Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI49510 Sapria himalayana HOM05D001560 ORTHO05D003613 1.5e-189 666.0 338 100.0
SHI45575 Sapria himalayana HOM05D001560 ORTHO05D003613 3.3e-160 568.5 372 82.8
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 3.0e-153 545.4 353 82.4
SHI38584 Sapria himalayana HOM05D001560 ORTHO05D003613 2.6e-149 532.3 351 81.2
SHI38561 Sapria himalayana HOM05D001560 ORTHO05D003613 5.0e-148 528.1 351 80.6
SHI38463 Sapria himalayana HOM05D001560 ORTHO05D003613 4.0e-145 518.5 384 74.2
Hma1.2p1_0261F.1_g105120 Hydrangea macrophylla HOM05D001560 ORTHO05D003613 2.2e-140 502.7 378 72.5
CANSAT16G0039 Cannabis sativa HOM05D001560 ORTHO05D003613 2.9e-140 502.3 380 72.9
Lj2C1229T3 Lonicera japonica HOM05D001560 ORTHO05D003613 2.9e-140 502.3 378 72.5
ATMG00520 Arabidopsis thaliana HOM05D001560 ORTHO05D003613 3.8e-140 501.9 379 72.8
CARHR282880 Cardamine hirsuta HOM05D001560 ORTHO05D003613 6.5e-140 501.1 379 72.8
Nn1g10043 Nelumbo nucifera HOM05D001560 ORTHO05D003613 1.6e-138 496.5 378 72.0
Nn4g26006 Nelumbo nucifera HOM05D001560 ORTHO05D003613 1.6e-138 496.5 378 72.0
BolSC28t60329H Brassica oleracea HOM05D001560 ORTHO05D003613 4.7e-138 495.0 380 72.1
BraSC77t46661Z Brassica rapa HOM05D001560 ORTHO05D003613 4.7e-138 495.0 380 72.1
Sp3g25920 Schrenkiella parvula HOM05D001560 ORTHO05D003613 4.7e-138 495.0 380 72.1
ClCG10G004690 Citrullus lanatus HOM05D001560 ORTHO05D003613 6.1e-138 494.6 379 72.0
HanXRQMTg0579631 Helianthus annuus HOM05D001560 ORTHO05D003613 1.8e-137 493.0 378 71.2
Actinidia34853 Actinidia chinensis HOM05D001560 ORTHO05D003613 4.0e-137 491.9 378 71.7
Sed0013276 Sechium edule HOM05D001560 ORTHO05D003613 4.0e-137 491.9 379 71.8
SGA_v2.0_scaffold255G45496 Striga asiatica HOM05D001560 ORTHO05D003613 9.8e-136 487.3 376 71.8
Sc04g0005570 Simmondsia chinensis HOM05D001560 ORTHO05D003613 2.8e-135 485.7 378 70.9
Lalb_Chr00c21g0406061 Lupinus albus HOM05D001560 ORTHO05D003613 3.7e-135 485.3 384 70.3
Lalb_Chr00c39g0409051 Lupinus albus HOM05D001560 ORTHO05D003613 3.7e-135 485.3 384 70.3
Lalb_Chr00c39g0409231 Lupinus albus HOM05D001560 ORTHO05D003613 3.7e-135 485.3 384 70.3
Lalb_Chr00c51g0413141 Lupinus albus HOM05D001560 ORTHO05D003613 3.7e-135 485.3 384 70.3
CAN.G1180.6 Capsicum annuum HOM05D001560 ORTHO05D003613 8.3e-135 484.2 378 70.9
PGR028G0023 Punica granatum HOM05D001560 ORTHO05D003613 1.1e-134 483.8 379 71.0
PGR071G0003 Punica granatum HOM05D001560 ORTHO05D003613 1.1e-134 483.8 379 71.0
LjContig00315g0001212 Lotus japonicus HOM05D001560 ORTHO05D003613 3.1e-134 482.3 382 70.7
DCAR_032442 Daucus carota HOM05D001560 ORTHO05D003613 1.2e-133 480.3 378 70.6
AUR62042345 Chenopodium quinoa HOM05D001560 ORTHO05D003613 8.5e-132 474.2 378 69.8
SabraMtG0009600 Salix brachista HOM05D001560 ORTHO05D003613 4.2e-131 471.9 377 71.1
Nn1g09975 Nelumbo nucifera HOM05D001560 ORTHO05D003613 6.1e-130 468.0 357 72.0
Ah.10g028460 Amaranthus hybridus HOM05D001560 ORTHO05D003613 5.2e-129 464.9 378 68.3
SHI36625 Sapria himalayana HOM05D001560 ORTHO05D003613 8.8e-129 464.2 342 73.4
Hund27586 Selenicereus undatus HOM05D001560 ORTHO05D003613 4.9e-127 458.4 379 69.1
Hund27816 Selenicereus undatus HOM05D001560 ORTHO05D003613 4.9e-127 458.4 379 69.1
Hund27900 Selenicereus undatus HOM05D001560 ORTHO05D003613 4.9e-127 458.4 379 69.1
Hund28069 Selenicereus undatus HOM05D001560 ORTHO05D003613 4.9e-127 458.4 379 69.1
Hund28082 Selenicereus undatus HOM05D001560 ORTHO05D003613 4.9e-127 458.4 379 69.1
Hund28866 Selenicereus undatus HOM05D001560 ORTHO05D003613 4.9e-127 458.4 379 69.1
Hund28883 Selenicereus undatus HOM05D001560 ORTHO05D003613 4.9e-127 458.4 379 69.1
Hund29205 Selenicereus undatus HOM05D001560 ORTHO05D003613 4.9e-127 458.4 379 69.1
Cpa.g.sc89.22 Carica papaya HOM05D001560 ORTHO05D003613 6.3e-127 458.0 343 73.5
arahy.Tifrunner.gnm1.ann1.7G246T Arachis hypogaea HOM05D001560 ORTHO05D003613 2.9e-124 449.1 370 68.9
arahy.Tifrunner.gnm1.ann1.JTWL6Q Arachis hypogaea HOM05D001560 ORTHO05D003613 8.6e-124 447.6 362 70.2
Ca_14833_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 1.5e-123 446.8 345 72.5
Ca_22165_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 1.5e-123 446.8 345 72.5
SHI36584 Sapria himalayana HOM05D001560 ORTHO05D003613 5.7e-120 434.9 332 73.5
Potri.007G062302 Populus trichocarpa HOM05D001560 ORTHO05D003613 7.5e-120 434.5 341 72.1
SHI35000 Sapria himalayana HOM05D001560 ORTHO05D003613 2.4e-118 429.5 301 78.7
Sopen11g018210 Solanum pennellii HOM05D001560 ORTHO05D003613 5.9e-117 424.9 342 70.2
Dinv06700 Davidia involucrata HOM05D001560 ORTHO05D003613 1.7e-116 423.3 375 64.5
CsaV3_UNG210420 Cucumis sativus L. HOM05D001560 ORTHO05D003613 2.3e-113 412.9 370 64.6
SHI37085 Sapria himalayana HOM05D001560 ORTHO05D004675 2.0e-112 409.8 256 85.9
SHI36270 Sapria himalayana HOM05D001560 ORTHO05D003613 2.4e-110 402.9 371 63.3
SHI35327 Sapria himalayana HOM05D001560 ORTHO05D003613 3.5e-109 399.1 285 77.9
Hund29084 Selenicereus undatus HOM05D001560 ORTHO05D003613 3.5e-109 399.1 323 70.6
CDE02G0303 Ceratophyllum demersum HOM05D001560 ORTHO05D003613 4.3e-107 392.1 360 64.2
unitig_87.g27957 Utricularia gibba HOM05D001560 ORTHO05D003613 9.5e-107 391.0 336 68.5
Hund12886 Selenicereus undatus HOM05D001560 ORTHO05D003613 4.0e-105 385.6 378 61.6
COL.COLO4_04089 Corchorus olitorius HOM05D001560 ORTHO05D003613 1.1e-102 377.5 316 68.0
HanXRQChr09g0251121 Helianthus annuus HOM05D001560 ORTHO05D003613 1.1e-102 377.5 317 67.2
RhsimMtG0005500 Rhododendron simsii HOM05D001560 ORTHO05D003613 1.2e-101 374.0 315 68.6
HanXRQChr10g0297191 Helianthus annuus HOM05D001560 ORTHO05D003613 8.6e-100 367.9 337 64.4
TPR.G162 Trifolium pratense HOM05D001560 ORTHO05D003613 2.8e-98 362.8 284 71.8
AL3G44410 Arabidopsis lyrata HOM05D001560 ORTHO05D003613 2.3e-97 359.8 260 75.8
Sed0003843 Sechium edule HOM05D001560 ORTHO05D003613 1.9e-94 350.1 379 57.5
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 5.4e-94 348.6 372 57.0
SHI36372 Sapria himalayana HOM05D001560 ORTHO05D003613 1.2e-93 347.4 216 88.4
SHI38843 Sapria himalayana HOM05D001560 ORTHO05D003613 1.7e-92 343.6 218 83.9
HanXRQChr01g0012841 Helianthus annuus HOM05D001560 ORTHO05D003613 8.6e-92 341.3 320 63.1
SHI46061 Sapria himalayana HOM05D001560 ORTHO05D003613 2.8e-90 336.3 204 85.8
Gorai.005G104100 Gossypium raimondii HOM05D001560 ORTHO05D003613 8.9e-89 331.3 300 63.7
SHI40317 Sapria himalayana HOM05D001560 ORTHO05D003613 2.4e-86 323.2 368 55.4
SHI37900 Sapria himalayana HOM05D001560 ORTHO05D003613 4.6e-85 318.9 342 57.3
Hund12883 Selenicereus undatus HOM05D001560 ORTHO05D003613 3.3e-83 312.8 310 62.3
Solyc09g056070.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 3.3e-83 312.8 265 67.2
AUR62038665 Chenopodium quinoa HOM05D001560 ORTHO05D003613 4.3e-83 312.4 256 68.4
Lsat_1_v5_gn_5_16600 Lactuca sativa HOM05D001560 ORTHO05D003613 3.1e-81 306.2 345 55.7
SHI36381 Sapria himalayana HOM05D001560 ORTHO05D003613 1.1e-78 297.7 377 53.1
CAN.G745.35 Capsicum annuum HOM05D001560 ORTHO05D003613 4.6e-77 292.4 256 66.0
SHI34996 Sapria himalayana HOM05D001560 ORTHO05D003613 6.2e-74 282.0 311 57.6
arahy.Tifrunner.gnm1.ann1.K9CWE8 Arachis hypogaea HOM05D001560 ORTHO05D003613 1.1e-73 281.2 341 54.3
Nitab4.5_0000886g0180 Nicotiana tabacum HOM05D001560 ORTHO05D003613 3.8e-71 272.7 381 46.5
Lsat_1_v5_gn_3_89520 Lactuca sativa HOM05D001560 ORTHO05D003613 1.2e-69 267.7 311 54.0
CSS0047048 Camellia sinensis var. sinensis HOM05D001560 ORTHO05D003613 4.6e-69 265.8 326 52.8
Peaxi162Scf00348g00514 Petunia axillaris HOM05D001560 ORTHO05D003613 2.8e-66 256.5 246 62.2
SHI37382 Sapria himalayana HOM05D001560 ORTHO05D003613 1.3e-63 247.7 163 79.8
Lsat_1_v5_gn_4_121001 Lactuca sativa HOM05D001560 ORTHO05D003613 7.9e-61 238.4 173 76.9
SHI27345 Sapria himalayana HOM05D001560 ORTHO05D003613 1.0e-60 238.0 171 73.7
ClCG06G008570 Citrullus lanatus HOM05D001560 ORTHO05D003613 1.5e-59 234.2 250 58.0
CAN.G1321.15 Capsicum annuum HOM05D001560 ORTHO05D003613 2.5e-59 233.4 223 61.4
Nn4g26009 Nelumbo nucifera HOM05D001560 ORTHO05D003613 2.5e-59 233.4 174 73.0
SHI54049 Sapria himalayana HOM05D001560 ORTHO05D003613 4.8e-58 229.2 172 72.1
SHI38532 Sapria himalayana HOM05D001560 ORTHO05D003613 1.4e-57 227.6 151 78.8
SHI34605 Sapria himalayana HOM05D001560 ORTHO05D003613 2.4e-57 226.9 371 43.7
PSO675G8388 Papaver somniferum HOM05D001560 ORTHO05D003613 2.6e-56 223.4 198 62.1
BraSC48t46281Z Brassica rapa HOM05D001560 ORTHO05D003613 1.0e-55 221.5 182 67.0
Peaxi162Scf00622g00016 Petunia axillaris HOM05D001560 ORTHO05D003613 5.5e-54 215.7 208 60.1
SHI43894 Sapria himalayana HOM05D001560 ORTHO05D003613 1.6e-53 214.2 365 42.2
Nn4g26010 Nelumbo nucifera HOM05D001560 ORTHO05D003613 1.0e-52 211.5 174 66.7
SEGI_16710 Sequoiadendron giganteum HOM05D001560 ORTHO05D003613 2.5e-51 206.8 381 40.7
SEGI_26668 Sequoiadendron giganteum HOM05D001560 ORTHO05D003613 7.4e-51 205.3 381 40.4
SHI37855 Sapria himalayana HOM05D001560 ORTHO05D003613 8.5e-47 191.8 164 65.9
Hund29341 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.6e-45 187.6 146 72.6
Nitab4.5_0000307g0350 Nicotiana tabacum HOM05D001560 ORTHO05D003613 1.8e-44 184.1 159 63.5
Nitab4.5_0001152g0950 Nicotiana tabacum HOM05D001560 ORTHO05D003613 7.4e-43 178.7 326 42.9
CARHR287190 Cardamine hirsuta HOM05D001560 ORTHO05D003613 8.2e-42 175.3 148 64.2
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 4.1e-41 172.9 90 93.3
Nitab4.5_0000307g0340 Nicotiana tabacum HOM05D001560 ORTHO05D003613 9.1e-41 171.8 193 56.5
SHI36374 Sapria himalayana HOM05D001560 ORTHO05D003613 5.9e-40 169.1 90 91.1
SHI37134 Sapria himalayana HOM05D001560 ORTHO05D003613 1.0e-39 168.3 90 91.1
Nitab4.5_0002739g0180 Nicotiana tabacum HOM05D001560 ORTHO05D003613 9.4e-38 161.8 129 73.6
BolSC28t60405H Brassica oleracea HOM05D001560 ORTHO05D003613 2.1e-37 160.6 106 76.4
BolSC28t60433H Brassica oleracea HOM05D001560 ORTHO05D003613 2.1e-37 160.6 106 76.4
SHI51797 Sapria himalayana HOM05D001560 ORTHO05D003613 2.7e-37 160.2 120 68.3
ClCG10G004710 Citrullus lanatus HOM05D001560 ORTHO05D003613 4.7e-37 159.5 237 47.3
CAN.G497.19 Capsicum annuum HOM05D001560 ORTHO05D003613 2.3e-36 157.1 145 62.1
Lsat_1_v5_gn_6_108960 Lactuca sativa HOM05D001560 ORTHO05D003613 5.2e-36 156.0 110 72.7
ATR0693G347 Amborella trichopoda HOM05D001560 ORTHO05D003613 5.7e-35 152.5 148 62.2
Hma1.2p1_0079F.1_g041900 Hydrangea macrophylla HOM05D001560 ORTHO05D003613 2.2e-34 150.6 107 71.0
Solyc11g030890.3 Solanum lycopersicum HOM05D001560 ORTHO05D003613 1.4e-33 147.9 190 52.6
CAN.G85.15 Capsicum annuum HOM05D001560 ORTHO05D003613 1.2e-32 144.8 222 44.6
Peaxi162Scf00931g00038 Petunia axillaris HOM05D001560 ORTHO05D003613 2.0e-32 144.1 154 56.5
SHI38214 Sapria himalayana HOM05D001560 ORTHO05D003613 3.5e-32 143.3 81 86.4
GSVIVG01006203001 Vitis vinifera HOM05D001560 ORTHO05D003613 2.9e-31 140.2 80 81.2
Sopen09g021510 Solanum pennellii HOM05D001560 ORTHO05D013554 1.1e-30 138.3 105 73.3
TWI75G1342 Tripterygium wilfordii HOM05D001560 ORTHO05D003613 1.6e-29 134.4 126 62.7
HanXRQChr08g0236181 Helianthus annuus HOM05D001560 ORTHO05D003613 2.6e-27 127.1 88 73.9
CSS0014898 Camellia sinensis var. sinensis HOM05D001560 ORTHO05D003613 1.3e-26 124.8 88 72.7
SHI53219 Sapria himalayana HOM05D001560 ORTHO05D003613 4.8e-26 122.9 83 74.7
Psat1g001600 Pisum sativum HOM05D001560 ORTHO05D003613 8.2e-26 122.1 87 75.9
Solyc03g013220.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 9.1e-25 118.6 110 65.5
SHI36773 Sapria himalayana HOM05D001560 ORTHO05D010994 1.2e-24 118.2 79 77.2
SHI36784 Sapria himalayana HOM05D001560 ORTHO05D010994 1.2e-24 118.2 79 77.2
Peaxi162Scf00348g00515 Petunia axillaris HOM05D001560 ORTHO05D003613 1.7e-23 114.4 85 67.1
SHI45394 Sapria himalayana HOM05D001560 ORTHO05D003613 6.5e-23 112.5 64 87.5
SHI34998 Sapria himalayana HOM05D001560 ORTHO05D003613 1.1e-22 111.7 65 84.6
Solyc09g057820.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 5.5e-22 109.4 134 50.0
SHI54824 Sapria himalayana HOM05D001560 ORTHO05D003613 1.8e-20 104.4 52 92.3
CAN.G623.2 Capsicum annuum HOM05D001560 ORTHO05D003613 8.8e-20 102.1 52 88.5
SHI34636 Sapria himalayana HOM05D001560 ORTHO05D003613 2.0e-19 100.9 56 89.3
SHI35186 Sapria himalayana HOM05D000743 ORTHO05D000580 5.7e-19 99.4 77 68.8
SHI44984 Sapria himalayana HOM05D001560 ORTHO05D003613 1.7e-18 97.8 232 36.6
HanXRQChr13g0415511 Helianthus annuus HOM05D001560 ORTHO05D003613 1.8e-17 94.4 111 53.2
C01p34990 Brassica napus HOM05D001560 ORTHO05D003613 5.4e-17 92.8 125 50.4
Rhsim07G0227200 Rhododendron simsii HOM05D000187 ORTHO05D000230 4.5e-16 89.7 62 71.0
GSVIVG01000512001 Vitis vinifera HOM05D001560 ORTHO05D003613 1.1e-14 85.1 57 70.2
SHI37067 Sapria himalayana HOM05D001560 ORTHO05D010994 8.0e-13 79.0 56 69.6
Ca_14832_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 1.8e-12 77.8 65 66.2
Ca_22164_v3 Cicer arietinum L. HOM05D001560 ORTHO05D010874 1.8e-12 77.8 65 66.2
Pp3c23_18180 Physcomitrium patens HOM05D001560 ORTHO05D003613 4.9e-10 69.7 310 24.5
Oeu048658.1 Olea europaea HOM05D001560 ORTHO05D003613 8.3e-10 68.9 46 76.1
AagrBONN_evm.TU.Sc2ySwM_344.1486 Anthoceros agrestis HOM05D001560 ORTHO05D003613 3.1e-09 67.0 82 37.8
Nitab4.5_0001152g1090 Nicotiana tabacum HOM05D001560 ORTHO05D003613 1.2e-08 65.1 51 66.7
Sopen11g021670 Solanum pennellii HOM05D001560 ORTHO05D003613 1.7e-07 61.2 52 61.5
Pp3c13_4900 Physcomitrium patens HOM05D001560 ORTHO05D003613 8.6e-07 58.9 84 39.3
Pp3c2_31660 Physcomitrium patens HOM05D001560 ORTHO05D003613 1.1e-06 58.5 100 32.0
Solyc11g030880.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 1.5e-06 58.2 42 57.1
Nitab4.5_0001781g0110 Nicotiana tabacum HOM05D001560 ORTHO05D010811 7.3e-06 55.8 41 75.6


User provided reference genes

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