Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI48910 Sapria himalayana HOM05D002965 ORTHO05D010183 5.7e-62 240.7 121 100.0
Sed0028066 Sechium edule HOM05D002965 ORTHO05D010183 3.4e-46 188.3 127 80.3
Sopen05g012840 Solanum pennellii HOM05D002965 ORTHO05D010183 3.0e-39 165.2 115 78.3
Cfa022987 Carpinus fangiana HOM05D002965 ORTHO05D010183 9.8e-38 160.2 92 89.1
Ca_28103_v3 Cicer arietinum L. HOM05D003430 ORTHO05D004809 8.3e-37 157.1 115 72.2
Potri.007G061981 Populus trichocarpa HOM05D002965 ORTHO05D010183 2.7e-35 152.1 78 94.9
Actinidia10888 Actinidia chinensis HOM05D002965 ORTHO05D010183 2.3e-34 149.1 78 93.6
HanXRQChr08g0212281 Helianthus annuus HOM05D002965 ORTHO05D010183 2.3e-34 149.1 78 93.6
HanXRQMTg0579441 Helianthus annuus HOM05D002965 ORTHO05D010183 2.3e-34 149.1 78 93.6
Sp3g25630 Schrenkiella parvula HOM05D002965 ORTHO05D010183 2.3e-34 149.1 78 94.9
QL05p039661 Quercus lobata HOM05D002965 ORTHO05D010183 3.8e-34 148.3 78 92.3
CsaV3_UNG209220 Cucumis sativus L. HOM05D002965 ORTHO05D010183 6.6e-34 147.5 78 93.6
LjContig00315g0010995 Lotus japonicus HOM05D002965 ORTHO05D010183 6.6e-34 147.5 78 93.6
Medtr0082s0280 Medicago truncatula HOM05D002965 ORTHO05D010183 6.6e-34 147.5 78 93.6
Psat3g040160 Pisum sativum HOM05D004537 ORTHO05D005492 6.6e-34 147.5 78 93.6
RcHm_v2.0_MTg0499241 Rosa chinensis HOM05D002965 ORTHO05D010183 6.6e-34 147.5 78 93.6
TPR.G40481 Trifolium pratense HOM05D002965 ORTHO05D010183 6.6e-34 147.5 78 93.6
Lsat_1_v5_gn_4_66041 Lactuca sativa HOM05D002965 ORTHO05D010183 8.6e-34 147.1 101 76.2
Cpa.g.sc263.23 Carica papaya HOM05D002965 ORTHO05D010183 1.1e-33 146.7 78 93.6
Dinv06704 Davidia involucrata HOM05D002965 ORTHO05D010183 1.9e-33 146.0 78 93.6
Hma1.2p1_1338F.1_g276549 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 1.9e-33 146.0 78 93.6
Hma1.2p1_1338F.1_g276560 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 1.9e-33 146.0 78 93.6
arahy.Tifrunner.gnm1.ann1.CG3D8R Arachis hypogaea HOM05D002965 ORTHO05D010183 3.3e-33 145.2 77 93.5
arahy.Tifrunner.gnm1.ann1.EP7E6M Arachis hypogaea HOM05D002965 ORTHO05D010183 3.3e-33 145.2 77 93.5
arahy.Tifrunner.gnm1.ann1.I1QAK6 Arachis hypogaea HOM05D002965 ORTHO05D010183 3.3e-33 145.2 77 93.5
SHI41349 Sapria himalayana HOM05D037518 ORTHO05D010183 3.3e-33 145.2 73 98.6
Ah.10g028480 Amaranthus hybridus HOM05D002965 ORTHO05D010183 5.6e-33 144.4 81 87.7
CAN.G309.4 Capsicum annuum HOM05D002965 ORTHO05D010183 5.6e-33 144.4 78 92.3
Medtr5g040110 Medicago truncatula HOM05D002965 ORTHO05D010183 5.6e-33 144.4 78 92.3
SalBow1G8555 Salvia bowleyana HOM05D002965 ORTHO05D010183 7.3e-33 144.1 78 91.0
Aqoxy1G02687 Aquilegia oxysepala HOM05D002965 ORTHO05D010183 6.1e-32 141.0 78 91.0
SabraMtG0001800 Salix brachista HOM05D001325 ORTHO05D001540 8.0e-32 140.6 93 79.6
unitig_87.g27935 Utricularia gibba HOM05D002965 ORTHO05D010183 2.3e-31 139.0 78 88.5
CAN.G1576.4 Capsicum annuum HOM05D002965 ORTHO05D010183 5.2e-31 137.9 78 89.7
MELO3C031425.2 Cucumis melo HOM05D002965 ORTHO05D010183 6.8e-31 137.5 89 77.5
Nitab4.5_0005613g0040 Nicotiana tabacum HOM05D002965 ORTHO05D010183 2.0e-30 136.0 78 87.2
CAN.G1439.3 Capsicum annuum HOM05D002965 ORTHO05D010183 2.9e-29 132.1 78 85.9
Solyc00g118690.1 Solanum lycopersicum HOM05D002965 ORTHO05D010183 3.7e-29 131.7 98 75.5
Hma1.2p1_0204F.1_g086870 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 3.2e-28 128.6 78 82.1
SGA_v2.0_scaffold479G52282 Striga asiatica HOM05D002965 ORTHO05D010183 3.2e-28 128.6 68 91.2
Nitab4.5_0005831g0070 Nicotiana tabacum HOM05D002965 ORTHO05D010183 1.0e-26 123.6 78 83.3
Nitab4.5_0000172g1470 Nicotiana tabacum HOM05D002965 ORTHO05D010183 5.6e-25 117.9 78 76.9
BNapus_Darmor_BZH_scaffold_234p00020 Brassica napus HOM05D002965 ORTHO05D010183 2.8e-24 115.5 61 95.1
BolSC28t60382H Brassica oleracea HOM05D002965 ORTHO05D010183 2.8e-24 115.5 61 95.1
BolSC28t60415H Brassica oleracea HOM05D002965 ORTHO05D010183 2.8e-24 115.5 61 95.1
BraSC177t45752Z Brassica rapa HOM05D002965 ORTHO05D010183 2.8e-24 115.5 61 95.1
BraSC48t46251Z Brassica rapa HOM05D002965 ORTHO05D010183 2.8e-24 115.5 61 95.1
Nitab4.5_0001761g0080 Nicotiana tabacum HOM05D002965 ORTHO05D010183 6.2e-24 114.4 115 60.0
Hma1.2p1_0713F.1_g207720 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 8.0e-24 114.0 64 92.2
Peaxi162Scf00197g00037 Petunia axillaris HOM05D002965 ORTHO05D010183 3.1e-23 112.1 110 60.0
CDE02G3239 Ceratophyllum demersum HOM05D002965 ORTHO05D010183 5.2e-23 111.3 70 78.6
Lalb_Chr00c21g0405781 Lupinus albus HOM05D002965 ORTHO05D010183 2.2e-21 105.9 55 94.5
RhsimMtG0001000 Rhododendron simsii HOM05D000743 ORTHO05D000580 8.3e-21 104.0 82 69.5
CAN.G390.19 Capsicum annuum HOM05D002965 ORTHO05D010183 1.1e-20 103.6 68 79.4
VMungo0647G1384 Vigna mungo HOM05D002965 ORTHO05D010183 1.4e-20 103.2 53 94.3
Nitab4.5_0001796g0410 Nicotiana tabacum HOM05D002965 ORTHO05D010183 1.9e-20 102.8 55 90.9
CAN.G1061.19 Capsicum annuum HOM05D002965 ORTHO05D010183 3.2e-20 102.1 53 94.3
CAN.G285.11 Capsicum annuum HOM05D002965 ORTHO05D010183 3.2e-20 102.1 53 94.3
ECA039G0012 Erigeron canadensis HOM05D002965 ORTHO05D010183 3.2e-20 102.1 67 79.1
ATMG01120 Arabidopsis thaliana HOM05D002965 ORTHO05D010183 1.0e-18 97.1 49 95.9
Nitab4.5_0002558g0140 Nicotiana tabacum HOM05D002965 ORTHO05D010183 2.3e-18 95.9 55 85.5
Hma1.2p1_0000F.1_g000060 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 9.5e-17 90.5 50 88.0
Psat6g191080 Pisum sativum HOM05D002965 ORTHO05D010183 5.8e-14 81.3 48 81.2
Mapoly0013s0013 Marchantia polymorpha HOM05D002965 ORTHO05D010183 2.4e-12 75.9 50 70.0
SMO053G0011 Selaginella moellendorffii HOM05D002965 ORTHO05D010183 2.1e-11 72.8 52 67.3
CDE02G2102 Ceratophyllum demersum HOM05D002965 ORTHO05D010183 1.0e-10 70.5 51 66.7
CSS0026545 Camellia sinensis var. sinensis HOM05D002965 ORTHO05D010183 1.3e-10 70.1 55 69.1
Sopen05g007970 Solanum pennellii HOM05D002965 ORTHO05D010183 8.6e-10 67.4 36 88.9
BolC7t41501H Brassica oleracea HOM05D002965 ORTHO05D010183 1.1e-09 67.0 36 88.9
Dinv34203 Davidia involucrata HOM05D002965 ORTHO05D010183 2.5e-09 65.9 40 82.5
QL02p008127 Quercus lobata HOM05D003783 ORTHO05D004568 3.1e-07 58.9 30 90.0
Solyc10g018950.1 Solanum lycopersicum HOM05D002965 ORTHO05D010183 8.9e-07 57.4 40 70.0


User provided reference genes

Program Settings