Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI49438 Sapria himalayana HOM05D000210 ORTHO05D005611 6.3e-70 267.3 135 100.0
SHI47298 Sapria himalayana HOM05D000210 ORTHO05D005611 4.1e-61 238.0 135 92.6
SHI48130 Sapria himalayana HOM05D000210 ORTHO05D005611 3.7e-54 214.9 141 83.0
SHI48059 Sapria himalayana HOM05D000210 ORTHO05D005611 9.2e-45 183.7 149 69.8
SHI47592 Sapria himalayana HOM05D000210 ORTHO05D005611 4.6e-44 181.4 135 74.1
SHI38641 Sapria himalayana HOM05D000210 ORTHO05D005611 2.8e-33 145.6 137 59.9
SHI37031 Sapria himalayana HOM05D000210 ORTHO05D005611 3.6e-33 145.2 137 59.9
SHI33437 Sapria himalayana HOM05D000210 ORTHO05D005611 1.1e-32 143.7 137 62.0
SHI49784 Sapria himalayana HOM05D000210 ORTHO05D005611 1.5e-31 139.8 98 75.5
SHI40250 Sapria himalayana HOM05D000210 ORTHO05D005611 1.9e-29 132.9 138 57.2
SHI37736 Sapria himalayana HOM05D000210 ORTHO05D005611 7.8e-28 127.5 97 69.1
SHI48673 Sapria himalayana HOM05D000210 ORTHO05D005611 5.1e-27 124.8 120 59.2
SHI06055 Sapria himalayana HOM05D000210 ORTHO05D005611 1.1e-26 123.6 85 72.9
SHI01933 Sapria himalayana HOM05D000210 ORTHO05D005611 1.5e-26 123.2 90 72.2
SHI15997 Sapria himalayana HOM05D000210 ORTHO05D005611 1.9e-26 122.9 97 68.0
SHI46659 Sapria himalayana HOM05D000210 ORTHO05D005611 3.3e-26 122.1 133 51.9
SHI35020 Sapria himalayana HOM05D000210 ORTHO05D005611 3.6e-25 118.6 146 50.7
SHI35107 Sapria himalayana HOM05D000210 ORTHO05D005611 4.8e-25 118.2 87 70.1
SHI03543 Sapria himalayana HOM05D000210 ORTHO05D005611 1.7e-22 109.8 80 68.8
SHI37091 Sapria himalayana HOM05D000210 ORTHO05D005611 6.4e-22 107.8 99 59.6
SHI53918 Sapria himalayana HOM05D000210 ORTHO05D005611 7.9e-20 100.9 66 75.8
Atru.chr5.1322 Acer truncatum HOM05D000210 ORTHO05D005611 1.0e-19 100.5 139 42.4
CiPaw.07G096700 Carya illinoinensis HOM05D000210 ORTHO05D005611 2.3e-19 99.4 138 44.2
Cfa006073 Carpinus fangiana HOM05D000210 ORTHO05D005611 3.0e-19 99.0 138 45.7
SHI38773 Sapria himalayana HOM05D000210 ORTHO05D005611 1.1e-18 97.1 134 47.0
SHI28943 Sapria himalayana HOM05D000210 ORTHO05D005611 2.5e-18 95.9 94 56.4
Gohir.D08G202984 Gossypium hirsutum HOM05D000210 ORTHO05D005611 5.6e-18 94.7 139 41.0
MD11G1293000 Malus domestica HOM05D000210 ORTHO05D005611 5.6e-18 94.7 138 42.8
FAN24G2823 Fragaria x ananassa HOM05D000210 ORTHO05D005611 7.4e-18 94.4 138 41.3
Gorai.004G214900 Gossypium raimondii HOM05D000210 ORTHO05D005611 7.4e-18 94.4 139 41.0
RcHm_v2.0_Chr6g0292061 Rosa chinensis HOM05D000210 ORTHO05D005611 9.6e-18 94.0 138 40.6
CANSAT25G2778 Cannabis sativa HOM05D000210 ORTHO05D005611 1.3e-17 93.6 141 39.7
SHI45120 Sapria himalayana HOM05D000210 ORTHO05D005611 1.3e-17 93.6 140 44.3
Thecc.01G286500 Theobroma cacao HOM05D000210 ORTHO05D005611 1.6e-17 93.2 140 40.7
FvH4_2g24250 Fragaria vesca HOM05D000210 ORTHO05D005611 2.8e-17 92.4 138 41.3
GSVIVG01011052001 Vitis vinifera HOM05D000210 ORTHO05D005611 2.8e-17 92.4 140 41.4
arahy.Tifrunner.gnm1.ann1.11MVEE Arachis hypogaea HOM05D000210 ORTHO05D005611 4.8e-17 91.7 139 41.0
Prupe.8G248400 Prunus persica HOM05D000210 ORTHO05D005611 4.8e-17 91.7 138 39.9
Ciclev10019466m.g Citrus clementina HOM05D000210 ORTHO05D005611 6.2e-17 91.3 139 41.0
QL12p023065 Quercus lobata HOM05D000210 ORTHO05D005611 6.2e-17 91.3 138 40.6
arahy.Tifrunner.gnm1.ann1.CG37GB Arachis hypogaea HOM05D000210 ORTHO05D005611 1.1e-16 90.5 139 40.3
FAN15G3364 Fragaria x ananassa HOM05D000210 ORTHO05D005611 1.1e-16 90.5 138 40.6
Duzib138G1044 Durio zibethinus HOM05D000210 ORTHO05D005611 1.4e-16 90.1 140 40.7
Phvul.001G147300 Phaseolus vulgaris HOM05D000210 ORTHO05D005611 1.4e-16 90.1 140 42.1
Glyma.03G149400 Glycine max HOM05D000210 ORTHO05D005611 1.8e-16 89.7 140 41.4
arahy.Tifrunner.gnm1.ann1.2F1JWB Arachis hypogaea HOM05D002837 ORTHO05D005611 2.4e-16 89.4 140 41.4
arahy.Tifrunner.gnm1.ann1.Q48K4T Arachis hypogaea HOM05D002837 ORTHO05D005611 2.4e-16 89.4 140 41.4
TAR633G2129 Trochodendron aralioides HOM05D000210 ORTHO05D005611 2.4e-16 89.4 139 41.7
Dinv11271 Davidia involucrata HOM05D000210 ORTHO05D005611 3.1e-16 89.0 139 40.3
SHI45297 Sapria himalayana HOM05D000210 ORTHO05D005611 3.1e-16 89.0 60 75.0
SHI51201 Sapria himalayana HOM05D000210 ORTHO05D005611 5.3e-16 88.2 60 73.3
Lj1g0017777 Lotus japonicus HOM05D000210 ORTHO05D005611 6.9e-16 87.8 140 40.0
Haze_04777 Corylus avellana HOM05D000210 ORTHO05D005611 9.0e-16 87.4 104 48.1
VMungo1383G3377 Vigna mungo HOM05D000210 ORTHO05D005611 1.5e-15 86.7 140 40.7
Nn4g26117 Nelumbo nucifera HOM05D000210 ORTHO05D005611 3.4e-15 85.5 139 38.8
Ah.08g212840 Amaranthus hybridus HOM05D000210 ORTHO05D005611 4.5e-15 85.1 139 38.8
Sabra14G0103200 Salix brachista HOM05D000210 ORTHO05D005611 4.5e-15 85.1 140 37.1
TPR.G32800 Trifolium pratense HOM05D000210 ORTHO05D005611 4.5e-15 85.1 139 39.6
Medtr7g094190 Medicago truncatula HOM05D000210 ORTHO05D005611 5.8e-15 84.7 141 40.4
Psat3g066840 Pisum sativum HOM05D000210 ORTHO05D005611 7.6e-15 84.3 140 42.9
Potri.014G136800 Populus trichocarpa HOM05D000210 ORTHO05D005611 7.6e-15 84.3 140 38.6
Eucgr.K03410 Eucalyptus grandis HOM05D000210 ORTHO05D005611 1.3e-14 83.6 139 39.6
vmacro14947 Vaccinium macrocarpon HOM05D000210 ORTHO05D005611 1.7e-14 83.2 139 38.8
SHI50973 Sapria himalayana HOM05D000210 ORTHO05D005611 2.2e-14 82.8 60 71.7
Hund05363 Selenicereus undatus HOM05D000210 ORTHO05D005611 6.4e-14 81.3 139 36.7
CSS0026102 Camellia sinensis var. sinensis HOM05D000210 ORTHO05D005611 8.4e-14 80.9 141 37.6
CSS0008686 Camellia sinensis var. sinensis HOM05D000210 ORTHO05D005611 1.1e-13 80.5 141 37.6
SHI48848 Sapria himalayana HOM05D000210 ORTHO05D005611 1.4e-13 80.1 83 51.8
CSS0038921 Camellia sinensis var. sinensis HOM05D000210 ORTHO05D005611 3.2e-13 79.0 139 37.4
SHI51828 Sapria himalayana HOM05D000210 ORTHO05D005611 3.2e-13 79.0 60 68.3
SHI52129 Sapria himalayana HOM05D000210 ORTHO05D005611 3.2e-13 79.0 60 68.3
Actinidia21087 Actinidia chinensis HOM05D000210 ORTHO05D005611 5.5e-13 78.2 139 37.4
SHI30997 Sapria himalayana HOM05D000210 ORTHO05D005611 5.5e-13 78.2 46 76.1
SEGI_08565 Sequoiadendron giganteum HOM05D000210 ORTHO05D005611 5.5e-13 78.2 137 37.2
Eucgr.K03411 Eucalyptus grandis HOM05D000210 ORTHO05D005611 7.1e-13 77.8 139 36.7
Lj1C42G11 Lonicera japonica HOM05D000210 ORTHO05D005611 1.2e-12 77.0 139 38.1
SHI48588 Sapria himalayana HOM05D000210 ORTHO05D005611 1.2e-12 77.0 123 43.1
SHI50213 Sapria himalayana HOM05D000210 ORTHO05D005611 2.7e-12 75.9 40 97.5
CDE09G1445 Ceratophyllum demersum HOM05D000210 ORTHO05D005611 3.5e-12 75.5 139 35.3
AUR62034578 Chenopodium quinoa HOM05D000210 ORTHO05D005611 4.6e-12 75.1 138 37.0
SHI35778 Sapria himalayana HOM05D000210 ORTHO05D005611 6.0e-12 74.7 79 55.7
SHI48821 Sapria himalayana HOM05D000210 ORTHO05D005611 7.9e-12 74.3 123 42.3
SHI42430 Sapria himalayana HOM05D000210 ORTHO05D005611 5.1e-11 71.6 48 70.8
MSTRG.21588 Avicennia marina HOM05D000210 ORTHO05D005611 2.5e-10 69.3 104 38.5
SHI25126 Sapria himalayana HOM05D000210 ORTHO05D005611 2.5e-10 69.3 68 63.2
Medtr7g094330 Medicago truncatula HOM05D000210 ORTHO05D005611 5.6e-10 68.2 129 37.2
SHI50845 Sapria himalayana HOM05D000210 ORTHO05D005611 2.1e-09 66.2 38 78.9
SHI51420 Sapria himalayana HOM05D000210 ORTHO05D005611 2.1e-09 66.2 94 46.8
SHI37216 Sapria himalayana HOM05D000210 ORTHO05D005611 4.8e-09 65.1 37 78.4
SHI52541 Sapria himalayana HOM05D000210 ORTHO05D005611 4.8e-09 65.1 39 74.4
MBI17_g12076_MAGBIO Magnolia biondii HOM05D000210 ORTHO05D005611 1.1e-08 63.9 97 40.2
Gohir.A08G184800 Gossypium hirsutum HOM05D000210 ORTHO05D005611 1.8e-08 63.2 48 62.5
SHI38302 Sapria himalayana HOM05D000210 ORTHO05D005611 1.8e-08 63.2 94 47.9
COL.COLO4_09151 Corchorus olitorius HOM05D000210 ORTHO05D005611 5.3e-08 61.6 47 57.4
SHI36274 Sapria himalayana HOM05D000210 ORTHO05D005611 6.9e-08 61.2 36 75.0
SHI50019 Sapria himalayana HOM05D000210 ORTHO05D005611 1.2e-07 60.5 122 36.1
Ca_08554_v3 Cicer arietinum L. HOM05D000210 ORTHO05D005611 2.0e-07 59.7 108 38.0
Ca_08588_v3 Cicer arietinum L. HOM05D000210 ORTHO05D005611 2.0e-07 59.7 108 38.0
Manes.01G211600 Manihot esculenta HOM05D000210 ORTHO05D005611 2.6e-07 59.3 78 43.6
SHI35779 Sapria himalayana HOM05D000210 ORTHO05D005611 5.8e-07 58.2 35 74.3
Os05g0143800 Oryza sativa ssp. japonica HOM05D000210 ORTHO05D005611 7.6e-07 57.8 97 34.0
SHI25125 Sapria himalayana HOM05D000210 ORTHO05D005611 1.3e-06 57.0 36 69.4


User provided reference genes

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