Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI49521 Sapria himalayana HOM05D002876 ORTHO05D000106 2.0e-134 482.3 218 100.0
SHI44382 Sapria himalayana HOM05D002876 ORTHO05D000106 2.1e-59 233.0 222 55.0
SHI50624 Sapria himalayana HOM05D002876 ORTHO05D000106 1.0e-48 197.6 152 64.5
SHI34039 Sapria himalayana HOM05D002876 ORTHO05D000106 1.7e-48 196.8 159 62.9
SHI46601 Sapria himalayana HOM05D002876 ORTHO05D000106 2.9e-48 196.1 154 68.2
SHI22888 Sapria himalayana HOM05D002876 ORTHO05D007253 9.3e-47 191.0 194 52.6
SHI35342 Sapria himalayana HOM05D002876 ORTHO05D000106 1.3e-45 187.2 159 63.5
SHI18201 Sapria himalayana HOM05D000176 ORTHO05D000106 1.9e-44 183.3 147 63.3
SHI25246 Sapria himalayana HOM05D002876 ORTHO05D000106 2.1e-43 179.9 166 58.4
SHI21406 Sapria himalayana HOM05D002876 ORTHO05D000106 2.6e-41 172.9 218 49.1
SHI53844 Sapria himalayana HOM05D002876 ORTHO05D000106 7.9e-38 161.4 95 73.7
SHI39454 Sapria himalayana HOM05D002876 ORTHO05D000106 5.1e-37 158.7 154 54.5
SHI52848 Sapria himalayana HOM05D002876 ORTHO05D000106 7.4e-36 154.8 86 79.1
SHI40807 Sapria himalayana HOM05D002876 ORTHO05D000106 3.7e-35 152.5 152 55.3
SHI34865 Sapria himalayana HOM05D002876 ORTHO05D000106 3.4e-33 146.0 154 56.5
SHI18678 Sapria himalayana HOM05D002876 ORTHO05D000106 1.0e-32 144.4 131 58.8
SHI47274 Sapria himalayana HOM05D002876 ORTHO05D000106 1.0e-32 144.4 132 57.6
SHI48627 Sapria himalayana HOM05D002876 ORTHO05D000106 5.0e-32 142.1 133 56.4
SHI47645 Sapria himalayana HOM05D002876 ORTHO05D000106 6.5e-32 141.7 102 67.6
SHI37420 Sapria himalayana HOM05D002876 ORTHO05D007253 1.1e-31 141.0 140 55.0
SHI45281 Sapria himalayana HOM05D000176 ORTHO05D000106 2.5e-31 139.8 138 54.3
SHI29980 Sapria himalayana HOM05D002876 ORTHO05D007253 9.4e-31 137.9 125 56.8
SHI48820 Sapria himalayana HOM05D002876 ORTHO05D000106 7.9e-30 134.8 133 53.4
SHI44348 Sapria himalayana HOM05D002876 ORTHO05D000106 6.7e-29 131.7 132 53.0
SHI49466 Sapria himalayana HOM05D002876 ORTHO05D000106 8.8e-29 131.3 155 47.1
SHI45571 Sapria himalayana HOM05D002876 ORTHO05D000106 1.1e-28 131.0 129 55.0
SHI01220 Sapria himalayana HOM05D002876 ORTHO05D000106 1.5e-28 130.6 133 54.9
SHI07627 Sapria himalayana HOM05D028255 ORTHO05D000106 2.6e-28 129.8 146 51.4
SHI49225 Sapria himalayana HOM05D002876 ORTHO05D000106 4.8e-27 125.6 159 47.8
SHI07637 Sapria himalayana HOM05D002876 ORTHO05D000106 1.1e-26 124.4 146 48.6
SHI24795 Sapria himalayana HOM05D002876 ORTHO05D000106 3.1e-26 122.9 146 46.6
SHI43790 Sapria himalayana HOM05D002876 ORTHO05D000106 4.1e-26 122.5 64 84.4
SHI44118 Sapria himalayana HOM05D002876 ORTHO05D000106 4.1e-26 122.5 64 84.4
SHI33134 Sapria himalayana HOM05D002876 ORTHO05D000013 1.3e-24 117.5 56 87.5
SHI25064 Sapria himalayana HOM05D002876 ORTHO05D000106 2.9e-24 116.3 111 55.0
SHI28069 Sapria himalayana HOM05D002876 ORTHO05D000106 6.5e-24 115.2 79 63.3
SHI19007 Sapria himalayana HOM05D002876 ORTHO05D000106 1.1e-23 114.4 133 47.4
SHI28372 Sapria himalayana HOM05D002876 ORTHO05D000106 7.2e-23 111.7 74 67.6
SHI52801 Sapria himalayana HOM05D002876 ORTHO05D000106 1.2e-22 110.9 121 52.1
SHI26760 Sapria himalayana HOM05D000105 ORTHO05D000013 1.6e-22 110.5 134 48.5
SHI47682 Sapria himalayana HOM05D000024 ORTHO05D000007 3.6e-22 109.4 58 81.0
SHI50194 Sapria himalayana HOM05D002876 ORTHO05D007253 7.9e-22 108.2 58 82.8
SHI35392 Sapria himalayana HOM05D002876 ORTHO05D000106 1.0e-21 107.8 64 78.1
SHI46056 Sapria himalayana HOM05D002876 ORTHO05D000106 3.9e-21 105.9 70 70.0
SHI46131 Sapria himalayana HOM05D002876 ORTHO05D000106 3.9e-21 105.9 70 70.0
SHI48812 Sapria himalayana HOM05D002876 ORTHO05D007253 8.8e-21 104.8 58 81.0
SHI44696 Sapria himalayana HOM05D002876 ORTHO05D007253 2.6e-20 103.2 58 79.3
SHI48605 Sapria himalayana HOM05D002876 ORTHO05D007253 7.4e-20 101.7 154 40.9
SHI37231 Sapria himalayana HOM05D002876 ORTHO05D007253 9.7e-20 101.3 70 67.1
SHI06307 Sapria himalayana HOM05D002876 ORTHO05D000106 1.3e-19 100.9 202 38.6
SHI27674 Sapria himalayana HOM05D002876 ORTHO05D000106 1.7e-19 100.5 154 40.3
SHI36318 Sapria himalayana HOM05D002876 ORTHO05D000106 1.7e-19 100.5 58 74.1
SHI50010 Sapria himalayana HOM05D002876 ORTHO05D007253 2.2e-19 100.1 59 72.9
SHI49434 Sapria himalayana HOM05D002876 ORTHO05D000106 3.7e-19 99.4 58 79.3
SHI15236 Sapria himalayana HOM05D002876 ORTHO05D000106 4.8e-19 99.0 128 46.9
SHI18599 Sapria himalayana HOM05D002876 ORTHO05D000106 6.3e-19 98.6 186 34.4
SHI18159 Sapria himalayana HOM05D002876 ORTHO05D000106 5.3e-18 95.5 68 69.1
SHI36669 Sapria himalayana HOM05D002876 ORTHO05D000106 1.6e-17 94.0 53 81.1
SHI37650 Sapria himalayana HOM05D002876 ORTHO05D000106 1.6e-17 94.0 57 75.4
SHI43134 Sapria himalayana HOM05D002876 ORTHO05D000106 1.6e-17 94.0 127 45.7
SHI21213 Sapria himalayana HOM05D000200 ORTHO05D001546 2.9e-16 89.7 69 63.8
SHI32832 Sapria himalayana HOM05D002876 ORTHO05D000106 2.9e-16 89.7 133 45.1
SHI50933 Sapria himalayana HOM05D002876 ORTHO05D000106 2.5e-15 86.7 47 87.2
SHI10873 Sapria himalayana HOM05D002876 ORTHO05D000106 3.2e-15 86.3 58 74.1
SHI04238 Sapria himalayana HOM05D000105 ORTHO05D000023 5.5e-15 85.5 53 73.6
SHI14630 Sapria himalayana HOM05D002876 ORTHO05D000106 1.2e-14 84.3 93 49.5
SHI01003 Sapria himalayana HOM05D002876 ORTHO05D003118 3.6e-14 82.8 53 71.7
QL02p103239 Quercus lobata HOM05D000176 ORTHO05D000106 4.7e-14 82.4 131 35.9
SHI08737 Sapria himalayana HOM05D028255 ORTHO05D000106 4.7e-14 82.4 92 51.1
SHI28494 Sapria himalayana HOM05D002876 ORTHO05D000106 6.1e-14 82.0 58 58.6
SHI03376 Sapria himalayana HOM05D002876 ORTHO05D000106 8.0e-14 81.6 84 50.0
SHI22591 Sapria himalayana HOM05D002876 ORTHO05D000106 8.0e-14 81.6 182 32.4
SHI40806 Sapria himalayana HOM05D025709 ORTHO05D000106 1.0e-13 81.3 40 82.5
SHI07397 Sapria himalayana HOM05D002876 ORTHO05D000106 4.0e-13 79.3 58 58.6
ClCG11G000230 Citrullus lanatus HOM05D000176 ORTHO05D000106 1.2e-12 77.8 97 40.2
MELO3C022946.2 Cucumis melo HOM05D000176 ORTHO05D000106 2.0e-12 77.0 97 41.2
SHI33825 Sapria himalayana HOM05D002876 ORTHO05D000106 2.6e-12 76.6 197 34.0
SHI05518 Sapria himalayana HOM05D002876 ORTHO05D000106 5.7e-12 75.5 46 69.6
SHI29384 Sapria himalayana HOM05D002876 ORTHO05D007253 7.5e-12 75.1 53 66.0
TWI79G1140 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 7.5e-12 75.1 117 37.6
CsaV3_5G015580 Cucumis sativus L. HOM05D000176 ORTHO05D000106 1.7e-11 73.9 97 40.2
Sed0014738 Sechium edule HOM05D000176 ORTHO05D000106 3.7e-11 72.8 97 39.2
TWI38G1670 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 3.7e-11 72.8 109 38.5
GSVIVG01026490001 Vitis vinifera HOM05D000176 ORTHO05D000106 3.7e-11 72.8 176 31.2
Ah.02g116630 Amaranthus hybridus HOM05D000176 ORTHO05D000106 6.3e-11 72.0 98 35.7
SHI13454 Sapria himalayana HOM05D002876 ORTHO05D000106 1.4e-10 70.9 38 78.9
SHI26138 Sapria himalayana HOM05D000176 ORTHO05D000106 1.4e-10 70.9 58 60.3
SHI08076 Sapria himalayana HOM05D002876 ORTHO05D000106 1.8e-10 70.5 130 37.7
TWI09G0001 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 2.4e-10 70.1 98 40.8
TWI31G0542 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 2.4e-10 70.1 98 40.8
TWI56G0332 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 2.4e-10 70.1 98 40.8
TWI75G1856 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 2.4e-10 70.1 98 40.8
SHI48035 Sapria himalayana HOM05D002876 ORTHO05D000106 4.1e-10 69.3 100 43.0
TWI31G0719 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 7.0e-10 68.6 109 38.5
GSVIVG01024539001 Vitis vinifera HOM05D000176 ORTHO05D000106 7.0e-10 68.6 77 45.5
THA.LOC104802612 Tarenaya hassleriana HOM05D000176 ORTHO05D003511 2.0e-09 67.0 96 38.5
SHI53048 Sapria himalayana HOM05D002876 ORTHO05D000106 3.5e-09 66.2 34 85.3
AT1G48120 Arabidopsis thaliana HOM05D000176 ORTHO05D003511 4.5e-09 65.9 96 38.5
SHI09521 Sapria himalayana HOM05D002876 ORTHO05D000106 4.5e-09 65.9 77 45.5
SHI04704 Sapria himalayana HOM05D002876 ORTHO05D000106 1.0e-08 64.7 48 62.5
AL1G54690 Arabidopsis lyrata HOM05D000176 ORTHO05D003511 1.3e-08 64.3 96 37.5
Carub.0001s3722 Capsella rubella HOM05D000176 ORTHO05D003511 1.3e-08 64.3 96 37.5
SHI04587 Sapria himalayana HOM05D028255 ORTHO05D000106 1.3e-08 64.3 78 44.9
A06p04680 Brassica napus HOM05D000176 ORTHO05D003511 1.7e-08 63.9 96 38.5
BraA06t23671Z Brassica rapa HOM05D000176 ORTHO05D003511 1.7e-08 63.9 96 38.5
Thhalv10011184m.g Eutrema salsugineum HOM05D000176 ORTHO05D003511 2.2e-08 63.5 96 37.5
Sp1g35090 Schrenkiella parvula HOM05D000176 ORTHO05D003511 2.2e-08 63.5 96 37.5
TWI75G0639 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 2.2e-08 63.5 81 38.3
Aa31LG10G5620 Aethionema arabicum HOM05D000176 ORTHO05D003511 2.9e-08 63.2 96 37.5
CARHR037760 Cardamine hirsuta HOM05D000176 ORTHO05D003511 2.9e-08 63.2 96 37.5
Zm00001eb373420 Zea mays HOM05D000176 ORTHO05D000106 2.9e-08 63.2 106 34.0
arahy.Tifrunner.gnm1.ann1.6TXF5J Arachis hypogaea HOM05D000176 ORTHO05D000106 3.8e-08 62.8 100 34.0
C06p02530 Brassica napus HOM05D000176 ORTHO05D003511 3.8e-08 62.8 96 37.5
BolC6t35381H Brassica oleracea HOM05D000176 ORTHO05D003511 3.8e-08 62.8 96 37.5
SHI43954 Sapria himalayana HOM05D002876 ORTHO05D000106 3.8e-08 62.8 39 74.4
Ca_23329_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 6.5e-08 62.0 91 34.1
Lj3g0023710 Lotus japonicus HOM05D000176 ORTHO05D000106 6.5e-08 62.0 99 35.4
QL09p008289 Quercus lobata HOM05D001043 ORTHO05D000106 8.5e-08 61.6 108 33.3
Psat4g187840 Pisum sativum HOM05D000176 ORTHO05D000106 1.1e-07 61.2 91 31.9
arahy.Tifrunner.gnm1.ann1.PINR01 Arachis hypogaea HOM05D000176 ORTHO05D000106 1.5e-07 60.8 100 33.0
Os02g0592600 Oryza sativa ssp. japonica HOM05D000176 ORTHO05D000106 1.5e-07 60.8 118 33.1
Os01g0531200 Oryza sativa ssp. japonica HOM05D000176 ORTHO05D000106 1.9e-07 60.5 106 34.0
Os01g0738500 Oryza sativa ssp. japonica HOM05D000176 ORTHO05D000106 1.9e-07 60.5 106 34.0
Dinv18200 Davidia involucrata HOM05D000176 ORTHO05D000106 2.5e-07 60.1 99 36.4
SHI01671 Sapria himalayana HOM05D000176 ORTHO05D000106 2.5e-07 60.1 47 59.6
ClCG06G006800 Citrullus lanatus HOM05D000176 ORTHO05D000013 3.2e-07 59.7 107 31.8
CSS0002500 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 4.2e-07 59.3 99 35.4
CSS0014815 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 4.2e-07 59.3 99 35.4
SHI17080 Sapria himalayana HOM05D002876 ORTHO05D000106 4.2e-07 59.3 38 68.4
SHI29223 Sapria himalayana HOM05D002876 ORTHO05D007253 5.5e-07 58.9 46 58.7
Aa31sc575G20 Aethionema arabicum HOM05D000176 ORTHO05D000106 7.2e-07 58.5 92 31.5
SHI33133 Sapria himalayana HOM05D002876 ORTHO05D000106 9.4e-07 58.2 49 59.2
Hund07743 Selenicereus undatus HOM05D000176 ORTHO05D000106 9.4e-07 58.2 92 32.6
GSVIVG01006780001 Vitis vinifera HOM05D000176 ORTHO05D000106 9.4e-07 58.2 100 31.0
Atru.chr6.3553_Atru.chr6.3554 Acer truncatum HOM05D000176 ORTHO05D000106 1.2e-06 57.8 95 31.6
CARHR102890 Cardamine hirsuta HOM05D000176 ORTHO05D000106 1.2e-06 57.8 95 29.5
Sabra01G0157300 Salix brachista HOM05D000176 ORTHO05D000106 1.2e-06 57.8 100 30.0
AL3G42490 Arabidopsis lyrata HOM05D000176 ORTHO05D000106 1.6e-06 57.4 92 29.3
RcHm_v2.0_Chr2g0150841 Rosa chinensis HOM05D000176 ORTHO05D000106 1.6e-06 57.4 92 32.6
SHI17108 Sapria himalayana HOM05D002876 ORTHO05D000106 2.1e-06 57.0 130 33.1
FvH4_6g37771 Fragaria vesca HOM05D000176 ORTHO05D000106 2.7e-06 56.6 95 31.6
Sabra02G0169600 Salix brachista HOM05D000176 ORTHO05D000106 2.7e-06 56.6 92 31.5
Solyc05g056010.3 Solanum lycopersicum HOM05D000176 ORTHO05D000106 2.7e-06 56.6 88 35.2
Sopen05g034420 Solanum pennellii HOM05D000176 ORTHO05D000106 2.7e-06 56.6 88 35.2
PGSC0003DMG400023346 Solanum tuberosum HOM05D000176 ORTHO05D000106 2.7e-06 56.6 88 35.2
GSVIVG01000818001 Vitis vinifera HOM05D000176 ORTHO05D000106 2.7e-06 56.6 99 31.3
CSS0028049 Camellia sinensis var. sinensis HOM05D001875 ORTHO05D000106 4.7e-06 55.8 48 50.0
CSS0045164 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 4.7e-06 55.8 48 50.0
ClCG09G013770 Citrullus lanatus HOM05D000176 ORTHO05D000106 4.7e-06 55.8 95 28.4
Cc03_g14530 Coffea canephora HOM05D000176 ORTHO05D000106 6.1e-06 55.5 81 35.8
Lalb_Chr20g0114151 Lupinus albus HOM05D000176 ORTHO05D000106 6.1e-06 55.5 101 32.7
SHI34850 Sapria himalayana HOM05D000176 ORTHO05D000106 6.1e-06 55.5 45 55.6
Duzib138G0102 Durio zibethinus HOM05D000176 ORTHO05D000106 8.0e-06 55.1 92 31.5
Migut.K00126 Erythranthe guttata HOM05D000176 ORTHO05D000106 8.0e-06 55.1 95 31.6
Lj8C735T3 Lonicera japonica HOM05D000176 ORTHO05D000106 8.0e-06 55.1 99 29.3
SHI07655 Sapria himalayana HOM05D002876 ORTHO05D007253 8.0e-06 55.1 68 50.0


User provided reference genes

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