Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI48911 Sapria himalayana HOM05D000219 ORTHO05D368533 2.8e-48 194.9 93 100.0
SHI49308 Sapria himalayana HOM05D000219 ORTHO05D365202 2.8e-48 194.9 93 100.0
SHI50564 Sapria himalayana HOM05D000219 ORTHO05D010276 4.7e-40 167.5 86 91.9
SHI51309 Sapria himalayana HOM05D000219 ORTHO05D365638 4.7e-40 167.5 86 91.9
SHI47290 Sapria himalayana HOM05D000219 ORTHO05D364870 3.1e-39 164.9 86 90.7
SHI51482 Sapria himalayana HOM05D000219 ORTHO05D370418 7.8e-35 150.2 85 84.7
SHI50092 Sapria himalayana HOM05D000219 ORTHO05D010276 2.5e-25 118.6 60 90.0
SHI49809 Sapria himalayana HOM05D000219 ORTHO05D010276 5.6e-25 117.5 63 82.5
SHI50254 Sapria himalayana HOM05D000219 ORTHO05D010276 5.6e-25 117.5 63 82.5
SHI50990 Sapria himalayana HOM05D000219 ORTHO05D010276 1.2e-24 116.3 55 94.5
SHI50457 Sapria himalayana HOM05D000219 ORTHO05D010276 1.8e-23 112.5 55 94.5
SHI51293 Sapria himalayana HOM05D000219 ORTHO05D010276 3.1e-23 111.7 55 92.7
SHI49218 Sapria himalayana HOM05D000219 ORTHO05D370447 5.2e-23 110.9 55 90.9
SHI53422 Sapria himalayana HOM05D000219 ORTHO05D367697 6.6e-18 94.0 51 84.3
SHI53431 Sapria himalayana HOM05D000219 ORTHO05D366913 6.6e-18 94.0 51 84.3
SHI53731 Sapria himalayana HOM05D000219 ORTHO05D010276 8.6e-18 93.6 47 89.4
SHI39844 Sapria himalayana HOM05D000219 ORTHO05D010276 1.5e-17 92.8 51 80.4
SHI50011 Sapria himalayana HOM05D000219 ORTHO05D010276 2.5e-17 92.0 54 79.6
SHI50538 Sapria himalayana HOM05D000219 ORTHO05D010276 3.3e-17 91.7 57 71.9
SHI51431 Sapria himalayana HOM05D000219 ORTHO05D010276 5.6e-17 90.9 61 70.5
SHI53039 Sapria himalayana HOM05D000219 ORTHO05D368436 7.3e-17 90.5 51 82.4
SHI48873 Sapria himalayana HOM05D000219 ORTHO05D365863 1.2e-16 89.7 51 82.4
SHI50751 Sapria himalayana HOM05D000219 ORTHO05D010276 1.2e-16 89.7 54 75.9
SHI53988 Sapria himalayana HOM05D000219 ORTHO05D365004 2.1e-16 89.0 46 89.1
SHI50359 Sapria himalayana HOM05D000219 ORTHO05D010276 6.2e-16 87.4 51 80.4
SHI52092 Sapria himalayana HOM05D000219 ORTHO05D010276 6.2e-16 87.4 54 74.1
SHI50432 Sapria himalayana HOM05D000219 ORTHO05D010276 1.5e-14 82.8 43 86.0
SHI36796 Sapria himalayana HOM05D000219 ORTHO05D010276 2.6e-14 82.0 47 78.7
SHI51510 Sapria himalayana HOM05D000219 ORTHO05D370682 4.4e-14 81.3 48 72.9
Haze_18406 Corylus avellana HOM05D000219 ORTHO05D000226 5.6e-09 64.3 75 46.7
Potri.004G067000 Populus trichocarpa HOM05D000219 ORTHO05D000226 7.3e-09 63.9 50 58.0
CANSAT35G1028 Cannabis sativa HOM05D000219 ORTHO05D000226 1.3e-08 63.2 46 65.2
Sed0015203 Sechium edule HOM05D000219 ORTHO05D000226 1.3e-08 63.2 75 46.7
ClCG01G014590 Citrullus lanatus HOM05D000219 ORTHO05D000226 1.6e-08 62.8 75 46.7
Oeu062062.1 Olea europaea HOM05D000219 ORTHO05D000226 1.6e-08 62.8 75 45.3
QL08p055124 Quercus lobata HOM05D000219 ORTHO05D000226 1.6e-08 62.8 75 46.7
Prupe.5G245200 Prunus persica HOM05D000219 ORTHO05D000226 2.1e-08 62.4 75 42.7
Prupe.6G022900 Prunus persica HOM05D000219 ORTHO05D000226 2.1e-08 62.4 75 42.7
Carub.0006s2261 Capsella rubella HOM05D000219 ORTHO05D000226 2.8e-08 62.0 50 56.0
CsaV3_1G007740 Cucumis sativus L. HOM05D000219 ORTHO05D000226 2.8e-08 62.0 75 46.7
Hma1.2p1_0816F.1_g223010 Hydrangea macrophylla HOM05D000219 ORTHO05D000226 2.8e-08 62.0 75 45.3
Sp2g22670 Schrenkiella parvula HOM05D000219 ORTHO05D000226 2.8e-08 62.0 50 56.0
CiPaw.15G107700 Carya illinoinensis HOM05D000219 ORTHO05D000226 3.6e-08 61.6 50 58.0
FAN04G1983 Fragaria x ananassa HOM05D000219 ORTHO05D000226 3.6e-08 61.6 46 58.7
Nitab4.5_0010398g0010 Nicotiana tabacum HOM05D000219 ORTHO05D000226 3.6e-08 61.6 75 45.3
Sabra04G0044900 Salix brachista HOM05D000219 ORTHO05D000226 3.6e-08 61.6 50 56.0
TAR636G0341 Trochodendron aralioides HOM05D000219 ORTHO05D000226 3.6e-08 61.6 75 48.0
Migut.O00280 Erythranthe guttata HOM05D000219 ORTHO05D000226 4.8e-08 61.2 52 51.9
FvH4_5g18580 Fragaria vesca HOM05D000219 ORTHO05D000226 4.8e-08 61.2 46 58.7
FAN08G0809 Fragaria x ananassa HOM05D000219 ORTHO05D000226 4.8e-08 61.2 46 58.7
FAN18G2659 Fragaria x ananassa HOM05D000219 ORTHO05D000226 4.8e-08 61.2 46 58.7
Lj5A168T98 Lonicera japonica HOM05D000219 ORTHO05D000226 4.8e-08 61.2 75 45.3
Nitab4.5_0000477g0170 Nicotiana tabacum HOM05D000219 ORTHO05D000226 4.8e-08 61.2 75 45.3
THA.LOC104798999 Tarenaya hassleriana HOM05D000219 ORTHO05D000226 4.8e-08 61.2 50 54.0
MELO3C002189.2 Cucumis melo HOM05D000219 ORTHO05D000226 6.2e-08 60.8 75 45.3
DCAR_023241 Daucus carota HOM05D000219 ORTHO05D000226 6.2e-08 60.8 75 46.7
PSO063G5970 Papaver somniferum HOM05D000219 ORTHO05D000226 6.2e-08 60.8 75 42.7
Actinidia35153 Actinidia chinensis HOM05D000219 ORTHO05D000226 8.1e-08 60.5 75 44.0
Aqoxy1G01067 Aquilegia oxysepala HOM05D000219 ORTHO05D000226 8.1e-08 60.5 50 52.0
AL6G36350 Arabidopsis lyrata HOM05D000219 ORTHO05D000226 8.1e-08 60.5 50 54.0
AT5G24760 Arabidopsis thaliana HOM05D000219 ORTHO05D000226 8.1e-08 60.5 50 54.0
arahy.Tifrunner.gnm1.ann1.B2MH1M Arachis hypogaea HOM05D000219 ORTHO05D000226 8.1e-08 60.5 75 42.7
arahy.Tifrunner.gnm1.ann1.P0W1U8 Arachis hypogaea HOM05D000219 ORTHO05D000226 8.1e-08 60.5 75 42.7
Lalb_Chr22g0354051 Lupinus albus HOM05D000219 ORTHO05D000226 8.1e-08 60.5 75 44.0
Manes.02G226001 Manihot esculenta HOM05D000219 ORTHO05D000226 8.1e-08 60.5 50 56.0
PSO782G1609 Papaver somniferum HOM05D000219 ORTHO05D000226 8.1e-08 60.5 75 42.7
SEGI_32341 Sequoiadendron giganteum HOM05D000219 ORTHO05D000226 8.1e-08 60.5 78 42.3
Cc00_g07970 Coffea canephora HOM05D000219 ORTHO05D000226 1.1e-07 60.1 75 45.3
Phvul.004G136700 Phaseolus vulgaris HOM05D000219 ORTHO05D000226 1.1e-07 60.1 75 44.0
Rhsim12G0137400 Rhododendron simsii HOM05D000219 ORTHO05D000226 1.1e-07 60.1 75 44.0
SHI52107 Sapria himalayana HOM05D000219 ORTHO05D010276 1.1e-07 60.1 29 89.7
SGA_v2.0_scaffold90G27735 Striga asiatica HOM05D000219 ORTHO05D000226 1.1e-07 60.1 52 51.9
VMungo0464G1361 Vigna mungo HOM05D000219 ORTHO05D000226 1.1e-07 60.1 75 44.0
Cpa.g.sc168.2 Carica papaya HOM05D000219 ORTHO05D000226 1.4e-07 59.7 50 54.0
SalBow5G1826 Salvia bowleyana HOM05D000219 ORTHO05D000226 1.4e-07 59.7 75 42.7
SHI44937 Sapria himalayana HOM05D000219 ORTHO05D010276 1.4e-07 59.7 28 89.3
SHI48257 Sapria himalayana HOM05D000219 ORTHO05D368589 1.4e-07 59.7 28 92.9
GSVIVG01024246001 Vitis vinifera HOM05D000219 ORTHO05D000226 1.4e-07 59.7 75 44.0
Atru.chr9.15 Acer truncatum HOM05D000219 ORTHO05D000226 1.8e-07 59.3 53 52.8
Ca_25280_v3 Cicer arietinum L. HOM05D000219 ORTHO05D000226 1.8e-07 59.3 75 44.0
BcaB07g29920 Brassica carinata HOM05D000219 ORTHO05D000226 2.4e-07 58.9 50 52.0
BcaB07g29921 Brassica carinata HOM05D000219 ORTHO05D000226 2.4e-07 58.9 50 52.0
BcaC03g17949 Brassica carinata HOM05D000219 ORTHO05D009306 2.4e-07 58.9 50 52.0
C02p60090 Brassica napus HOM05D000219 ORTHO05D009306 2.4e-07 58.9 50 52.0
BolC2t12063H Brassica oleracea HOM05D000219 ORTHO05D000226 2.4e-07 58.9 50 52.0
CARHR188730 Cardamine hirsuta HOM05D000219 ORTHO05D000226 2.4e-07 58.9 50 54.0
Ciclev10020629m.g Citrus clementina HOM05D000219 ORTHO05D000226 2.4e-07 58.9 46 56.5
Eucgr.K02331 Eucalyptus grandis HOM05D000219 ORTHO05D000226 2.4e-07 58.9 75 44.0
Gohir.D08G245900 Gossypium hirsutum HOM05D000219 ORTHO05D000226 2.4e-07 58.9 50 52.0
Gorai.004G262400 Gossypium raimondii HOM05D000219 ORTHO05D000226 2.4e-07 58.9 50 52.0
RcHm_v2.0_Chr7g0176931 Rosa chinensis HOM05D000219 ORTHO05D000226 2.4e-07 58.9 46 56.5
Dinv03509 Davidia involucrata HOM05D000219 ORTHO05D000226 3.1e-07 58.5 75 41.3
Duzib128G1276 Durio zibethinus HOM05D000219 ORTHO05D000226 3.1e-07 58.5 50 52.0
Gohir.A08G225500 Gossypium hirsutum HOM05D000219 ORTHO05D000226 3.1e-07 58.5 50 52.0
Lj2g0026377 Lotus japonicus HOM05D000219 ORTHO05D000226 3.1e-07 58.5 75 46.7
Solyc06g072160.3 Solanum lycopersicum HOM05D000219 ORTHO05D000226 3.1e-07 58.5 75 44.0
Sopen06g028460 Solanum pennellii HOM05D000219 ORTHO05D000226 3.1e-07 58.5 75 44.0
Aa31LG11G3990 Aethionema arabicum HOM05D000219 ORTHO05D000226 4.0e-07 58.2 50 52.0
A02p40120 Brassica napus HOM05D000219 ORTHO05D009306 4.0e-07 58.2 46 56.5
BraA02t08978Z Brassica rapa HOM05D000219 ORTHO05D000226 4.0e-07 58.2 46 56.5
CAN.G65.64 Capsicum annuum HOM05D000219 ORTHO05D000226 4.0e-07 58.2 75 44.0
Glyma.09G161600 Glycine max HOM05D000219 ORTHO05D000226 4.0e-07 58.2 75 42.7
MBI03_g13437_MAGBIO Magnolia biondii HOM05D000219 ORTHO05D000226 4.0e-07 58.2 52 48.1
Nn3g18548 Nelumbo nucifera HOM05D000219 ORTHO05D000226 4.0e-07 58.2 75 42.7
Peaxi162Scf00643g00536 Petunia axillaris HOM05D000219 ORTHO05D000226 4.0e-07 58.2 75 45.3
PGR044G1542 Punica granatum HOM05D000219 ORTHO05D000226 5.3e-07 57.8 50 52.0
MD06G1241000 Malus domestica HOM05D000219 ORTHO05D000226 6.9e-07 57.4 47 51.1
TWI36G1688 Tripterygium wilfordii HOM05D000219 ORTHO05D000226 6.9e-07 57.4 50 52.0
vmacro16403 Vaccinium macrocarpon HOM05D000219 ORTHO05D000226 6.9e-07 57.4 75 42.7
MD14G1246800 Malus domestica HOM05D000219 ORTHO05D000226 9.0e-07 57.0 50 50.0
Psat1g018280 Pisum sativum HOM05D000219 ORTHO05D000226 9.0e-07 57.0 75 42.7
Thecc.05G196900 Theobroma cacao HOM05D000219 ORTHO05D000226 1.2e-06 56.6 50 50.0
TPR.G26646 Trifolium pratense HOM05D000219 ORTHO05D000226 1.2e-06 56.6 46 52.2
TPR.G31358 Trifolium pratense HOM05D000219 ORTHO05D000226 1.2e-06 56.6 75 42.7
ATR0124G003 Amborella trichopoda HOM05D000219 ORTHO05D000226 2.0e-06 55.8 50 46.0
MBI03_g44526_MAGBIO Magnolia biondii HOM05D000219 ORTHO05D000226 2.0e-06 55.8 52 46.2
Ah.14g085840 Amaranthus hybridus HOM05D005380 ORTHO05D006601 2.6e-06 55.5 50 50.0
Thhalv10004400m.g Eutrema salsugineum HOM05D000219 ORTHO05D000226 2.6e-06 55.5 50 52.0
EL10Ac8g19435 Beta vulgaris HOM05D000219 ORTHO05D000226 3.4e-06 55.1 75 41.3
AUR62038562 Chenopodium quinoa HOM05D000219 ORTHO05D000226 3.4e-06 55.1 75 41.3
HanXRQChr12g0381231 Helianthus annuus HOM05D000219 ORTHO05D000226 3.4e-06 55.1 46 50.0
Sc10g0006240 Simmondsia chinensis HOM05D000219 ORTHO05D000226 3.4e-06 55.1 50 50.0
Zm00001eb185610 Zea mays HOM05D000219 ORTHO05D000226 3.4e-06 55.1 53 43.4
Medtr6g068930 Medicago truncatula HOM05D000219 ORTHO05D000226 4.4e-06 54.7 75 40.0
Os02g0637700 Oryza sativa ssp. japonica HOM05D000219 ORTHO05D000226 4.4e-06 54.7 50 46.0
Hund22362 Selenicereus undatus HOM05D000219 ORTHO05D000226 4.4e-06 54.7 75 40.0
HanXRQChr11g0330081 Helianthus annuus HOM05D000219 ORTHO05D000226 5.8e-06 54.3 79 35.4
HPP92_015003 Vanilla planifolia HOM05D000219 ORTHO05D000226 7.6e-06 53.9 75 40.0
TPR.G26628 Trifolium pratense HOM05D000219 ORTHO05D000226 9.9e-06 53.5 46 50.0


User provided reference genes

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