Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI49265 Sapria himalayana HOM05D009967 ORTHO05D009625 1.6e-52 209.1 103 100.0
SHI53162 Sapria himalayana HOM05D009967 ORTHO05D009625 2.4e-21 105.5 72 76.4
SHI53955 Sapria himalayana HOM05D009967 ORTHO05D009625 2.4e-21 105.5 72 76.4
SHI25104 Sapria himalayana HOM05D009506 ORTHO05D001573 8.7e-19 97.1 79 62.0
SHI51920 Sapria himalayana HOM05D009967 ORTHO05D009625 1.3e-17 93.2 60 75.0
SHI13687 Sapria himalayana HOM05D001595 ORTHO05D001573 8.1e-17 90.5 64 68.8
SHI35985 Sapria himalayana HOM05D009967 ORTHO05D009625 3.4e-15 85.1 48 79.2
SHI40429 Sapria himalayana HOM05D009967 ORTHO05D009625 1.3e-14 83.2 48 79.2
SHI16093 Sapria himalayana HOM05D001595 ORTHO05D001573 1.7e-14 82.8 70 60.0
SHI49456 Sapria himalayana HOM05D009967 ORTHO05D009625 3.8e-14 81.6 41 90.2
SHI41760 Sapria himalayana HOM05D009967 ORTHO05D009625 4.9e-14 81.3 45 80.0
SHI33577 Sapria himalayana HOM05D001595 ORTHO05D001573 6.4e-14 80.9 48 75.0
SHI38448 Sapria himalayana HOM05D009967 ORTHO05D009625 1.4e-13 79.7 45 80.0
SHI32434 Sapria himalayana HOM05D001595 ORTHO05D001573 4.2e-13 78.2 51 74.5
SHI29963 Sapria himalayana HOM05D009967 ORTHO05D009625 2.1e-12 75.9 46 73.9
SHI02936 Sapria himalayana HOM05D001595 ORTHO05D001573 2.3e-11 72.4 71 53.5
Cpa.g.sc49.105 Carica papaya HOM05D001595 ORTHO05D001573 1.9e-10 69.3 65 53.8
SHI54543 Sapria himalayana HOM05D001595 ORTHO05D001573 3.3e-10 68.6 40 77.5
Lj4P858T30 Lonicera japonica HOM05D001595 ORTHO05D001573 1.3e-09 66.6 68 52.9
Rhsim08G0004100 Rhododendron simsii HOM05D001595 ORTHO05D001573 1.3e-09 66.6 69 47.8
PGR044G0324 Punica granatum HOM05D001595 ORTHO05D001573 1.6e-09 66.2 66 48.5
SHI27289 Sapria himalayana HOM05D009967 ORTHO05D009625 1.6e-09 66.2 37 86.5
unitig_7.g29872 Utricularia gibba HOM05D001595 ORTHO05D001573 2.1e-09 65.9 51 60.8
unitig_748.g8664 Utricularia gibba HOM05D001595 ORTHO05D001573 2.1e-09 65.9 51 60.8
Atru.chr13.2075 Acer truncatum HOM05D001595 ORTHO05D001573 2.8e-09 65.5 53 56.6
Atru.chr8.1692 Acer truncatum HOM05D001595 ORTHO05D001573 2.8e-09 65.5 53 56.6
Glyma.20G168300 Glycine max HOM05D001595 ORTHO05D001573 2.8e-09 65.5 62 48.4
Cfa002804 Carpinus fangiana HOM05D001595 ORTHO05D001573 3.6e-09 65.1 66 53.0
DCAR_001403 Daucus carota HOM05D001595 ORTHO05D001573 3.6e-09 65.1 56 60.7
DCAR_001408 Daucus carota HOM05D001595 ORTHO05D001573 3.6e-09 65.1 76 50.0
SHI55189 Sapria himalayana HOM05D009506 ORTHO05D009625 4.8e-09 64.7 65 52.3
FvH4_2g18910 Fragaria vesca HOM05D001595 ORTHO05D001573 6.2e-09 64.3 69 43.5
FAN24G1415 Fragaria x ananassa HOM05D001595 ORTHO05D001573 6.2e-09 64.3 69 43.5
Ciclev10003810m.g Citrus clementina HOM05D001595 ORTHO05D001573 8.1e-09 63.9 62 50.0
MBI19_g47477_MAGBIO Magnolia biondii HOM05D001595 ORTHO05D001573 8.1e-09 63.9 47 66.0
SHI39482 Sapria himalayana HOM05D009506 ORTHO05D009625 8.1e-09 63.9 60 56.7
CANSAT25G0524 Cannabis sativa HOM05D001595 ORTHO05D001573 1.1e-08 63.5 68 50.0
Aqoxy5G02057 Aquilegia oxysepala HOM05D001595 ORTHO05D001573 1.4e-08 63.2 66 50.0
MBI19_g48071_MAGBIO Magnolia biondii HOM05D001595 ORTHO05D001573 1.8e-08 62.8 46 67.4
SHI55235 Sapria himalayana HOM05D001595 ORTHO05D001573 1.8e-08 62.8 40 72.5
Manes.17G065250 Manihot esculenta HOM05D001595 ORTHO05D001573 2.4e-08 62.4 49 53.1
RcHm_v2.0_Chr6g0284701 Rosa chinensis HOM05D001595 ORTHO05D001573 2.4e-08 62.4 69 43.5
Cc07_g16880 Coffea canephora HOM05D001595 ORTHO05D001573 3.1e-08 62.0 68 50.0
Nitab4.5_0001582g0120 Nicotiana tabacum HOM05D001595 ORTHO05D001573 3.1e-08 62.0 51 58.8
Atru.chr13.2076 Acer truncatum HOM05D001595 ORTHO05D001573 5.3e-08 61.2 49 53.1
Migut.L00051 Erythranthe guttata HOM05D001595 ORTHO05D001573 5.3e-08 61.2 52 53.8
FAN15G3491 Fragaria x ananassa HOM05D006276 ORTHO05D007724 5.3e-08 61.2 64 48.4
Lalb_Chr08g0239061 Lupinus albus HOM05D001595 ORTHO05D001573 5.3e-08 61.2 63 50.8
PGSC0003DMG400003995 Solanum tuberosum HOM05D001595 ORTHO05D001573 5.3e-08 61.2 66 48.5
THA.LOC104812034 Tarenaya hassleriana HOM05D001595 ORTHO05D001573 5.3e-08 61.2 48 54.2
THA.LOC109116006 Tarenaya hassleriana HOM05D001595 ORTHO05D001573 5.3e-08 61.2 48 54.2
FAN27G2524 Fragaria x ananassa HOM05D006276 ORTHO05D007724 6.9e-08 60.8 64 48.4
Glyma.06G199900 Glycine max HOM05D001595 ORTHO05D001573 9.0e-08 60.5 70 47.1
RcHm_v2.0_Chr6g0284691 Rosa chinensis HOM05D001595 ORTHO05D001573 9.0e-08 60.5 69 39.1
Duzib116G0136 Durio zibethinus HOM05D001595 ORTHO05D001573 1.2e-07 60.1 50 52.0
Oeu012712.1 Olea europaea HOM05D001595 ORTHO05D001573 1.2e-07 60.1 55 52.7
Prupe.8G034300 Prunus persica HOM05D001595 ORTHO05D001573 1.2e-07 60.1 70 40.0
SHI25706 Sapria himalayana HOM05D009506 ORTHO05D009625 1.2e-07 60.1 63 49.2
SHI34263 Sapria himalayana HOM05D009506 ORTHO05D364613 1.2e-07 60.1 94 40.4
CiPaw.16G010800 Carya illinoinensis HOM05D001595 ORTHO05D001573 1.5e-07 59.7 70 50.0
DCAR_027561 Daucus carota HOM05D000076 ORTHO05D001377 1.5e-07 59.7 54 57.4
Lj3g0006531 Lotus japonicus HOM05D001595 ORTHO05D001573 1.5e-07 59.7 69 44.9
Potri.003G191800 Populus trichocarpa HOM05D001595 ORTHO05D001573 1.5e-07 59.7 52 51.9
Potri.009G077000 Populus trichocarpa HOM05D001595 ORTHO05D001573 1.5e-07 59.7 60 50.0
SHI41451 Sapria himalayana HOM05D042112 ORTHO05D364734 1.5e-07 59.7 74 50.0
Lj2P580T14 Lonicera japonica HOM05D001595 ORTHO05D001573 2.0e-07 59.3 41 65.9
Lj2P586T19 Lonicera japonica HOM05D001595 ORTHO05D001573 2.0e-07 59.3 41 65.9
MBI18_g10388_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 2.0e-07 59.3 47 59.6
SHI51130 Sapria himalayana HOM05D009506 ORTHO05D009625 2.0e-07 59.3 51 58.8
Thecc.08G155000 Theobroma cacao HOM05D001595 ORTHO05D001573 2.0e-07 59.3 48 52.1
SHI23856 Sapria himalayana HOM05D009506 ORTHO05D369764 2.6e-07 58.9 92 42.4
Solyc11g005500.1 Solanum lycopersicum HOM05D001595 ORTHO05D001573 2.6e-07 58.9 66 48.5
TAR381G0734 Trochodendron aralioides HOM05D001595 ORTHO05D001573 2.6e-07 58.9 55 54.5
TAR381G0944 Trochodendron aralioides HOM05D001595 ORTHO05D001573 2.6e-07 58.9 55 54.5
QL10p018395 Quercus lobata HOM05D001595 ORTHO05D001573 3.4e-07 58.5 53 56.6
TWI60G0213 Tripterygium wilfordii HOM05D001595 ORTHO05D001573 3.4e-07 58.5 51 56.9
SHI30967 Sapria himalayana HOM05D000024 ORTHO05D000007 4.5e-07 58.2 54 57.4
Lj5g0011167 Lotus japonicus HOM05D001595 ORTHO05D001573 5.8e-07 57.8 59 47.5
Phvul.003G272700 Phaseolus vulgaris HOM05D001595 ORTHO05D001573 5.8e-07 57.8 49 51.0
QL10p018379 Quercus lobata HOM05D001595 ORTHO05D001573 5.8e-07 57.8 53 56.6
AL2G36900 Arabidopsis lyrata HOM05D001595 ORTHO05D001573 7.6e-07 57.4 49 49.0
AT1G76750 Arabidopsis thaliana HOM05D001595 ORTHO05D001573 7.6e-07 57.4 49 49.0
Duzib235G1226 Durio zibethinus HOM05D001595 ORTHO05D001573 7.6e-07 57.4 47 51.1
FAN15G0384 Fragaria x ananassa HOM05D001595 ORTHO05D001573 7.6e-07 57.4 70 38.6
FAN27G3279 Fragaria x ananassa HOM05D001595 ORTHO05D001573 7.6e-07 57.4 69 39.1
Glyma.04G164700 Glycine max HOM05D001595 ORTHO05D001573 7.6e-07 57.4 67 43.3
SHI35414 Sapria himalayana HOM05D009506 ORTHO05D009625 7.6e-07 57.4 57 52.6
Sed0014305 Sechium edule HOM05D001595 ORTHO05D001573 7.6e-07 57.4 68 39.7
VMungo0251G0665 Vigna mungo HOM05D001595 ORTHO05D001573 7.6e-07 57.4 49 53.1
BcaB02g07075 Brassica carinata HOM05D001595 ORTHO05D001573 9.9e-07 57.0 49 46.9
BcaB05g25008 Brassica carinata HOM05D001595 ORTHO05D001573 9.9e-07 57.0 49 46.9
BcaB05g25009 Brassica carinata HOM05D005242 ORTHO05D006778 9.9e-07 57.0 49 46.9
BcaC03g15699 Brassica carinata HOM05D001595 ORTHO05D001573 9.9e-07 57.0 49 46.9
BcaC08g45511 Brassica carinata HOM05D001595 ORTHO05D001573 9.9e-07 57.0 49 46.9
A02p20870 Brassica napus HOM05D001595 ORTHO05D001573 9.9e-07 57.0 49 46.9
A07p28370 Brassica napus HOM05D001595 ORTHO05D001573 9.9e-07 57.0 49 46.9
C02p32800 Brassica napus HOM05D001595 ORTHO05D001573 9.9e-07 57.0 49 46.9
C06p31810 Brassica napus HOM05D001595 ORTHO05D001573 9.9e-07 57.0 49 46.9
BolC2t09419H Brassica oleracea HOM05D001595 ORTHO05D001573 9.9e-07 57.0 49 46.9
BolC6t38309H Brassica oleracea HOM05D001595 ORTHO05D001573 9.9e-07 57.0 49 46.9
BraA07t30473Z Brassica rapa HOM05D001595 ORTHO05D001573 9.9e-07 57.0 49 46.9
FvH4_2g18700 Fragaria vesca HOM05D001595 ORTHO05D001573 9.9e-07 57.0 65 41.5
FvH4_2g18870 Fragaria vesca HOM05D001595 ORTHO05D001573 9.9e-07 57.0 65 41.5
FAN15G0477 Fragaria x ananassa HOM05D001595 ORTHO05D001573 9.9e-07 57.0 65 41.5
FAN24G2361 Fragaria x ananassa HOM05D001595 ORTHO05D001573 9.9e-07 57.0 65 41.5
Glyma.09G195200 Glycine max HOM05D001595 ORTHO05D001573 9.9e-07 57.0 62 46.8
Prupe.8G034800 Prunus persica HOM05D001595 ORTHO05D001573 9.9e-07 57.0 52 44.2
SHI38062 Sapria himalayana HOM05D004909 ORTHO05D009625 9.9e-07 57.0 38 73.7
SHI39922 Sapria himalayana HOM05D009506 ORTHO05D009625 9.9e-07 57.0 60 51.7
Sed0013155 Sechium edule HOM05D001595 ORTHO05D001573 9.9e-07 57.0 68 39.7
BcaB02g07121 Brassica carinata HOM05D001595 ORTHO05D001573 1.3e-06 56.6 49 46.9
CARHR070290 Cardamine hirsuta HOM05D001595 ORTHO05D001573 1.7e-06 56.2 49 44.9
Thhalv10019517m.g Eutrema salsugineum HOM05D001595 ORTHO05D001573 1.7e-06 56.2 49 46.9
FAN04G2420 Fragaria x ananassa HOM05D001595 ORTHO05D001573 1.7e-06 56.2 47 48.9
MD10G1029400 Malus domestica HOM05D001595 ORTHO05D001573 1.7e-06 56.2 52 42.3
Nn1g06066 Nelumbo nucifera HOM05D001595 ORTHO05D001573 1.7e-06 56.2 50 52.0
Nitab4.5_0002138g0050 Nicotiana tabacum HOM05D001595 ORTHO05D001573 1.7e-06 56.2 40 62.5
SHI42964 Sapria himalayana HOM05D009506 ORTHO05D009625 1.7e-06 56.2 43 60.5
Sp5g31900 Schrenkiella parvula HOM05D001595 ORTHO05D001573 1.7e-06 56.2 49 44.9
BraA02t07118Z Brassica rapa HOM05D001595 ORTHO05D001573 2.2e-06 55.8 49 44.9
Prupe.8G031900 Prunus persica HOM05D001595 ORTHO05D001573 2.2e-06 55.8 70 38.6
Prupe.8G032300 Prunus persica HOM05D001595 ORTHO05D001573 2.2e-06 55.8 70 38.6
Prupe.I003300 Prunus persica HOM05D001595 ORTHO05D001573 2.2e-06 55.8 55 41.8
SHI43987 Sapria himalayana HOM05D004909 ORTHO05D009625 2.2e-06 55.8 38 78.9
Aa31LG4G6820 Aethionema arabicum HOM05D001595 ORTHO05D001573 2.9e-06 55.5 73 38.4
Carub.0002s2366 Capsella rubella HOM05D001595 ORTHO05D001573 2.9e-06 55.5 68 41.2
Dinv25879 Davidia involucrata HOM05D001595 ORTHO05D001573 2.9e-06 55.5 68 42.6
FAN27G1121 Fragaria x ananassa HOM05D001595 ORTHO05D001573 2.9e-06 55.5 65 40.0
Sabra18G0027400 Salix brachista HOM05D001595 ORTHO05D001573 2.9e-06 55.5 52 46.2
SHI23611 Sapria himalayana HOM05D009506 ORTHO05D009625 2.9e-06 55.5 57 50.9
SHI29964 Sapria himalayana HOM05D004909 ORTHO05D009625 2.9e-06 55.5 28 92.9
SHI35990 Sapria himalayana HOM05D009506 ORTHO05D009625 2.9e-06 55.5 41 63.4
CiPaw.04G087400 Carya illinoinensis HOM05D001595 ORTHO05D001573 3.8e-06 55.1 60 43.3
SHI46715 Sapria himalayana HOM05D004909 ORTHO05D009625 3.8e-06 55.1 27 96.3
SHI49389 Sapria himalayana HOM05D004909 ORTHO05D009625 3.8e-06 55.1 29 86.2
SHI49457 Sapria himalayana HOM05D004909 ORTHO05D009625 3.8e-06 55.1 27 96.3
EL10Ac2g03979 Beta vulgaris HOM05D001595 ORTHO05D001573 4.9e-06 54.7 52 44.2
COL.COLO4_29870 Corchorus olitorius HOM05D001595 ORTHO05D001573 4.9e-06 54.7 50 44.0
Migut.C00167 Erythranthe guttata HOM05D001595 ORTHO05D001573 4.9e-06 54.7 60 48.3
Migut.C00168 Erythranthe guttata HOM05D001595 ORTHO05D001573 4.9e-06 54.7 60 48.3
Sabra03G0021300 Salix brachista HOM05D001595 ORTHO05D001573 4.9e-06 54.7 52 46.2
SHI37305 Sapria himalayana HOM05D009506 ORTHO05D009625 4.9e-06 54.7 54 53.7
arahy.Tifrunner.gnm1.ann1.D1YDE1 Arachis hypogaea HOM05D001595 ORTHO05D001573 6.4e-06 54.3 40 55.0
FvH4_2g13390 Fragaria vesca HOM05D001595 ORTHO05D001573 6.4e-06 54.3 57 45.6
FvH4_2g13400 Fragaria vesca HOM05D001595 ORTHO05D001573 6.4e-06 54.3 57 45.6
Gohir.A05G270700 Gossypium hirsutum HOM05D001595 ORTHO05D001573 6.4e-06 54.3 49 51.0
Gorai.009G285800 Gossypium raimondii HOM05D001595 ORTHO05D001573 6.4e-06 54.3 49 51.0
Sabra09G0058800 Salix brachista HOM05D001595 ORTHO05D001573 6.4e-06 54.3 49 49.0
TAR628G0448 Trochodendron aralioides HOM05D001595 ORTHO05D001573 6.4e-06 54.3 39 64.1
Haze_17775 Corylus avellana HOM05D001595 ORTHO05D001573 8.4e-06 53.9 33 63.6
FAN15G2959 Fragaria x ananassa HOM05D001595 ORTHO05D001573 8.4e-06 53.9 57 43.9
FAN20G0442 Fragaria x ananassa HOM05D001595 ORTHO05D001573 8.4e-06 53.9 57 43.9
Os03g0296600 Oryza sativa ssp. japonica HOM05D001595 ORTHO05D001573 8.4e-06 53.9 40 57.5
PSO017G6837 Papaver somniferum HOM05D001595 ORTHO05D001573 8.4e-06 53.9 53 47.2
PSO063G4001 Papaver somniferum HOM05D001595 ORTHO05D001573 8.4e-06 53.9 53 47.2
Rhsim10G0143700 Rhododendron simsii HOM05D001595 ORTHO05D001573 8.4e-06 53.9 38 60.5
SHI52607 Sapria himalayana HOM05D009506 ORTHO05D009625 8.4e-06 53.9 57 50.9


User provided reference genes

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