Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI49537 Sapria himalayana HOM05D014257 ORTHO05D006170 2.0e-86 322.4 166 100.0
SHI29976 Sapria himalayana HOM05D014257 ORTHO05D006170 2.8e-35 152.5 106 77.4
SHI51656 Sapria himalayana HOM05D014257 ORTHO05D006170 2.2e-32 142.9 79 89.9
SHI30011 Sapria himalayana HOM05D014257 ORTHO05D006170 6.5e-32 141.4 79 89.9
SHI36151 Sapria himalayana HOM05D014257 ORTHO05D006170 1.2e-22 110.5 91 69.2
SHI36458 Sapria himalayana HOM05D014257 ORTHO05D365477 1.5e-20 103.6 53 92.5
SHI50515 Sapria himalayana HOM05D000219 ORTHO05D010276 6.5e-16 88.2 43 93.0
SHI39611 Sapria himalayana HOM05D014257 ORTHO05D010276 5.5e-15 85.1 43 90.7
SHI51936 Sapria himalayana HOM05D014257 ORTHO05D367911 3.3e-12 75.9 41 85.4
SHI36796 Sapria himalayana HOM05D000219 ORTHO05D010276 6.3e-11 71.6 48 75.0
SHI50826 Sapria himalayana HOM05D000219 ORTHO05D010276 8.2e-11 71.2 48 72.9
Sabra04G0044900 Salix brachista HOM05D000219 ORTHO05D000226 1.1e-10 70.9 44 70.5
SHI50538 Sapria himalayana HOM05D000219 ORTHO05D010276 1.1e-10 70.9 48 72.9
SHI39844 Sapria himalayana HOM05D000219 ORTHO05D010276 1.4e-10 70.5 47 74.5
SHI53731 Sapria himalayana HOM05D000219 ORTHO05D010276 1.4e-10 70.5 47 68.1
Potri.004G067000 Populus trichocarpa HOM05D000219 ORTHO05D000226 2.4e-10 69.7 44 68.2
SHI49809 Sapria himalayana HOM05D000219 ORTHO05D010276 2.4e-10 69.7 47 74.5
SHI50011 Sapria himalayana HOM05D000219 ORTHO05D010276 2.4e-10 69.7 47 74.5
SHI50254 Sapria himalayana HOM05D000219 ORTHO05D010276 2.4e-10 69.7 47 74.5
SHI50990 Sapria himalayana HOM05D000219 ORTHO05D010276 2.4e-10 69.7 47 74.5
SHI52092 Sapria himalayana HOM05D000219 ORTHO05D010276 2.4e-10 69.7 41 78.0
SHI48256 Sapria himalayana HOM05D000219 ORTHO05D010276 3.1e-10 69.3 43 76.7
Lsat_1_v5_gn_5_65400 Lactuca sativa HOM05D000219 ORTHO05D000226 4.1e-10 68.9 44 65.9
SHI47776 Sapria himalayana HOM05D000219 ORTHO05D010276 4.1e-10 68.9 41 78.0
SHI50092 Sapria himalayana HOM05D000219 ORTHO05D010276 4.1e-10 68.9 41 75.6
SHI46048 Sapria himalayana HOM05D000219 ORTHO05D010276 5.3e-10 68.6 41 78.0
SHI46806 Sapria himalayana HOM05D000219 ORTHO05D010276 5.3e-10 68.6 41 78.0
Actinidia25675 Actinidia chinensis HOM05D000219 ORTHO05D010276 6.9e-10 68.2 44 70.5
HanXRQChr12g0381231 Helianthus annuus HOM05D000219 ORTHO05D000226 6.9e-10 68.2 44 65.9
MBI03_g13437_MAGBIO Magnolia biondii HOM05D000219 ORTHO05D000226 9.1e-10 67.8 44 63.6
MBI03_g44526_MAGBIO Magnolia biondii HOM05D000219 ORTHO05D000226 9.1e-10 67.8 44 63.6
SHI39058 Sapria himalayana HOM05D014257 ORTHO05D369945 9.1e-10 67.8 52 63.5
SHI52107 Sapria himalayana HOM05D000219 ORTHO05D010276 9.1e-10 67.8 47 70.2
SHI38623 Sapria himalayana HOM05D010085 ORTHO05D011712 1.2e-09 67.4 39 87.2
SHI50751 Sapria himalayana HOM05D000219 ORTHO05D010276 1.2e-09 67.4 41 78.0
TPR.G26646 Trifolium pratense HOM05D000219 ORTHO05D000226 1.2e-09 67.4 47 61.7
AL6G36350 Arabidopsis lyrata HOM05D000219 ORTHO05D000226 1.5e-09 67.0 44 63.6
CiPaw.15G107700 Carya illinoinensis HOM05D000219 ORTHO05D000226 1.5e-09 67.0 44 68.2
Nitab4.5_0000477g0170 Nicotiana tabacum HOM05D000219 ORTHO05D000226 1.5e-09 67.0 44 65.9
Nitab4.5_0010398g0010 Nicotiana tabacum HOM05D000219 ORTHO05D000226 1.5e-09 67.0 44 65.9
SHI51293 Sapria himalayana HOM05D000219 ORTHO05D010276 1.5e-09 67.0 47 72.3
SHI44937 Sapria himalayana HOM05D000219 ORTHO05D010276 2.0e-09 66.6 47 68.1
SHI50787 Sapria himalayana HOM05D000219 ORTHO05D010276 2.0e-09 66.6 48 70.8
SHI51776 Sapria himalayana HOM05D000219 ORTHO05D010276 2.0e-09 66.6 48 70.8
TAR636G0341 Trochodendron aralioides HOM05D000219 ORTHO05D000226 2.0e-09 66.6 44 68.2
SHI50432 Sapria himalayana HOM05D000219 ORTHO05D010276 2.6e-09 66.2 47 72.3
SHI50752 Sapria himalayana HOM05D000219 ORTHO05D010276 2.6e-09 66.2 48 72.9
AT5G24760 Arabidopsis thaliana HOM05D000219 ORTHO05D000226 3.4e-09 65.9 41 68.3
CSS0027431 Camellia sinensis var. sinensis HOM05D000219 ORTHO05D000226 3.4e-09 65.9 44 68.2
DCAR_023241 Daucus carota HOM05D000219 ORTHO05D000226 3.4e-09 65.9 44 59.1
Peaxi162Scf00643g00536 Petunia axillaris HOM05D000219 ORTHO05D000226 3.4e-09 65.9 44 63.6
Nn3g18548 Nelumbo nucifera HOM05D000219 ORTHO05D000226 4.5e-09 65.5 41 70.7
Phvul.004G136700 Phaseolus vulgaris HOM05D000219 ORTHO05D000226 4.5e-09 65.5 41 68.3
SHI48912 Sapria himalayana HOM05D000219 ORTHO05D010276 4.5e-09 65.5 41 75.6
SHI49309 Sapria himalayana HOM05D000219 ORTHO05D010276 4.5e-09 65.5 41 75.6
TPR.G26649 Trifolium pratense HOM05D000219 ORTHO05D010276 4.5e-09 65.5 47 57.4
VMungo0464G1361 Vigna mungo HOM05D000219 ORTHO05D000226 4.5e-09 65.5 41 68.3
Zm00001eb185610 Zea mays HOM05D000219 ORTHO05D000226 4.5e-09 65.5 44 63.6
Aqoxy1G01067 Aquilegia oxysepala HOM05D000219 ORTHO05D000226 5.9e-09 65.1 41 68.3
Hma1.2p1_0816F.1_g223010 Hydrangea macrophylla HOM05D000219 ORTHO05D000226 5.9e-09 65.1 44 63.6
Hma1.2p1_0816F.1_g223020 Hydrangea macrophylla HOM05D000219 ORTHO05D000226 5.9e-09 65.1 44 63.6
Rhsim12G0137400 Rhododendron simsii HOM05D000219 ORTHO05D000226 7.7e-09 64.7 47 59.6
Cpa.g.sc168.2 Carica papaya HOM05D000219 ORTHO05D000226 1.0e-08 64.3 41 68.3
Dinv03509 Davidia involucrata HOM05D000219 ORTHO05D000226 1.0e-08 64.3 41 68.3
Lj5A168T98 Lonicera japonica HOM05D000219 ORTHO05D000226 1.0e-08 64.3 44 63.6
Lj2g0026377 Lotus japonicus HOM05D000219 ORTHO05D000226 1.0e-08 64.3 41 68.3
Prupe.6G022900 Prunus persica HOM05D000219 ORTHO05D000226 1.0e-08 64.3 51 58.8
SHI01038 Sapria himalayana HOM05D000105 ORTHO05D000023 1.0e-08 64.3 49 71.4
SHI51978 Sapria himalayana HOM05D000219 ORTHO05D010276 1.0e-08 64.3 41 75.6
SHI54810 Sapria himalayana HOM05D000219 ORTHO05D010276 1.0e-08 64.3 41 73.2
Solyc06g072160.3 Solanum lycopersicum HOM05D000219 ORTHO05D000226 1.0e-08 64.3 44 63.6
Sopen06g028460 Solanum pennellii HOM05D000219 ORTHO05D000226 1.0e-08 64.3 44 63.6
Thecc.05G196900 Theobroma cacao HOM05D000219 ORTHO05D000226 1.0e-08 64.3 41 65.9
Carub.0006s2261 Capsella rubella HOM05D000219 ORTHO05D000226 1.3e-08 63.9 44 56.8
PGR044G1542 Punica granatum HOM05D000219 ORTHO05D000226 1.3e-08 63.9 41 65.9
SHI46224 Sapria himalayana HOM05D000219 ORTHO05D370485 1.3e-08 63.9 41 70.7
TWI36G1688 Tripterygium wilfordii HOM05D000219 ORTHO05D000226 1.3e-08 63.9 41 65.9
CAN.G65.64 Capsicum annuum HOM05D000219 ORTHO05D000226 1.7e-08 63.5 44 61.4
Glyma.09G161600 Glycine max HOM05D000219 ORTHO05D000226 1.7e-08 63.5 41 68.3
Gohir.D08G245900 Gossypium hirsutum HOM05D000219 ORTHO05D000226 1.7e-08 63.5 41 65.9
Gorai.004G262400 Gossypium raimondii HOM05D000219 ORTHO05D000226 1.7e-08 63.5 41 65.9
Oeu062062.1 Olea europaea HOM05D000219 ORTHO05D000226 1.7e-08 63.5 44 63.6
Prupe.5G200700 Prunus persica HOM05D000219 ORTHO05D010276 1.7e-08 63.5 41 65.9
SHI47031 Sapria himalayana HOM05D000219 ORTHO05D010276 1.7e-08 63.5 37 78.4
arahy.Tifrunner.gnm1.ann1.B2MH1M Arachis hypogaea HOM05D000219 ORTHO05D000226 2.2e-08 63.2 44 61.4
arahy.Tifrunner.gnm1.ann1.P0W1U8 Arachis hypogaea HOM05D000219 ORTHO05D000226 2.2e-08 63.2 44 61.4
CARHR188730 Cardamine hirsuta HOM05D000219 ORTHO05D000226 2.2e-08 63.2 44 56.8
Sp2g22670 Schrenkiella parvula HOM05D000219 ORTHO05D000226 2.2e-08 63.2 44 56.8
GSVIVG01024246001 Vitis vinifera HOM05D000219 ORTHO05D000226 2.2e-08 63.2 44 61.4
Thhalv10004400m.g Eutrema salsugineum HOM05D000219 ORTHO05D000226 2.9e-08 62.8 41 61.0
BcaC03g17949 Brassica carinata HOM05D000219 ORTHO05D009306 3.8e-08 62.4 44 56.8
BolC2t12063H Brassica oleracea HOM05D000219 ORTHO05D000226 3.8e-08 62.4 44 56.8
ECA233G3819 Erigeron canadensis HOM05D000219 ORTHO05D000226 3.8e-08 62.4 40 65.0
FvH4_5g18580 Fragaria vesca HOM05D000219 ORTHO05D000226 3.8e-08 62.4 44 63.6
FAN08G0809 Fragaria x ananassa HOM05D000219 ORTHO05D000226 3.8e-08 62.4 44 63.6
FAN18G2659 Fragaria x ananassa HOM05D000219 ORTHO05D000226 3.8e-08 62.4 44 63.6
Medtr6g068930 Medicago truncatula HOM05D000219 ORTHO05D000226 3.8e-08 62.4 41 65.9
Atru.chr9.15 Acer truncatum HOM05D000219 ORTHO05D000226 5.0e-08 62.0 44 63.6
MD06G1241000 Malus domestica HOM05D000219 ORTHO05D000226 5.0e-08 62.0 41 63.4
Lalb_Chr22g0354051 Lupinus albus HOM05D000219 ORTHO05D000226 6.5e-08 61.6 41 65.9
SalBow5G1826 Salvia bowleyana HOM05D000219 ORTHO05D000226 6.5e-08 61.6 44 61.4
vmacro16403 Vaccinium macrocarpon HOM05D000219 ORTHO05D000226 6.5e-08 61.6 44 61.4
arahy.Tifrunner.gnm1.ann1.HKZ3DM Arachis hypogaea HOM05D000219 ORTHO05D010276 8.5e-08 61.2 46 56.5
BcaB07g29920 Brassica carinata HOM05D000219 ORTHO05D000226 8.5e-08 61.2 44 54.5
A02p40120 Brassica napus HOM05D000219 ORTHO05D009306 8.5e-08 61.2 44 54.5
BraA02t08978Z Brassica rapa HOM05D000219 ORTHO05D000226 8.5e-08 61.2 44 54.5
COL.COLO4_05180 Corchorus olitorius HOM05D000219 ORTHO05D000226 8.5e-08 61.2 40 62.5
Manes.02G226001 Manihot esculenta HOM05D000219 ORTHO05D000226 8.5e-08 61.2 40 65.0
RcHm_v2.0_Chr7g0176931 Rosa chinensis HOM05D000219 ORTHO05D000226 8.5e-08 61.2 44 61.4
SHI53988 Sapria himalayana HOM05D000219 ORTHO05D365004 8.5e-08 61.2 37 75.7
TPR.G31358 Trifolium pratense HOM05D000219 ORTHO05D000226 8.5e-08 61.2 41 63.4
arahy.Tifrunner.gnm1.ann1.J4R23C Arachis hypogaea HOM05D000219 ORTHO05D010276 1.1e-07 60.8 44 59.1
C02p60090 Brassica napus HOM05D000219 ORTHO05D009306 1.1e-07 60.8 44 54.5
CsaV3_1G007740 Cucumis sativus L. HOM05D000219 ORTHO05D000226 1.1e-07 60.8 51 58.8
Duzib128G1276 Durio zibethinus HOM05D000219 ORTHO05D000226 1.1e-07 60.8 41 63.4
Eucgr.K02331 Eucalyptus grandis HOM05D000219 ORTHO05D000226 1.1e-07 60.8 44 54.5
Prupe.5G245200 Prunus persica HOM05D000219 ORTHO05D000226 1.1e-07 60.8 41 63.4
SHI51431 Sapria himalayana HOM05D000219 ORTHO05D010276 1.1e-07 60.8 41 68.3
Migut.O00280 Erythranthe guttata HOM05D000219 ORTHO05D000226 1.4e-07 60.5 44 61.4
Sc10g0006240 Simmondsia chinensis HOM05D000219 ORTHO05D000226 1.4e-07 60.5 48 60.4
arahy.Tifrunner.gnm1.ann1.9I3Q6X Arachis hypogaea HOM05D000219 ORTHO05D010276 1.9e-07 60.1 45 57.8
MD14G1246800 Malus domestica HOM05D000219 ORTHO05D000226 1.9e-07 60.1 41 58.5
QL08p055124 Quercus lobata HOM05D000219 ORTHO05D000226 1.9e-07 60.1 40 62.5
SHI53277 Sapria himalayana HOM05D000219 ORTHO05D010276 1.9e-07 60.1 46 65.2
ClCG01G014590 Citrullus lanatus HOM05D000219 ORTHO05D000226 2.5e-07 59.7 41 63.4
PSO063G5970 Papaver somniferum HOM05D000219 ORTHO05D000226 2.5e-07 59.7 44 56.8
Os02g0637700 Oryza sativa ssp. japonica HOM05D000219 ORTHO05D000226 3.2e-07 59.3 44 59.1
Sed0015203 Sechium edule HOM05D000219 ORTHO05D000226 3.2e-07 59.3 51 56.9
Aa31LG11G3990 Aethionema arabicum HOM05D000219 ORTHO05D000226 4.2e-07 58.9 44 54.5
AL1G35960 Arabidopsis lyrata HOM05D000219 ORTHO05D000226 4.2e-07 58.9 51 56.9
SHI10704 Sapria himalayana HOM05D007985 ORTHO05D012379 4.2e-07 58.9 49 67.3
SHI50564 Sapria himalayana HOM05D000219 ORTHO05D010276 4.2e-07 58.9 39 76.9
CANSAT35G1028 Cannabis sativa HOM05D000219 ORTHO05D000226 5.5e-07 58.5 44 56.8
MELO3C002189.2 Cucumis melo HOM05D000219 ORTHO05D000226 5.5e-07 58.5 71 42.3
arahy.Tifrunner.gnm1.ann1.W4Q01Q Arachis hypogaea HOM05D000219 ORTHO05D010276 7.2e-07 58.2 44 54.5
SHI26284 Sapria himalayana HOM05D000002 ORTHO05D000001 7.2e-07 58.2 50 66.0
ATR0124G003 Amborella trichopoda HOM05D000219 ORTHO05D000226 9.4e-07 57.8 44 56.8
arahy.Tifrunner.gnm1.ann1.DB7K0S Arachis hypogaea HOM05D000219 ORTHO05D010276 9.4e-07 57.8 44 56.8
Eucgr.K02333 Eucalyptus grandis HOM05D000219 ORTHO05D000226 9.4e-07 57.8 54 48.1
PSO782G1609 Papaver somniferum HOM05D000219 ORTHO05D000226 9.4e-07 57.8 44 54.5
SHI10800 Sapria himalayana HOM05D024631 ORTHO05D006170 9.4e-07 57.8 37 75.7
Sp1g19915 Schrenkiella parvula HOM05D000219 ORTHO05D000226 1.2e-06 57.4 51 54.9
SEGI_17296 Sequoiadendron giganteum HOM05D000219 ORTHO05D000226 1.2e-06 57.4 46 52.2
arahy.Tifrunner.gnm1.ann1.JNE1E7 Arachis hypogaea HOM05D000219 ORTHO05D010276 1.6e-06 57.0 43 55.8
A07p14440 Brassica napus HOM05D000219 ORTHO05D000226 1.6e-06 57.0 51 54.9
C07p21250 Brassica napus HOM05D000219 ORTHO05D000226 1.6e-06 57.0 51 54.9
BolC7t42654H Brassica oleracea HOM05D000219 ORTHO05D000226 1.6e-06 57.0 51 54.9
BraA07t29195Z Brassica rapa HOM05D000219 ORTHO05D000226 1.6e-06 57.0 51 54.9
THA.LOC104798999 Tarenaya hassleriana HOM05D000219 ORTHO05D000226 1.6e-06 57.0 40 60.0
MELO3C011043.2 Cucumis melo HOM05D000219 ORTHO05D000226 2.1e-06 56.6 46 56.5
SHI08425 Sapria himalayana HOM05D005471 ORTHO05D006170 2.1e-06 56.6 37 73.0
SHI17930 Sapria himalayana HOM05D003777 ORTHO05D012379 2.1e-06 56.6 49 69.4
Eucgr.K03599 Eucalyptus grandis HOM05D000219 ORTHO05D000226 2.7e-06 56.2 59 47.5
FAN04G1983 Fragaria x ananassa HOM05D000219 ORTHO05D000226 2.7e-06 56.2 44 59.1
Prupe.8G207200 Prunus persica HOM05D000219 ORTHO05D000226 2.7e-06 56.2 47 48.9
TAR362G0547 Trochodendron aralioides HOM05D000219 ORTHO05D000226 2.7e-06 56.2 59 47.5
arahy.Tifrunner.gnm1.ann1.2WV311 Arachis hypogaea HOM05D000219 ORTHO05D000226 3.6e-06 55.8 59 47.5
arahy.Tifrunner.gnm1.ann1.F7PT0Z Arachis hypogaea HOM05D000219 ORTHO05D000226 3.6e-06 55.8 59 47.5
CDE06G2257 Ceratophyllum demersum HOM05D000219 ORTHO05D000226 3.6e-06 55.8 41 56.1
Ciclev10020629m.g Citrus clementina HOM05D000219 ORTHO05D000226 3.6e-06 55.8 41 58.5
Carub.0001s2197 Capsella rubella HOM05D000219 ORTHO05D000226 4.7e-06 55.5 51 52.9
SHI22178 Sapria himalayana HOM05D006109 ORTHO05D007647 4.7e-06 55.5 47 66.0
MSTRG.22384 Avicennia marina HOM05D000219 ORTHO05D000226 6.1e-06 55.1 44 52.3
BcaC07g39161 Brassica carinata HOM05D000219 ORTHO05D000226 6.1e-06 55.1 46 56.5
A08p28510 Brassica napus HOM05D000219 ORTHO05D000226 6.1e-06 55.1 46 56.5
C08p21540 Brassica napus HOM05D000219 ORTHO05D000226 6.1e-06 55.1 46 56.5
BolC8t49794H Brassica oleracea HOM05D000219 ORTHO05D000226 6.1e-06 55.1 46 56.5
SEGI_25412 Sequoiadendron giganteum HOM05D000219 ORTHO05D000226 6.1e-06 55.1 46 56.5
Cpa.g.sc8.185 Carica papaya HOM05D000219 ORTHO05D000226 7.9e-06 54.7 59 47.5
AUR62008886 Chenopodium quinoa HOM05D000219 ORTHO05D000226 7.9e-06 54.7 59 49.2
AUR62031822 Chenopodium quinoa HOM05D000219 ORTHO05D000226 7.9e-06 54.7 59 49.2
HPP92_015003 Vanilla planifolia HOM05D000219 ORTHO05D000226 7.9e-06 54.7 41 56.1


User provided reference genes

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