Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI49196 Sapria himalayana HOM05D001560 ORTHO05D004675 3.5e-163 578.2 279 100.0
SHI37085 Sapria himalayana HOM05D001560 ORTHO05D004675 8.4e-125 450.7 318 73.6
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 8.4e-109 397.5 333 65.2
SHI36971 Sapria himalayana HOM05D001560 ORTHO05D004675 5.1e-106 388.3 258 77.5
SHI36583 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-98 363.6 363 57.3
SHI51143 Sapria himalayana HOM05D001560 ORTHO05D004675 5.1e-98 361.7 281 69.0
SHI33931 Sapria himalayana HOM05D001560 ORTHO05D004675 9.0e-95 350.9 257 72.8
SHI35231 Sapria himalayana HOM05D001560 ORTHO05D004675 5.8e-94 348.2 336 58.9
SHI36380 Sapria himalayana HOM05D001560 ORTHO05D004675 3.8e-93 345.5 284 65.8
SHI43258 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-90 336.7 168 95.8
SHI36016 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-82 310.5 163 90.2
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 3.3e-81 305.8 367 51.2
SHI54579 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-74 283.5 136 98.5
SHI48979 Sapria himalayana HOM05D001560 ORTHO05D004675 4.1e-71 272.3 137 94.2
SHI45393 Sapria himalayana HOM05D001560 ORTHO05D004675 9.1e-71 271.2 221 65.6
Aa31csc239G40 Aethionema arabicum HOM05D001560 ORTHO05D004675 2.0e-70 270.0 135 94.8
BolSC28t60362H Brassica oleracea HOM05D001560 ORTHO05D004675 2.0e-70 270.0 135 94.8
BraSC48t46349Z Brassica rapa HOM05D001560 ORTHO05D004675 2.0e-70 270.0 135 94.8
Thhalv10022839m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 2.0e-70 270.0 135 94.8
Sp3g25870 Schrenkiella parvula HOM05D001560 ORTHO05D004675 2.0e-70 270.0 135 94.8
ATMG00070 Arabidopsis thaliana HOM05D001560 ORTHO05D004675 4.5e-70 268.9 135 94.1
CARHR282620 Cardamine hirsuta HOM05D001560 ORTHO05D004675 4.5e-70 268.9 135 94.1
SHI35188 Sapria himalayana HOM05D001560 ORTHO05D004675 4.5e-70 268.9 329 51.1
BcaC09g49590 Brassica carinata HOM05D001560 ORTHO05D004675 1.0e-69 267.7 135 94.1
CsaV3_UNG210330 Cucumis sativus L. HOM05D001560 ORTHO05D004675 1.7e-69 266.9 135 94.1
ECA039G0015 Erigeron canadensis HOM05D001560 ORTHO05D004675 2.2e-69 266.5 135 94.1
ECA039G0026 Erigeron canadensis HOM05D001560 ORTHO05D004675 2.2e-69 266.5 135 94.1
Gohir.A01G022400 Gossypium hirsutum HOM05D001560 ORTHO05D004675 2.9e-69 266.2 135 93.3
BcaC09g49591 Brassica carinata HOM05D001560 ORTHO05D004675 3.8e-69 265.8 135 93.3
LjContig00439g0006307 Lotus japonicus HOM05D001560 ORTHO05D004675 8.5e-69 264.6 135 93.3
LjContig00446g0014136 Lotus japonicus HOM05D001560 ORTHO05D004675 8.5e-69 264.6 135 93.3
Lalb_Chr00c39g0409121 Lupinus albus HOM05D001560 ORTHO05D004675 8.5e-69 264.6 135 93.3
Lalb_Chr00c39g0409261 Lupinus albus HOM05D001560 ORTHO05D004675 8.5e-69 264.6 135 93.3
Lalb_Chr00c51g0413181 Lupinus albus HOM05D001560 ORTHO05D004675 8.5e-69 264.6 135 93.3
RhsimMtG0004600 Rhododendron simsii HOM05D001560 ORTHO05D004675 8.5e-69 264.6 135 93.3
RhsimMtG0006100 Rhododendron simsii HOM05D001560 ORTHO05D004675 8.5e-69 264.6 135 93.3
Actinidia34872 Actinidia chinensis HOM05D001560 ORTHO05D004675 1.1e-68 264.2 135 93.3
Thhalv10002997m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 1.1e-68 264.2 135 93.3
SalBow1G1852 Salvia bowleyana HOM05D001560 ORTHO05D004675 1.1e-68 264.2 135 92.6
HanXRQChr00c0055g0571471 Helianthus annuus HOM05D001560 ORTHO05D004675 1.9e-68 263.5 135 93.3
HanXRQChr12g0358671 Helianthus annuus HOM05D001560 ORTHO05D004675 1.9e-68 263.5 135 93.3
HanXRQMTg0579651 Helianthus annuus HOM05D001560 ORTHO05D004675 1.9e-68 263.5 135 93.3
Lj2P1224T99 Lonicera japonica HOM05D001560 ORTHO05D004675 1.9e-68 263.5 135 93.3
Lj2P1227T100 Lonicera japonica HOM05D001560 ORTHO05D004675 1.9e-68 263.5 135 93.3
SGA_v2.0_scaffold245G44645 Striga asiatica HOM05D001560 ORTHO05D004675 1.9e-68 263.5 135 92.6
CANSAT16G0009 Cannabis sativa HOM05D001560 ORTHO05D004675 2.5e-68 263.1 135 93.3
Potri.013G066660 Populus trichocarpa HOM05D001560 ORTHO05D004675 3.2e-68 262.7 135 91.9
CAN.G223.15 Capsicum annuum HOM05D001560 ORTHO05D004675 4.2e-68 262.3 135 92.6
Dinv06677 Davidia involucrata HOM05D001560 ORTHO05D004675 4.2e-68 262.3 137 91.2
arahy.Tifrunner.gnm1.ann1.HAH5KR Arachis hypogaea HOM05D001560 ORTHO05D004675 7.2e-68 261.5 135 91.9
Sed0020323 Sechium edule HOM05D001560 ORTHO05D004675 7.2e-68 261.5 135 91.9
DCAR_031657 Daucus carota HOM05D001560 ORTHO05D004675 1.2e-67 260.8 135 92.6
DCAR_032439 Daucus carota HOM05D001560 ORTHO05D004675 1.2e-67 260.8 135 92.6
SabraMtG0007900 Salix brachista HOM05D001560 ORTHO05D004675 1.2e-67 260.8 135 91.9
unitig_87.g28016 Utricularia gibba HOM05D001560 ORTHO05D004675 1.2e-67 260.8 135 92.6
Solyc00g019950.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 2.1e-67 260.0 135 91.9
Ah.02g118870 Amaranthus hybridus HOM05D001560 ORTHO05D004675 2.7e-67 259.6 136 90.4
Ah.10g027950 Amaranthus hybridus HOM05D001560 ORTHO05D004675 2.7e-67 259.6 136 90.4
RcHm_v2.0_Chr6g0257991 Rosa chinensis HOM05D001560 ORTHO05D004675 3.6e-67 259.2 135 91.9
RcHm_v2.0_MTg0498881 Rosa chinensis HOM05D001560 ORTHO05D004675 3.6e-67 259.2 135 91.9
ECA238G3729 Erigeron canadensis HOM05D001560 ORTHO05D004675 6.1e-67 258.5 132 92.4
DCAR_032222 Daucus carota HOM05D001560 ORTHO05D004675 7.9e-67 258.1 135 91.9
Medtr0212s0080 Medicago truncatula HOM05D001560 ORTHO05D004675 7.9e-67 258.1 133 91.7
Psat7g198960 Pisum sativum HOM05D001560 ORTHO05D004675 7.9e-67 258.1 133 91.7
SHI35320 Sapria himalayana HOM05D001560 ORTHO05D004675 1.4e-66 257.3 136 89.7
SHI37162 Sapria himalayana HOM05D001560 ORTHO05D004675 1.4e-66 257.3 134 92.5
Migut.D01524 Erythranthe guttata HOM05D001560 ORTHO05D004675 1.8e-66 256.9 135 91.1
MBI05_g23323_MAGBIO Magnolia biondii HOM05D001560 ORTHO05D004675 2.0e-65 253.4 135 90.4
HanXRQChr02g0035261 Helianthus annuus HOM05D001560 ORTHO05D004675 3.3e-65 252.7 135 90.4
SHI53284 Sapria himalayana HOM05D001560 ORTHO05D004675 3.3e-65 252.7 136 89.7
Ah.08g210720 Amaranthus hybridus HOM05D001560 ORTHO05D004675 7.4e-65 251.5 136 89.0
Nn1g10115 Nelumbo nucifera HOM05D001560 ORTHO05D004675 9.7e-65 251.1 135 90.4
Zm00001eb382940 Zea mays HOM05D001560 ORTHO05D004675 8.2e-64 248.1 135 88.1
CDE02G0735 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 2.4e-63 246.5 135 88.1
Cpa.g.sc38.8 Carica papaya HOM05D001560 ORTHO05D004675 3.1e-63 246.1 143 83.2
Ah.10g028660 Amaranthus hybridus HOM05D001560 ORTHO05D004675 9.1e-63 244.6 128 91.4
SHI53856 Sapria himalayana HOM05D001560 ORTHO05D004675 1.0e-61 241.1 136 88.2
SHI37161 Sapria himalayana HOM05D000743 ORTHO05D000580 1.5e-60 237.3 135 85.2
Lalb_Chr00c21g0406161 Lupinus albus HOM05D001560 ORTHO05D004675 1.6e-59 233.8 118 94.1
SHI39097 Sapria himalayana HOM05D001560 ORTHO05D004675 5.2e-58 228.8 216 60.6
SHI36269 Sapria himalayana HOM05D001560 ORTHO05D004675 1.5e-57 227.3 232 55.6
CsaV3_5G015950 Cucumis sativus L. HOM05D001560 ORTHO05D004675 3.3e-57 226.1 127 87.4
SHI51556 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-56 224.2 113 94.7
Gorai.001G166700 Gossypium raimondii HOM05D007877 ORTHO05D009957 8.2e-56 221.5 112 93.8
SHI46062 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-55 220.3 112 93.8
Lsat_1_v5_gn_1_23980 Lactuca sativa HOM05D001560 ORTHO05D004675 5.3e-55 218.8 121 87.6
SHI40934 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-54 217.2 114 91.2
Hma1.2p1_1099F.1_g256790 Hydrangea macrophylla HOM05D001560 ORTHO05D004675 1.0e-53 214.5 112 92.0
BolSC28t60305H Brassica oleracea HOM05D001560 ORTHO05D004675 2.9e-53 213.0 132 78.8
SHI52730 Sapria himalayana HOM05D001560 ORTHO05D004675 3.8e-53 212.6 110 90.9
SHI47572 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-52 211.1 137 75.2
Peaxi162Scf01588g00002 Petunia axillaris HOM05D001560 ORTHO05D004675 1.9e-52 210.3 135 76.3
SHI42241 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-50 203.8 112 89.3
Sopen00g002540 Solanum pennellii HOM05D001560 ORTHO05D004675 2.6e-49 199.9 102 93.1
ECA041G0003 Erigeron canadensis HOM05D001560 ORTHO05D004675 4.4e-49 199.1 106 89.6
SHI35332 Sapria himalayana HOM05D001560 ORTHO05D004675 5.7e-49 198.7 99 92.9
SHI36139 Sapria himalayana HOM05D001560 ORTHO05D004675 5.7e-49 198.7 242 50.8
CARHR287160 Cardamine hirsuta HOM05D001560 ORTHO05D004675 9.8e-49 198.0 96 95.8
arahy.Tifrunner.gnm1.ann1.11DKXG Arachis hypogaea HOM05D001560 ORTHO05D004675 6.3e-48 195.3 97 93.8
BolC1t03442H Brassica oleracea HOM05D001560 ORTHO05D004675 6.3e-48 195.3 150 68.7
arahy.Tifrunner.gnm1.ann1.E4X7TI Arachis hypogaea HOM05D001560 ORTHO05D004675 1.4e-47 194.1 99 92.9
Ca_22175_v3 Cicer arietinum L. HOM05D001560 ORTHO05D004675 1.4e-47 194.1 96 94.8
Dinv29327 Davidia involucrata HOM05D001560 ORTHO05D004675 9.1e-47 191.4 96 93.8
C01p34750 Brassica napus HOM05D001560 ORTHO05D004675 2.0e-46 190.3 150 68.0
CDE02G2746 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 1.0e-45 188.0 102 88.2
SHI26652 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-45 187.6 97 91.8
SHI36570 Sapria himalayana HOM05D001560 ORTHO05D004675 3.8e-45 186.0 167 62.3
Haze_26224 Corylus avellana HOM05D001560 ORTHO05D004675 1.9e-44 183.7 134 61.2
HanXRQChr10g0297171 Helianthus annuus HOM05D001560 ORTHO05D004675 9.5e-44 181.4 136 72.1
Cre07.g327400 Chlamydomonas reinhardtii HOM05D001560 ORTHO05D004675 8.0e-43 178.3 133 60.9
SHI50434 Sapria himalayana HOM05D001560 ORTHO05D004675 8.8e-42 174.9 109 80.7
PGSC0003DMG400018984 Solanum tuberosum HOM05D001560 ORTHO05D004675 9.8e-41 171.4 96 85.4
SHI39080 Sapria himalayana HOM05D001560 ORTHO05D004675 6.3e-40 168.7 103 82.5
Os12g0422971 Oryza sativa ssp. japonica HOM05D001560 ORTHO05D004675 4.1e-39 166.0 87 90.8
SHI36775 Sapria himalayana HOM05D001560 ORTHO05D004675 5.4e-39 165.6 84 90.5
SHI36786 Sapria himalayana HOM05D001560 ORTHO05D004675 5.4e-39 165.6 84 90.5
TPR.G40193 Trifolium pratense HOM05D001560 ORTHO05D004675 4.5e-38 162.5 79 93.7
Nitab4.5_0001152g0360 Nicotiana tabacum HOM05D001560 ORTHO05D004675 3.0e-34 149.8 81 86.4
SHI49835 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-33 147.9 166 54.2
SHI50380 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-33 147.9 166 54.2
SHI36375 Sapria himalayana HOM05D001560 ORTHO05D004675 1.5e-33 147.5 71 95.8
SHI35288 Sapria himalayana HOM05D001560 ORTHO05D004675 3.4e-33 146.4 223 43.9
SHI38033 Sapria himalayana HOM05D001560 ORTHO05D004675 3.4e-33 146.4 71 95.8
SHI36939 Sapria himalayana HOM05D001560 ORTHO05D004675 4.4e-33 146.0 71 95.8
SHI40902 Sapria himalayana HOM05D001560 ORTHO05D004675 4.4e-33 146.0 71 94.4
SHI36081 Sapria himalayana HOM05D001560 ORTHO05D004675 5.7e-33 145.6 71 94.4
SHI39123 Sapria himalayana HOM05D001560 ORTHO05D004675 5.7e-33 145.6 71 94.4
Manes.01G049495 Manihot esculenta HOM05D001560 ORTHO05D004675 1.3e-32 144.4 74 89.2
SHI34635 Sapria himalayana HOM05D001560 ORTHO05D004675 3.7e-32 142.9 71 93.0
SHI36627 Sapria himalayana HOM05D001560 ORTHO05D004675 6.4e-32 142.1 67 97.0
SHI43451 Sapria himalayana HOM05D001560 ORTHO05D004675 8.3e-32 141.7 71 93.0
Solyc03g061560.3 Solanum lycopersicum HOM05D001560 ORTHO05D004675 1.8e-31 140.6 121 62.0
SHI27346 Sapria himalayana HOM05D001560 ORTHO05D004675 2.4e-31 140.2 71 93.0
CAN.G134.23 Capsicum annuum HOM05D001560 ORTHO05D004675 3.2e-31 139.8 71 91.5
Gohir.A03G134200 Gossypium hirsutum HOM05D001560 ORTHO05D004675 3.2e-31 139.8 71 91.5
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 3.2e-31 139.8 112 66.1
SHI38213 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-30 137.5 71 91.5
Zm00001eb436070 Zea mays HOM05D001560 ORTHO05D004675 2.0e-30 137.1 71 90.1
Zm00001eb440310 Zea mays HOM05D001560 ORTHO05D004675 2.0e-30 137.1 71 90.1
Zm00001eb440380 Zea mays HOM05D001560 ORTHO05D004675 2.0e-30 137.1 71 90.1
Zm00001eb442180 Zea mays HOM05D001560 ORTHO05D004675 2.0e-30 137.1 71 90.1
AUR62042344 Chenopodium quinoa HOM05D001560 ORTHO05D004675 2.7e-30 136.7 71 88.7
SHI34631 Sapria himalayana HOM05D001560 ORTHO05D004675 3.5e-30 136.3 71 91.5
SHI38099 Sapria himalayana HOM05D001560 ORTHO05D004675 6.6e-29 132.1 71 88.7
Solyc08g065620.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 1.9e-28 130.6 69 88.4
Nitab4.5_0013170g0020 Nicotiana tabacum HOM05D001560 ORTHO05D004675 2.5e-28 130.2 71 85.9
SMO053G0006 Selaginella moellendorffii HOM05D001560 ORTHO05D004675 1.2e-27 127.9 134 48.5
Nitab4.5_0001127g0220 Nicotiana tabacum HOM05D001560 ORTHO05D004675 8.0e-27 125.2 71 81.7
BraSC177t45760Z Brassica rapa HOM05D001560 ORTHO05D004675 3.1e-26 123.2 83 74.7
TPR.G15690 Trifolium pratense HOM05D001560 ORTHO05D004675 3.1e-26 123.2 64 90.6
SHI33106 Sapria himalayana HOM05D000743 ORTHO05D000580 4.0e-26 122.9 77 77.9
Nitab4.5_0001152g0390 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.7e-24 117.5 67 80.6
BraSC48t46227Z Brassica rapa HOM05D001560 ORTHO05D004675 9.2e-23 111.7 80 73.8
SHI37068 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-22 110.9 136 48.5
Sc13g0007750 Simmondsia chinensis HOM05D001560 ORTHO05D004675 1.6e-19 100.9 135 46.7
Solyc08g029250.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 2.1e-19 100.5 82 63.4
Nitab4.5_0000661g0100 Nicotiana tabacum HOM05D001560 ORTHO05D004675 3.6e-19 99.8 60 78.3
SHI44216 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-18 97.4 69 71.0
SHI35323 Sapria himalayana HOM05D001560 ORTHO05D004675 6.8e-18 95.5 55 83.6
Prupe.2G039100 Prunus persica HOM05D001560 ORTHO05D004675 1.2e-17 94.7 56 83.9
Solyc01g020470.3 Solanum lycopersicum HOM05D001560 ORTHO05D004675 4.4e-17 92.8 60 73.3
SHI54988 Sapria himalayana HOM05D001560 ORTHO05D004675 4.9e-16 89.4 44 95.5
SHI34998 Sapria himalayana HOM05D001560 ORTHO05D003613 6.4e-16 89.0 54 83.3
CsaV3_5G015880 Cucumis sativus L. HOM05D001560 ORTHO05D004675 1.9e-15 87.4 52 76.9
SHI38481 Sapria himalayana HOM05D001560 ORTHO05D004675 3.9e-13 79.7 100 51.0
Nitab4.5_0019346g0010 Nicotiana tabacum HOM05D001560 ORTHO05D004675 2.5e-12 77.0 42 85.7
Nitab4.5_0001152g0580 Nicotiana tabacum HOM05D001560 ORTHO05D004675 9.5e-12 75.1 50 70.0
SHI33107 Sapria himalayana HOM05D001560 ORTHO05D004675 2.1e-11 73.9 48 75.0
SHI37900 Sapria himalayana HOM05D001560 ORTHO05D003613 6.8e-10 68.9 30 96.7
TPR.G20383 Trifolium pratense HOM05D001560 ORTHO05D004675 1.7e-08 64.3 33 87.9
Nitab4.5_0003709g0080 Nicotiana tabacum HOM05D012582 ORTHO05D011721 4.9e-08 62.8 30 93.3
DCAR_022732 Daucus carota HOM05D001560 ORTHO05D004675 6.4e-08 62.4 30 90.0
SHI38463 Sapria himalayana HOM05D001560 ORTHO05D003613 2.4e-07 60.5 25 100.0
EL10Ac7g17432 Beta vulgaris HOM05D001560 ORTHO05D004675 9.2e-07 58.5 37 73.0
PGSC0003DMG400020882 Solanum tuberosum HOM05D001560 ORTHO05D004675 2.7e-06 57.0 45 64.4
SHI42054 Sapria himalayana HOM05D001560 ORTHO05D004675 6.0e-06 55.8 27 92.6


User provided reference genes

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