Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI49167 Sapria himalayana HOM05D004507 ORTHO05D004874 7.1e-140 500.7 281 100.0
SHI24757 Sapria himalayana HOM05D004507 ORTHO05D004874 6.0e-38 162.2 105 78.1
Duzib150G1659 Durio zibethinus HOM05D004507 ORTHO05D004874 5.4e-23 112.5 184 39.7
Potri.018G099100 Populus trichocarpa HOM05D004507 ORTHO05D004874 7.1e-23 112.1 184 41.3
Manes.14G147700 Manihot esculenta HOM05D004507 ORTHO05D004874 2.1e-22 110.5 175 42.3
Sabra06G0135200 Salix brachista HOM05D004507 ORTHO05D004874 2.1e-22 110.5 185 39.5
Dinv42787 Davidia involucrata HOM05D004507 ORTHO05D004874 4.6e-22 109.4 178 39.3
Dinv43314 Davidia involucrata HOM05D004507 ORTHO05D004874 4.6e-22 109.4 178 39.3
Duzib168G0769 Durio zibethinus HOM05D004507 ORTHO05D004874 4.6e-22 109.4 186 36.6
Thecc.09G160500 Theobroma cacao HOM05D004507 ORTHO05D004874 4.6e-22 109.4 185 38.4
Potri.006G177000 Populus trichocarpa HOM05D004507 ORTHO05D004874 6.0e-22 109.0 177 41.2
Duzib187G0534 Durio zibethinus HOM05D004507 ORTHO05D004874 7.8e-22 108.6 185 40.0
Cpa.g.sc75.20 Carica papaya HOM05D004507 ORTHO05D004874 1.0e-21 108.2 182 39.0
Nn8g40236 Nelumbo nucifera HOM05D004507 ORTHO05D004874 1.0e-21 108.2 187 38.0
Sabra18G0085600 Salix brachista HOM05D004507 ORTHO05D004874 1.0e-21 108.2 185 41.1
TAR625G0362 Trochodendron aralioides HOM05D004507 ORTHO05D004874 1.0e-21 108.2 171 40.4
Atru.chr7.491 Acer truncatum HOM05D004507 ORTHO05D004874 6.6e-21 105.5 180 38.3
Nn2g12545 Nelumbo nucifera HOM05D004507 ORTHO05D004874 1.9e-20 104.0 180 40.0
Ciclev10009640m.g Citrus clementina HOM05D004507 ORTHO05D004874 3.3e-20 103.2 190 38.9
TAR626G0275 Trochodendron aralioides HOM05D004507 ORTHO05D004874 3.3e-20 103.2 181 38.7
TAR636G1916 Trochodendron aralioides HOM05D004507 ORTHO05D004874 4.3e-20 102.8 178 38.2
QL02p095594 Quercus lobata HOM05D004507 ORTHO05D004874 5.6e-20 102.4 182 39.6
Rhsim01G0012400 Rhododendron simsii HOM05D004507 ORTHO05D004874 1.3e-19 101.3 171 39.2
Hma1.2p1_0156F.1_g068730 Hydrangea macrophylla HOM05D004507 ORTHO05D004874 1.6e-19 100.9 176 36.9
MELO3C010170.2 Cucumis melo HOM05D004507 ORTHO05D004874 2.1e-19 100.5 175 38.9
Peaxi162Scf00525g00089 Petunia axillaris HOM05D004507 ORTHO05D004874 2.8e-19 100.1 177 38.4
PGSC0003DMG400011171 Solanum tuberosum HOM05D004507 ORTHO05D004874 2.8e-19 100.1 188 37.8
Gorai.004G273100 Gossypium raimondii HOM05D004507 ORTHO05D004874 3.6e-19 99.8 167 37.7
ClCG06G012890 Citrullus lanatus HOM05D004507 ORTHO05D004874 4.8e-19 99.4 174 39.1
Glyma.17G068800 Glycine max HOM05D004507 ORTHO05D004874 4.8e-19 99.4 175 37.7
Aqoxy7G03243 Aquilegia oxysepala HOM05D004507 ORTHO05D004874 6.2e-19 99.0 184 37.0
Gohir.D08G255900 Gossypium hirsutum HOM05D004507 ORTHO05D004874 6.2e-19 99.0 167 37.7
Sopen07g002400 Solanum pennellii HOM05D004507 ORTHO05D004874 8.1e-19 98.6 191 37.2
Haze_22171 Corylus avellana HOM05D004507 ORTHO05D004874 1.8e-18 97.4 176 37.5
Gohir.A08G235500 Gossypium hirsutum HOM05D004507 ORTHO05D004874 2.4e-18 97.1 168 38.1
Cfa013550 Carpinus fangiana HOM05D004507 ORTHO05D004874 3.1e-18 96.7 175 38.3
Nitab4.5_0002587g0090 Nicotiana tabacum HOM05D004507 ORTHO05D004874 4.0e-18 96.3 179 38.5
COL.COLO4_24287 Corchorus olitorius HOM05D004507 ORTHO05D004874 5.3e-18 95.9 197 38.1
CsaV3_1G029460 Cucumis sativus L. HOM05D004507 ORTHO05D004874 5.3e-18 95.9 175 37.7
Glyma.13G091500 Glycine max HOM05D004507 ORTHO05D004874 6.9e-18 95.5 180 36.1
Gohir.D08G097200 Gossypium hirsutum HOM05D004507 ORTHO05D004874 6.9e-18 95.5 185 36.2
TAR383G0901 Trochodendron aralioides HOM05D004507 ORTHO05D004874 6.9e-18 95.5 173 37.6
CiPaw.07G186500 Carya illinoinensis HOM05D004507 ORTHO05D004874 9.0e-18 95.1 181 35.9
Lj4g0026981 Lotus japonicus HOM05D004507 ORTHO05D004874 1.2e-17 94.7 182 35.2
Nitab4.5_0007380g0020 Nicotiana tabacum HOM05D004507 ORTHO05D004874 1.5e-17 94.4 181 38.7
Phvul.003G151300 Phaseolus vulgaris HOM05D004507 ORTHO05D004874 1.5e-17 94.4 177 37.9
Prupe.1G097600 Prunus persica HOM05D004507 ORTHO05D004874 1.5e-17 94.4 171 38.0
Gorai.004G104000 Gossypium raimondii HOM05D004507 ORTHO05D004874 2.0e-17 94.0 185 35.7
MSTRG.6179 Avicennia marina HOM05D004507 ORTHO05D004874 3.4e-17 93.2 173 37.0
VMungo1215G3417 Vigna mungo HOM05D004507 ORTHO05D004874 4.5e-17 92.8 176 37.5
Sed0006958 Sechium edule HOM05D004507 ORTHO05D004874 5.8e-17 92.4 171 37.4
Ca_21181_v3 Cicer arietinum L. HOM05D004507 ORTHO05D004874 7.6e-17 92.0 171 37.4
Dinv41307 Davidia involucrata HOM05D004507 ORTHO05D004874 7.6e-17 92.0 171 36.3
Nitab4.5_0001427g0130 Nicotiana tabacum HOM05D004507 ORTHO05D004874 9.9e-17 91.7 198 34.3
arahy.Tifrunner.gnm1.ann1.RZ4SGF Arachis hypogaea HOM05D004507 ORTHO05D004874 1.7e-16 90.9 163 41.1
TWI32G0773 Tripterygium wilfordii HOM05D004507 ORTHO05D004874 2.9e-16 90.1 183 39.3
Oeu045661.2 Olea europaea HOM05D004507 ORTHO05D004874 3.8e-16 89.7 174 35.6
arahy.Tifrunner.gnm1.ann1.40EERC Arachis hypogaea HOM05D004507 ORTHO05D004874 4.9e-16 89.4 163 40.5
Eucgr.C00212 Eucalyptus grandis HOM05D004507 ORTHO05D004874 4.9e-16 89.4 192 33.9
Sed0016542 Sechium edule HOM05D004507 ORTHO05D004874 1.4e-15 87.8 177 36.2
EL10Ac8g18870 Beta vulgaris HOM05D004507 ORTHO05D004874 1.9e-15 87.4 188 34.0
Medtr4g129560 Medicago truncatula HOM05D004507 ORTHO05D004874 1.9e-15 87.4 171 34.5
MSTRG.19674 Avicennia marina HOM05D004507 ORTHO05D004874 2.4e-15 87.0 179 36.3
CiPaw.08G040400 Carya illinoinensis HOM05D004507 ORTHO05D004874 3.2e-15 86.7 181 34.3
Migut.K00276 Erythranthe guttata HOM05D004507 ORTHO05D004874 3.2e-15 86.7 176 34.1
TWI34G1692 Tripterygium wilfordii HOM05D004507 ORTHO05D004874 4.2e-15 86.3 184 33.7
Psat0s1742g0040 Pisum sativum HOM05D004507 ORTHO05D004874 7.1e-15 85.5 175 34.9
PSO782G3560 Papaver somniferum HOM05D004507 ORTHO05D004874 9.3e-15 85.1 190 32.6
Lsat_1_v5_gn_8_64381 Lactuca sativa HOM05D004507 ORTHO05D004874 1.2e-14 84.7 185 34.1
Lsat_1_v5_gn_7_51920 Lactuca sativa HOM05D004507 ORTHO05D004874 2.1e-14 84.0 194 32.5
THA.LOC104803518 Tarenaya hassleriana HOM05D004507 ORTHO05D004874 2.7e-14 83.6 172 37.8
ATR0580G302 Amborella trichopoda HOM05D004507 ORTHO05D004874 3.5e-14 83.2 180 32.2
Lalb_Chr12g0199041 Lupinus albus HOM05D004507 ORTHO05D004874 4.6e-14 82.8 180 33.3
TPR.G5348 Trifolium pratense HOM05D004507 ORTHO05D004874 4.6e-14 82.8 175 34.3
Thhalv10026358m.g Eutrema salsugineum HOM05D004507 ORTHO05D004874 6.0e-14 82.4 181 36.5
PGR142G2563 Punica granatum HOM05D004507 ORTHO05D004874 6.0e-14 82.4 183 35.0
ECA240G1410 Erigeron canadensis HOM05D004507 ORTHO05D004874 7.9e-14 82.0 181 33.7
AT5G57780 Arabidopsis thaliana HOM05D004507 ORTHO05D004874 1.3e-13 81.3 155 36.1
SHI24759 Sapria himalayana HOM05D016562 ORTHO05D004874 1.8e-13 80.9 41 97.6
MSTRG.10721 Avicennia marina HOM05D004507 ORTHO05D004874 3.0e-13 80.1 173 33.5
BcaNung02991 Brassica carinata HOM05D004507 ORTHO05D004874 3.0e-13 80.1 181 36.5
Lsat_1_v5_gn_5_87560 Lactuca sativa HOM05D004507 ORTHO05D004874 3.0e-13 80.1 174 31.6
MBI15_g25682_MAGBIO Magnolia biondii HOM05D004507 ORTHO05D004874 3.0e-13 80.1 175 30.3
MD16G1262200 Malus domestica HOM05D004507 ORTHO05D004874 3.0e-13 80.1 165 35.8
HanXRQChr10g0306471 Helianthus annuus HOM05D004507 ORTHO05D004874 3.9e-13 79.7 179 31.3
Sp7g28290 Schrenkiella parvula HOM05D004507 ORTHO05D004874 5.1e-13 79.3 181 35.4
Lalb_Chr13g0300541 Lupinus albus HOM05D004507 ORTHO05D004874 6.7e-13 79.0 180 34.4
AL7G21740 Arabidopsis lyrata HOM05D004507 ORTHO05D004874 1.1e-12 78.2 181 35.4
AT4G30410 Arabidopsis thaliana HOM05D004507 ORTHO05D004874 1.1e-12 78.2 181 35.4
AUR62028409 Chenopodium quinoa HOM05D004507 ORTHO05D004874 1.1e-12 78.2 141 35.5
Carub.0008s1829 Capsella rubella HOM05D004507 ORTHO05D004874 1.9e-12 77.4 154 37.0
MELO3C004096.2 Cucumis melo HOM05D004507 ORTHO05D004874 1.9e-12 77.4 166 35.5
THA.LOC104803927 Tarenaya hassleriana HOM05D004507 ORTHO05D004874 1.9e-12 77.4 193 42.0
A01p07760 Brassica napus HOM05D004507 ORTHO05D004874 2.5e-12 77.0 171 35.7
BraA01t00720Z Brassica rapa HOM05D004507 ORTHO05D004874 2.5e-12 77.0 171 35.7
CARHR238310 Cardamine hirsuta HOM05D004507 ORTHO05D004874 2.5e-12 77.0 181 35.9
ECA234G3792 Erigeron canadensis HOM05D004507 ORTHO05D004874 2.5e-12 77.0 184 32.1
HanXRQChr12g0358031 Helianthus annuus HOM05D004507 ORTHO05D004874 2.5e-12 77.0 159 32.7
C01p08650 Brassica napus HOM05D004507 ORTHO05D004874 3.3e-12 76.6 171 35.7
AUR62039753 Chenopodium quinoa HOM05D004507 ORTHO05D004874 3.3e-12 76.6 141 34.8
THA.LOC104819987 Tarenaya hassleriana HOM05D004507 ORTHO05D004874 4.3e-12 76.3 189 38.6
A08p19250 Brassica napus HOM05D004507 ORTHO05D004874 5.6e-12 75.9 181 34.3
BraA08t33886Z Brassica rapa HOM05D004507 ORTHO05D004874 5.6e-12 75.9 181 34.3
CsaV3_2G007890 Cucumis sativus L. HOM05D004507 ORTHO05D004874 5.6e-12 75.9 169 32.0
MD13G1260000 Malus domestica HOM05D004507 ORTHO05D004874 5.6e-12 75.9 168 35.7
SGA_v2.0_scaffold66G22517 Striga asiatica HOM05D004507 ORTHO05D004874 5.6e-12 75.9 189 32.8
BcaC01g01152 Brassica carinata HOM05D004507 ORTHO05D004874 1.3e-11 74.7 181 33.7
C03p88720 Brassica napus HOM05D004507 ORTHO05D004874 1.3e-11 74.7 181 33.7
Thhalv10014877m.g Eutrema salsugineum HOM05D004507 ORTHO05D004874 1.3e-11 74.7 155 34.8
DCAR_017942 Daucus carota HOM05D004507 ORTHO05D004874 1.6e-11 74.3 194 32.5
BcaB03g12646 Brassica carinata HOM05D004507 ORTHO05D004874 2.1e-11 73.9 181 33.7
BcaB03g12647 Brassica carinata HOM05D004507 ORTHO05D004874 2.1e-11 73.9 181 33.7
BcaB08g36143 Brassica carinata HOM05D004507 ORTHO05D004874 2.1e-11 73.9 157 34.4
Carub.0007s1019 Capsella rubella HOM05D004507 ORTHO05D004874 2.1e-11 73.9 182 33.5
CARHR271510 Cardamine hirsuta HOM05D004507 ORTHO05D004874 2.1e-11 73.9 161 34.8
Oeu031854.1 Olea europaea HOM05D004507 ORTHO05D004874 2.1e-11 73.9 156 34.0
BcaC09g51830 Brassica carinata HOM05D004507 ORTHO05D004874 2.8e-11 73.6 171 35.1
BolC1t00847H Brassica oleracea HOM05D004507 ORTHO05D004874 2.8e-11 73.6 171 35.1
BolC3t21183H Brassica oleracea HOM05D004507 ORTHO05D004874 2.8e-11 73.6 181 33.1
Lalb_Chr07g0180071 Lupinus albus HOM05D004507 ORTHO05D004874 2.8e-11 73.6 185 38.4
AL8G33810 Arabidopsis lyrata HOM05D004507 ORTHO05D004874 3.7e-11 73.2 155 32.9
Sed0015365 Sechium edule HOM05D004507 ORTHO05D004874 3.7e-11 73.2 156 37.2
Zm00001eb412560 Zea mays HOM05D004507 ORTHO05D004874 4.8e-11 72.8 187 30.5
BcaC04g19929 Brassica carinata HOM05D004507 ORTHO05D004874 1.1e-10 71.6 159 34.6
BolC9t57818H Brassica oleracea HOM05D004507 ORTHO05D004874 1.1e-10 71.6 159 34.6
SGA_v2.0_scaffold69G23313 Striga asiatica HOM05D004507 ORTHO05D004874 1.8e-10 70.9 189 36.0
A10p15150 Brassica napus HOM05D004507 ORTHO05D004874 2.4e-10 70.5 159 34.0
BraA10t43598Z Brassica rapa HOM05D004507 ORTHO05D004874 2.4e-10 70.5 159 34.0
HanXRQChr09g0245171 Helianthus annuus HOM05D004507 ORTHO05D004874 3.1e-10 70.1 151 34.4
Sp6g19460 Schrenkiella parvula HOM05D004507 ORTHO05D004874 5.3e-10 69.3 150 32.7
Sed0016375 Sechium edule HOM05D004507 ORTHO05D004874 5.3e-10 69.3 164 30.5
C09p49660 Brassica napus HOM05D004507 ORTHO05D004874 9.0e-10 68.6 158 34.2
MBI14_g08083_MAGBIO Magnolia biondii HOM05D004507 ORTHO05D004874 1.2e-09 68.2 146 32.2
Os02g0178700 Oryza sativa ssp. japonica HOM05D004507 ORTHO05D004874 1.2e-09 68.2 171 33.3
HanXRQChr03g0066301 Helianthus annuus HOM05D004507 ORTHO05D004874 1.5e-09 67.8 151 34.4
THA.LOC104817812 Tarenaya hassleriana HOM05D004507 ORTHO05D004874 1.5e-09 67.8 165 34.5
unitig_62.g23492 Utricularia gibba HOM05D004507 ORTHO05D004874 1.5e-09 67.8 161 32.9
CDE05G1486 Ceratophyllum demersum HOM05D004507 ORTHO05D004874 7.6e-09 65.5 147 32.0
Os02g0791300 Oryza sativa ssp. japonica HOM05D004507 ORTHO05D004874 1.3e-08 64.7 165 34.5
SHI26083 Sapria himalayana HOM05D004507 ORTHO05D004874 1.3e-08 64.7 67 59.7
Aa31LG2G20120 Aethionema arabicum HOM05D004507 ORTHO05D004874 2.2e-08 63.9 179 29.6
CDE02G1288 Ceratophyllum demersum HOM05D004507 ORTHO05D004874 2.9e-08 63.5 147 32.0
Solyc07g006310.1 Solanum lycopersicum HOM05D004507 ORTHO05D004874 3.8e-08 63.2 53 64.2
Zm00001eb389070 Zea mays HOM05D004507 ORTHO05D004874 6.4e-08 62.4 128 35.2
CSS0033256 Camellia sinensis var. sinensis HOM05D004507 ORTHO05D004874 1.9e-07 60.8 73 45.2
GSVIVG01023743001 Vitis vinifera HOM05D004507 ORTHO05D004874 1.9e-07 60.8 78 46.2
Zm00001eb178020 Zea mays HOM05D004507 ORTHO05D004874 4.2e-07 59.7 177 35.6
CANSAT11G0203 Cannabis sativa HOM05D004507 ORTHO05D004874 1.6e-06 57.8 188 37.2
ClCG11G012600 Citrullus lanatus HOM05D004507 ORTHO05D004874 2.7e-06 57.0 51 62.7


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