Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI48919 Sapria himalayana HOM05D000222 ORTHO05D017108 1.1e-40 169.5 82 100.0
SHI40421 Sapria himalayana HOM05D000222 ORTHO05D017108 7.3e-29 130.2 74 86.5
SHI16970 Sapria himalayana HOM05D000222 ORTHO05D017108 1.1e-21 106.3 76 72.4
SHI35748 Sapria himalayana HOM05D000222 ORTHO05D000329 1.3e-17 92.8 50 86.0
SHI39056 Sapria himalayana HOM05D000222 ORTHO05D000329 2.7e-15 85.1 56 71.4
SHI36456 Sapria himalayana HOM05D000222 ORTHO05D000329 1.1e-13 79.7 45 80.0
SHI39032 Sapria himalayana HOM05D000222 ORTHO05D365235 5.3e-11 70.9 73 54.8
SHI01587 Sapria himalayana HOM05D000222 ORTHO05D000329 1.5e-10 69.3 33 97.0
SHI50473 Sapria himalayana HOM05D000222 ORTHO05D017108 7.6e-10 67.0 33 93.9
SHI39648 Sapria himalayana HOM05D000222 ORTHO05D017108 1.0e-09 66.6 46 67.4
SHI38127 Sapria himalayana HOM05D000222 ORTHO05D017108 1.7e-09 65.9 34 88.2
SHI30009 Sapria himalayana HOM05D000222 ORTHO05D000329 2.9e-09 65.1 32 93.8
SHI36263 Sapria himalayana HOM05D000222 ORTHO05D000329 1.1e-08 63.2 33 87.9
SHI31449 Sapria himalayana HOM05D000222 ORTHO05D000329 2.5e-08 62.0 33 84.8
SHI38662 Sapria himalayana HOM05D000222 ORTHO05D017108 2.5e-08 62.0 31 90.3
SHI53017 Sapria himalayana HOM05D000222 ORTHO05D017108 2.5e-08 62.0 32 90.6
SHI38697 Sapria himalayana HOM05D000222 ORTHO05D000329 3.2e-08 61.6 38 76.3
Manes.18G012200 Manihot esculenta HOM05D000222 ORTHO05D000329 1.0e-06 56.6 31 83.9
Carub.0007s1690 Capsella rubella HOM05D000222 ORTHO05D000329 1.8e-06 55.8 31 83.9
Sabra05G0186600 Salix brachista HOM05D000222 ORTHO05D000329 2.3e-06 55.5 31 80.6
FvH4_2g38300 Fragaria vesca HOM05D000222 ORTHO05D000329 3.0e-06 55.1 31 80.6
FAN15G0622 Fragaria x ananassa HOM05D000222 ORTHO05D000329 3.0e-06 55.1 31 80.6
FAN20G2674 Fragaria x ananassa HOM05D000222 ORTHO05D000329 3.0e-06 55.1 31 80.6
FAN27G0624 Fragaria x ananassa HOM05D000222 ORTHO05D000329 3.0e-06 55.1 31 80.6
RcHm_v2.0_Chr6g0303071 Rosa chinensis HOM05D000222 ORTHO05D000329 3.0e-06 55.1 31 80.6
THA.LOC104813226 Tarenaya hassleriana HOM05D000222 ORTHO05D000329 3.0e-06 55.1 31 80.6
EL10Ac1g02175 Beta vulgaris HOM05D000222 ORTHO05D000329 3.9e-06 54.7 31 80.6
AUR62040542 Chenopodium quinoa HOM05D000222 ORTHO05D000329 3.9e-06 54.7 31 80.6
AUR62041482 Chenopodium quinoa HOM05D000222 ORTHO05D000329 3.9e-06 54.7 31 80.6
Sc15g0004910 Simmondsia chinensis HOM05D000222 ORTHO05D000329 3.9e-06 54.7 31 80.6
Cfa013966 Carpinus fangiana HOM05D000222 ORTHO05D000329 5.1e-06 54.3 31 80.6
CiPaw.08G067100 Carya illinoinensis HOM05D000222 ORTHO05D000329 5.1e-06 54.3 31 80.6
ClCG08G014210 Citrullus lanatus HOM05D000222 ORTHO05D000329 5.1e-06 54.3 31 80.6
Ciclev10000296m.g Citrus clementina HOM05D000222 ORTHO05D000329 5.1e-06 54.3 31 80.6
Haze_22648 Corylus avellana HOM05D000222 ORTHO05D000329 5.1e-06 54.3 31 80.6
MELO3C011021.2 Cucumis melo HOM05D000222 ORTHO05D000329 5.1e-06 54.3 31 80.6
CsaV3_2G029630 Cucumis sativus L. HOM05D000222 ORTHO05D000329 5.1e-06 54.3 31 80.6
Duzib093G0379 Durio zibethinus HOM05D000222 ORTHO05D000329 5.1e-06 54.3 31 80.6
Duzib116G0368 Durio zibethinus HOM05D000222 ORTHO05D000329 5.1e-06 54.3 31 80.6
Eucgr.H00972 Eucalyptus grandis HOM05D000222 ORTHO05D000329 5.1e-06 54.3 31 80.6
Gohir.A01G110500 Gossypium hirsutum HOM05D000222 ORTHO05D000329 5.1e-06 54.3 31 80.6
Gohir.A06G002800 Gossypium hirsutum HOM05D000222 ORTHO05D000329 5.1e-06 54.3 31 80.6
Gohir.A06G002900 Gossypium hirsutum HOM05D000222 ORTHO05D000329 5.1e-06 54.3 31 80.6
Gohir.D01G097100 Gossypium hirsutum HOM05D000222 ORTHO05D000329 5.1e-06 54.3 31 80.6
Gohir.D06G005800 Gossypium hirsutum HOM05D000222 ORTHO05D000329 5.1e-06 54.3 31 80.6
Gohir.D06G005900 Gossypium hirsutum HOM05D000222 ORTHO05D000329 5.1e-06 54.3 31 80.6
Gorai.002G122800 Gossypium raimondii HOM05D000222 ORTHO05D000329 5.1e-06 54.3 31 80.6
Gorai.010G003000 Gossypium raimondii HOM05D000222 ORTHO05D000329 5.1e-06 54.3 31 80.6
Potri.005G241100 Populus trichocarpa HOM05D000222 ORTHO05D000329 5.1e-06 54.3 31 77.4
Sed0002325 Sechium edule HOM05D000222 ORTHO05D000329 5.1e-06 54.3 31 80.6
Sed0003929 Sechium edule HOM05D000222 ORTHO05D000329 5.1e-06 54.3 31 80.6
Hund01603 Selenicereus undatus HOM05D000222 ORTHO05D000329 5.1e-06 54.3 31 80.6
SGA_v2.0_scaffold11G05934 Striga asiatica HOM05D000222 ORTHO05D000329 5.1e-06 54.3 31 80.6
Thecc.08G046300 Theobroma cacao HOM05D000222 ORTHO05D000329 5.1e-06 54.3 31 80.6
TWI12G1180 Tripterygium wilfordii HOM05D000222 ORTHO05D000329 5.1e-06 54.3 54 53.7
Psat6g002360 Pisum sativum HOM05D000222 ORTHO05D000329 6.7e-06 53.9 31 80.6
PGR083G1489 Punica granatum HOM05D000222 ORTHO05D000329 6.7e-06 53.9 31 80.6
Aa31sc288G10 Aethionema arabicum HOM05D000222 ORTHO05D000329 8.7e-06 53.5 31 80.6
AL7G29090 Arabidopsis lyrata HOM05D000222 ORTHO05D000329 8.7e-06 53.5 31 80.6
AT4G24190 Arabidopsis thaliana HOM05D000222 ORTHO05D000329 8.7e-06 53.5 31 80.6
BcaC07g38137 Brassica carinata HOM05D000222 ORTHO05D000329 8.7e-06 53.5 31 80.6
BcaC09g50898 Brassica carinata HOM05D000222 ORTHO05D000329 8.7e-06 53.5 31 80.6
BcaNung01125 Brassica carinata HOM05D000222 ORTHO05D000329 8.7e-06 53.5 31 80.6
A01p15520 Brassica napus HOM05D000222 ORTHO05D000329 8.7e-06 53.5 31 80.6
A03p55100 Brassica napus HOM05D000222 ORTHO05D000329 8.7e-06 53.5 31 80.6
A08p21570 Brassica napus HOM05D000222 ORTHO05D000329 8.7e-06 53.5 31 80.6
C01p19440 Brassica napus HOM05D000222 ORTHO05D000329 8.7e-06 53.5 31 80.6
C07p53420 Brassica napus HOM05D000222 ORTHO05D000329 8.7e-06 53.5 31 80.6
BolC1t01873H Brassica oleracea HOM05D000222 ORTHO05D000329 8.7e-06 53.5 31 80.6
BolC7t45836H Brassica oleracea HOM05D000222 ORTHO05D000329 8.7e-06 53.5 31 80.6
BolC8t48563H Brassica oleracea HOM05D000222 ORTHO05D000329 8.7e-06 53.5 31 80.6
BraA01t01491Z Brassica rapa HOM05D000222 ORTHO05D000329 8.7e-06 53.5 31 80.6
BraA03t14570Z Brassica rapa HOM05D000222 ORTHO05D000329 8.7e-06 53.5 31 80.6
BraA08t34104Z Brassica rapa HOM05D000222 ORTHO05D000329 8.7e-06 53.5 31 80.6
CARHR231600 Cardamine hirsuta HOM05D000222 ORTHO05D000329 8.7e-06 53.5 31 80.6
Thhalv10024414m.g Eutrema salsugineum HOM05D000222 ORTHO05D000329 8.7e-06 53.5 31 80.6
Prupe.1G363900 Prunus persica HOM05D000222 ORTHO05D000329 8.7e-06 53.5 31 77.4
Sp7g22160 Schrenkiella parvula HOM05D000222 ORTHO05D000329 8.7e-06 53.5 31 80.6


User provided reference genes

Program Settings