 38.9
Sabra06G0117900 Salix brachista HOM05D000849 ORTHO05D003989 3.6e-09 65.1 113 38.9
Potri.006G149100 Populus trichocarpa HOM05D000849 ORTHO05D003989 4.7e-09 64.7 113 38.1
Atru.chr7.1508 Acer truncatum HOM05D000849 ORTHO05D003989 6.2e-09 64.3 113 38.1
Cpa.g.sc78.44 Carica papaya HOM05D000849 ORTHO05D003989 6.2e-09 64.3 113 38.1
Ciclev10009831m.g Citrus clementina HOM05D000849 ORTHO05D003989 6.2e-09 64.3 113 38.1
Duzib150G0327 Durio zibethinus HOM05D000849 ORTHO05D003989 6.2e-09 64.3 113 38.1
SHI47843 Sapria himalayana HOM05D000849 ORTHO05D003989 6.2e-09 64.3 29 93.1
Thecc.09G096900 Theobroma cacao HOM05D000849 ORTHO05D003989 6.2e-09 64.3 113 38.1
SHI38667 Sapria himalayana HOM05D000849 ORTHO05D003989 8.0e-09 63.9 29 96.6
SHI50198 Sapria himalayana HOM05D000849 ORTHO05D003989 8.0e-09 63.9 31 90.3
AL3G48440 Arabidopsis lyrata HOM05D000849 ORTHO05D003989 1.1e-08 63.5 113 38.1
AT2G19790 Arabidopsis thaliana HOM05D000849 ORTHO05D003989 1.1e-08 63.5 113 38.1
BolC7t40613H Brassica oleracea HOM05D000849 ORTHO05D003989 1.1e-08 63.5 113 38.1
Carub.0003s3407 Capsella rubella HOM05D000849 ORTHO05D003989 1.1e-08 63.5 113 38.1
CARHR110250 Cardamine hirsuta HOM05D000849 ORTHO05D003989 1.1e-08 63.5 113 38.1
SHI35365 Sapria himalayana HOM05D000849 ORTHO05D003989 1.1e-08 63.5 39 69.2
SHI54080 Sapria himalayana HOM05D000849 ORTHO05D003989 1.1e-08 63.5 39 74.4
Sp3g33140 Schrenkiella parvula HOM05D000849 ORTHO05D003989 1.1e-08 63.5 113 38.1
FAN28G0398 Fragaria x ananassa HOM05D000849 ORTHO05D003989 1.4e-08 63.2 113 36.3
Gorai.009G029200 Gossypium raimondii HOM05D000849 ORTHO05D003989 1.4e-08 63.2 113 36.3
MD02G1069000 Malus domestica HOM05D000849 ORTHO05D003989 1.4e-08 63.2 113 36.3
RcHm_v2.0_Chr2g0092321 Rosa chinensis HOM05D000849 ORTHO05D003989 1.4e-08 63.2 113 36.3
SHI27184 Sapria himalayana HOM05D000849 ORTHO05D003989 1.4e-08 63.2 40 70.0
Dinv42272 Davidia involucrata HOM05D000849 ORTHO05D003989 1.8e-08 62.8 113 37.2
FvH4_1g06580 Fragaria vesca HOM05D000849 ORTHO05D003989 1.8e-08 62.8 113 35.4
FAN19G1758 Fragaria x ananassa HOM05D000849 ORTHO05D003989 1.8e-08 62.8 113 35.4
FAN26G0314 Fragaria x ananassa HOM05D000849 ORTHO05D003989 1.8e-08 62.8 113 35.4
FAN26G0318 Fragaria x ananassa HOM05D000849 ORTHO05D003989 1.8e-08 62.8 113 35.4
Peaxi162Scf00298g00114 Petunia axillaris HOM05D000849 ORTHO05D003989 1.8e-08 62.8 113 37.2
SHI37256 Sapria himalayana HOM05D010923 ORTHO05D001219 1.8e-08 62.8 106 42.5
HPP92_024117 Vanilla planifolia HOM05D000849 ORTHO05D003989 1.8e-08 62.8 113 38.1
BcaC04g22820 Brassica carinata HOM05D000849 ORTHO05D003989 2.3e-08 62.4 113 37.2
A09p12580 Brassica napus HOM05D000849 ORTHO05D003989 2.3e-08 62.4 113 37.2
C09p14940 Brassica napus HOM05D000849 ORTHO05D003989 2.3e-08 62.4 113 37.2
BolC9t54396H Brassica oleracea HOM05D000849 ORTHO05D003989 2.3e-08 62.4 113 37.2
BraA09t36905Z Brassica rapa HOM05D000849 ORTHO05D003989 2.3e-08 62.4 113 37.2
Lalb_Chr14g0375221 Lupinus albus HOM05D000849 ORTHO05D003989 2.3e-08 62.4 113 36.3
Aa31LG8G16770 Aethionema arabicum HOM05D000849 ORTHO05D003989 3.1e-08 62.0 113 37.2
CAN.G1058.10 Capsicum annuum HOM05D000849 ORTHO05D003989 3.1e-08 62.0 113 36.3
CiPaw.04G154300 Carya illinoinensis HOM05D000849 ORTHO05D003989 3.1e-08 62.0 113 36.3
Prupe.7G216600 Prunus persica HOM05D000849 ORTHO05D003989 3.1e-08 62.0 113 37.2
QL02p086970 Quercus lobata HOM05D000849 ORTHO05D003989 3.1e-08 62.0 113 36.3
Ah.09g230330 Amaranthus hybridus HOM05D000849 ORTHO05D003989 4.0e-08 61.6 113 36.3
Aqoxy7G01359 Aquilegia oxysepala HOM05D000849 ORTHO05D003989 4.0e-08 61.6 113 36.3
EL10Ac8g18347 Beta vulgaris HOM05D000849 ORTHO05D003989 4.0e-08 61.6 113 36.3
Haze_25852 Corylus avellana HOM05D000849 ORTHO05D003989 4.0e-08 61.6 113 38.1
Sed0020746 Sechium edule HOM05D000849 ORTHO05D003989 4.0e-08 61.6 113 38.1
THA.LOC104814582 Tarenaya hassleriana HOM05D000849 ORTHO05D003989 4.0e-08 61.6 113 34.5
THA.LOC104820037 Tarenaya hassleriana HOM05D000849 ORTHO05D003989 4.0e-08 61.6 113 37.2
MD15G1200600 Malus domestica HOM05D000849 ORTHO05D003989 5.2e-08 61.2 113 37.2
Phvul.002G306700 Phaseolus vulgaris HOM05D000849 ORTHO05D003989 5.2e-08 61.2 113 37.2
VMungo0251G1053 Vigna mungo HOM05D000849 ORTHO05D003989 5.2e-08 61.2 113 37.2
CiPaw.03G221100 Carya illinoinensis HOM05D000849 ORTHO05D003989 6.8e-08 60.8 113 37.2
Eucgr.C00951 Eucalyptus grandis HOM05D000849 ORTHO05D003989 6.8e-08 60.8 113 37.2
Mapoly0016s0005 Marchantia polymorpha HOM05D000849 ORTHO05D003989 6.8e-08 60.8 113 37.2
PGR142G0605 Punica granatum HOM05D000849 ORTHO05D003989 6.8e-08 60.8 113 37.2
SHI52623 Sapria himalayana HOM05D000849 ORTHO05D003989 6.8e-08 60.8 42 69.0
Sc08g0008140 Simmondsia chinensis HOM05D000849 ORTHO05D003989 6.8e-08 60.8 113 35.4
HPP92_009846 Vanilla planifolia HOM05D000849 ORTHO05D003989 6.8e-08 60.8 113 37.2
arahy.Tifrunner.gnm1.ann1.URAI8Z Arachis hypogaea HOM05D000849 ORTHO05D003989 8.9e-08 60.5 113 35.4
arahy.Tifrunner.gnm1.ann1.XR2T8G Arachis hypogaea HOM05D000849 ORTHO05D003989 8.9e-08 60.5 113 35.4
MSTRG.19541 Avicennia marina HOM05D000849 ORTHO05D003989 8.9e-08 60.5 113 36.3
ECA236G3815 Erigeron canadensis HOM05D000849 ORTHO05D003989 8.9e-08 60.5 113 35.4
Lsat_1_v5_gn_8_88280 Lactuca sativa HOM05D000849 ORTHO05D003989 8.9e-08 60.5 113 35.4
Nitab4.5_0004180g0010 Nicotiana tabacum HOM05D000849 ORTHO05D003989 8.9e-08 60.5 113 35.4
Os08g0395300 Oryza sativa ssp. japonica HOM05D000849 ORTHO05D003989 8.9e-08 60.5 113 37.2
vmacro06264 Vaccinium macrocarpon HOM05D000849 ORTHO05D003989 8.9e-08 60.5 113 35.4
Aqoxy7G03958 Aquilegia oxysepala HOM05D000849 ORTHO05D003989 1.2e-07 60.1 113 33.6
AUR62033272 Chenopodium quinoa HOM05D000849 ORTHO05D003989 1.2e-07 60.1 113 37.2
Cc06_g10770 Coffea canephora HOM05D000849 ORTHO05D003989 1.2e-07 60.1 113 37.2
Glyma.01G005300 Glycine max HOM05D000849 ORTHO05D003989 1.2e-07 60.1 113 35.4
Glyma.07G126300 Glycine max HOM05D000849 ORTHO05D003989 1.2e-07 60.1 113 35.4
Lj4g0006741 Lotus japonicus HOM05D000849 ORTHO05D003989 1.2e-07 60.1 113 36.3
Phvul.004G173800 Phaseolus vulgaris HOM05D000849 ORTHO05D003989 1.2e-07 60.1 113 35.4
Pp3c14_14670 Physcomitrium patens HOM05D000849 ORTHO05D003989 1.2e-07 60.1 113 34.5
SEGI_24636 Sequoiadendron giganteum HOM05D000849 ORTHO05D003989 1.2e-07 60.1 113 33.6
CDE05G3423 Ceratophyllum demersum HOM05D000849 ORTHO05D003989 1.5e-07 59.7 113 37.2
ClCG03G015970 Citrullus lanatus HOM05D000849 ORTHO05D003989 1.5e-07 59.7 113 36.3
MELO3C015429.2 Cucumis melo HOM05D000849 ORTHO05D003989 1.5e-07 59.7 113 36.3
CsaV3_1G039990 Cucumis sativus L. HOM05D000849 ORTHO05D003989 1.5e-07 59.7 113 36.3
Migut.K00562 Erythranthe guttata HOM05D000849 ORTHO05D003989 1.5e-07 59.7 114 36.0
Os10g0368400 Oryza sativa ssp. japonica HOM05D000849 ORTHO05D003989 1.5e-07 59.7 113 36.3
PSO210G0713 Papaver somniferum HOM05D000849 ORTHO05D003989 1.5e-07 59.7 113 35.4
PSO210G7720 Papaver somniferum HOM05D000849 ORTHO05D003989 1.5e-07 59.7 113 35.4
Hund26299 Selenicereus undatus HOM05D000849 ORTHO05D003989 1.5e-07 59.7 113 36.3
CDE05G2264 Ceratophyllum demersum HOM05D000849 ORTHO05D003989 2.0e-07 59.3 113 36.3
Lj2g0010400 Lotus japonicus HOM05D000849 ORTHO05D003989 2.0e-07 59.3 113 34.5
MBI04_g06989_MAGBIO Magnolia biondii HOM05D000849 ORTHO05D003989 2.0e-07 59.3 113 35.4
Nn8g39010 Nelumbo nucifera HOM05D000849 ORTHO05D003989 2.0e-07 59.3 113 35.4
SHI34965 Sapria himalayana HOM05D000849 ORTHO05D003989 2.0e-07 59.3 26 96.2
unitig_26.g9704 Utricularia gibba HOM05D000849 ORTHO05D003989 2.0e-07 59.3 113 34.5
CSS0012070 Camellia sinensis var. sinensis HOM05D000849 ORTHO05D003989 2.6e-07 58.9 113 36.3
FAN08G2450 Fragaria x ananassa HOM05D000849 ORTHO05D003989 2.6e-07 58.9 113 35.4
FAN18G0868 Fragaria x ananassa HOM05D000849 ORTHO05D003989 2.6e-07 58.9 113 35.4
Medtr7g100010 Medicago truncatula HOM05D000849 ORTHO05D003989 2.6e-07 58.9 113 34.5
Medtr8g102180 Medicago truncatula HOM05D000849 ORTHO05D003989 2.6e-07 58.9 113 34.5
Oeu036246.1 Olea europaea HOM05D000849 ORTHO05D003989 2.6e-07 58.9 113 35.4
SGA_v2.0_scaffold279G46782 Striga asiatica HOM05D000849 ORTHO05D003989 2.6e-07 58.9 113 33.6
SGA_v2.0_scaffold302G47808 Striga asiatica HOM05D000849 ORTHO05D003989 2.6e-07 58.9 113 33.6
TAR636G1139 Trochodendron aralioides HOM05D000849 ORTHO05D003989 2.6e-07 58.9 113 35.4
VMungo0464G2126 Vigna mungo HOM05D000849 ORTHO05D003989 2.6e-07 58.9 113 36.3
Actinidia29881 Actinidia chinensis HOM05D000849 ORTHO05D003989 3.4e-07 58.5 85 42.4
FvH4_5g22770 Fragaria vesca HOM05D000849 ORTHO05D003989 3.4e-07 58.5 113 35.4
SHI46084 Sapria himalayana HOM05D000849 ORTHO05D003989 3.4e-07 58.5 29 89.7
ATR0705G079 Amborella trichopoda HOM05D000849 ORTHO05D003989 4.4e-07 58.2 113 35.4
Solyc05g026130.3 Solanum lycopersicum HOM05D000849 ORTHO05D003989 4.4e-07 58.2 113 34.5
Sopen05g022340 Solanum pennellii HOM05D000849 ORTHO05D003989 4.4e-07 58.2 113 34.5
PGSC0003DMG400028942 Solanum tuberosum HOM05D000849 ORTHO05D003989 4.4e-07 58.2 113 34.5
Actinidia17501 Actinidia chinensis HOM05D000849 ORTHO05D003989 5.8e-07 57.8 113 35.4
Zm00001eb178620 Zea mays HOM05D000849 ORTHO05D003989 5.8e-07 57.8 113 35.4
Ca_17379_v3 Cicer arietinum L. HOM05D000849 ORTHO05D003989 9.8e-07 57.0 113 33.6
Psat7g018560 Pisum sativum HOM05D000849 ORTHO05D003989 9.8e-07 57.0 113 33.6
SalBow6G5864 Salvia bowleyana HOM05D000849 ORTHO05D003989 9.8e-07 57.0 84 41.7
TPR.G34776 Trifolium pratense HOM05D000849 ORTHO05D003989 9.8e-07 57.0 113 33.6
HanXRQChr09g0238561 Helianthus annuus HOM05D000849 ORTHO05D003989 1.3e-06 56.6 113 33.6
SMO196G0114 Selaginella moellendorffii HOM05D000849 ORTHO05D003989 1.3e-06 56.6 113 32.7
GSVIVG01015270001 Vitis vinifera HOM05D000849 ORTHO05D003989 1.3e-06 56.6 113 34.5
CBR_g2797 Chara braunii HOM05D000849 ORTHO05D003989 2.9e-06 55.5 113 34.5
SHI43902 Sapria himalayana HOM05D010923 ORTHO05D003989 2.9e-06 55.5 27 96.3
SHI44502 Sapria himalayana HOM05D010923 ORTHO05D003989 2.9e-06 55.5 27 96.3
SHI47575 Sapria himalayana HOM05D010923 ORTHO05D003989 2.9e-06 55.5 27 96.3
SHI48148 Sapria himalayana HOM05D010923 ORTHO05D003989 2.9e-06 55.5 27 96.3
SHI49175 Sapria himalayana HOM05D000849 ORTHO05D003989 2.9e-06 55.5 40 65.0
PSO832G0835 Papaver somniferum HOM05D000849 ORTHO05D003989 3.7e-06 55.1 113 32.7
MSTRG.6030 Avicennia marina HOM05D000849 ORTHO05D003989 6.4e-06 54.3 113 32.7
Hma1.2p1_0663F.1_g198540 Hydrangea macrophylla HOM05D000849 ORTHO05D003989 6.4e-06 54.3 125 32.0
DCAR_028635 Daucus carota HOM05D000849 ORTHO05D003989 8.3e-06 53.9 63 46.0
Rhsim03G0235600 Rhododendron simsii HOM05D000849 ORTHO05D003989 8.3e-06 53.9 63 46.0


User provided reference genes

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