Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI48886 Sapria himalayana HOM05D007985 ORTHO05D000062 6.4e-66 253.8 119 100.0
SHI44265 Sapria himalayana HOM05D007985 ORTHO05D000062 2.3e-55 218.8 118 87.3
SHI40597 Sapria himalayana HOM05D007985 ORTHO05D000062 2.5e-54 215.3 118 84.7
SHI49157 Sapria himalayana HOM05D007985 ORTHO05D000062 2.5e-54 215.3 118 84.7
SHI36577 Sapria himalayana HOM05D007985 ORTHO05D012379 1.5e-35 152.9 93 75.3
SHI49647 Sapria himalayana HOM05D007985 ORTHO05D000062 2.9e-26 122.1 139 45.3
SHI51153 Sapria himalayana HOM05D007985 ORTHO05D000062 2.1e-24 115.9 57 93.0
SHI46513 Sapria himalayana HOM05D000107 ORTHO05D000062 5.1e-23 111.3 103 58.3
SHI37597 Sapria himalayana HOM05D000107 ORTHO05D000062 1.1e-22 110.2 137 46.7
SHI31249 Sapria himalayana HOM05D007985 ORTHO05D000062 2.2e-21 105.9 77 63.6
SHI46624 Sapria himalayana HOM05D007985 ORTHO05D000062 2.2e-18 95.9 148 43.2
SHI19429 Sapria himalayana HOM05D007985 ORTHO05D000062 1.4e-17 93.2 91 56.0
SHI36942 Sapria himalayana HOM05D007985 ORTHO05D012379 1.4e-17 93.2 55 78.2
SHI18287 Sapria himalayana HOM05D007985 ORTHO05D000062 1.9e-17 92.8 155 38.1
SHI22913 Sapria himalayana HOM05D007985 ORTHO05D000062 1.9e-17 92.8 57 71.9
SHI03535 Sapria himalayana HOM05D007985 ORTHO05D000062 1.6e-16 89.7 71 63.4
SHI27019 Sapria himalayana HOM05D007985 ORTHO05D364756 3.0e-15 85.5 55 74.5
SHI29907 Sapria himalayana HOM05D000107 ORTHO05D000062 3.0e-15 85.5 58 69.0
SHI40381 Sapria himalayana HOM05D000107 ORTHO05D000062 3.0e-15 85.5 54 75.9
SHI36043 Sapria himalayana HOM05D007985 ORTHO05D000062 3.9e-15 85.1 96 47.9
SHI45794 Sapria himalayana HOM05D007985 ORTHO05D369989 5.1e-15 84.7 55 70.9
SHI34147 Sapria himalayana HOM05D007985 ORTHO05D000062 1.1e-14 83.6 54 70.4
SHI17893 Sapria himalayana HOM05D007985 ORTHO05D000062 1.5e-14 83.2 61 65.6
SHI27314 Sapria himalayana HOM05D007985 ORTHO05D367126 2.5e-14 82.4 60 70.0
ECA246G4894 Erigeron canadensis HOM05D000107 ORTHO05D000062 4.3e-14 81.6 76 47.4
SHI15708 Sapria himalayana HOM05D007949 ORTHO05D010250 7.4e-14 80.9 55 70.9
SHI45210 Sapria himalayana HOM05D000049 ORTHO05D368211 9.7e-14 80.5 66 60.6
SHI46047 Sapria himalayana HOM05D007985 ORTHO05D364371 9.7e-14 80.5 66 60.6
SHI38541 Sapria himalayana HOM05D000107 ORTHO05D000062 1.7e-13 79.7 54 74.1
SHI45687 Sapria himalayana HOM05D007985 ORTHO05D365459 1.7e-13 79.7 59 64.4
Manes.10G068101 Manihot esculenta HOM05D000107 ORTHO05D000062 3.7e-13 78.6 65 53.8
Manes.04G058760 Manihot esculenta HOM05D000107 ORTHO05D000062 4.8e-13 78.2 59 57.6
Manes.15G191830 Manihot esculenta HOM05D000107 ORTHO05D000062 4.8e-13 78.2 59 57.6
Manes.16G074801 Manihot esculenta HOM05D000107 ORTHO05D000062 4.8e-13 78.2 59 57.6
TWI53G0600 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 4.8e-13 78.2 67 52.2
Manes.13G071916 Manihot esculenta HOM05D000107 ORTHO05D009534 6.3e-13 77.8 63 55.6
TWI81G0480 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 6.3e-13 77.8 67 52.2
TWI32G1089 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.1e-12 77.0 60 55.0
TWI38G0895 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.1e-12 77.0 60 55.0
Manes.17G119950 Manihot esculenta HOM05D000107 ORTHO05D000062 1.4e-12 76.6 103 40.8
SHI05988 Sapria himalayana HOM05D000107 ORTHO05D000062 1.4e-12 76.6 47 76.6
SHI22820 Sapria himalayana HOM05D007949 ORTHO05D000062 1.4e-12 76.6 54 64.8
SHI20342 Sapria himalayana HOM05D007985 ORTHO05D367754 1.8e-12 76.3 58 63.8
SHI13501 Sapria himalayana HOM05D000107 ORTHO05D000062 2.4e-12 75.9 59 55.9
SHI32294 Sapria himalayana HOM05D007985 ORTHO05D000062 2.4e-12 75.9 50 72.0
CAN.G338.14 Capsicum annuum HOM05D015443 ORTHO05D000062 3.1e-12 75.5 58 53.4
SHI50309 Sapria himalayana HOM05D007985 ORTHO05D000062 4.1e-12 75.1 46 73.9
SHI51771 Sapria himalayana HOM05D000107 ORTHO05D000062 5.3e-12 74.7 59 55.9
TWI56G1165 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 5.3e-12 74.7 67 50.7
SHI07609 Sapria himalayana HOM05D000107 ORTHO05D000062 6.9e-12 74.3 58 51.7
SHI49792 Sapria himalayana HOM05D000107 ORTHO05D000062 6.9e-12 74.3 59 55.9
TWI60G0864 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 9.1e-12 73.9 60 53.3
SHI45688 Sapria himalayana HOM05D000107 ORTHO05D000062 2.0e-11 72.8 59 52.5
TWI73G0119 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 2.0e-11 72.8 60 53.3
SHI32907 Sapria himalayana HOM05D007985 ORTHO05D000062 3.4e-11 72.0 79 49.4
SHI38044 Sapria himalayana HOM05D000107 ORTHO05D000062 3.4e-11 72.0 61 54.1
SHI41918 Sapria himalayana HOM05D000107 ORTHO05D000062 3.4e-11 72.0 59 52.5
SHI07613 Sapria himalayana HOM05D000107 ORTHO05D000062 7.7e-11 70.9 56 58.9
SHI38043 Sapria himalayana HOM05D000107 ORTHO05D000062 7.7e-11 70.9 60 50.0
TPR.G11453 Trifolium pratense HOM05D000107 ORTHO05D000062 1.0e-10 70.5 67 46.3
SHI10855 Sapria himalayana HOM05D007985 ORTHO05D000062 1.3e-10 70.1 56 64.3
ECA236G4269 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.7e-10 69.7 76 47.4
SHI06290 Sapria himalayana HOM05D000648 ORTHO05D000062 2.2e-10 69.3 63 54.0
SHI04875 Sapria himalayana HOM05D000107 ORTHO05D000062 2.9e-10 68.9 77 41.6
SHI19236 Sapria himalayana HOM05D007985 ORTHO05D370057 3.8e-10 68.6 60 61.7
TPR.G38773 Trifolium pratense HOM05D000107 ORTHO05D000062 3.8e-10 68.6 68 50.0
TWI81G0027 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 3.8e-10 68.6 67 49.3
SHI36819 Sapria himalayana HOM05D007985 ORTHO05D367757 5.0e-10 68.2 48 66.7
SHI43950 Sapria himalayana HOM05D000107 ORTHO05D000062 5.0e-10 68.2 52 55.8
ECA233G5623 Erigeron canadensis HOM05D000107 ORTHO05D000568 6.5e-10 67.8 69 47.8
ECA234G1982 Erigeron canadensis HOM05D000107 ORTHO05D000062 6.5e-10 67.8 60 51.7
SHI36114 Sapria himalayana HOM05D000107 ORTHO05D000062 6.5e-10 67.8 59 49.2
SHI42354 Sapria himalayana HOM05D000107 ORTHO05D000062 6.5e-10 67.8 59 49.2
ECA248G3962 Erigeron canadensis HOM05D000006 ORTHO05D000062 1.1e-09 67.0 69 46.4
Manes.09G152601 Manihot esculenta HOM05D000107 ORTHO05D000062 1.1e-09 67.0 104 42.3
SHI35609 Sapria himalayana HOM05D000107 ORTHO05D000062 1.1e-09 67.0 60 50.0
SHI37531 Sapria himalayana HOM05D000107 ORTHO05D000062 1.9e-09 66.2 59 49.2
Manes.06G021367 Manihot esculenta HOM05D000107 ORTHO05D000062 2.5e-09 65.9 104 41.3
Manes.11G017526 Manihot esculenta HOM05D000107 ORTHO05D000062 2.5e-09 65.9 104 41.3
ECA247G2380 Erigeron canadensis HOM05D000107 ORTHO05D000062 3.2e-09 65.5 60 50.0
SHI22906 Sapria himalayana HOM05D000107 ORTHO05D000062 3.2e-09 65.5 57 49.1
SHI33764 Sapria himalayana HOM05D000107 ORTHO05D000062 4.2e-09 65.1 57 54.4
TPR.G12582 Trifolium pratense HOM05D000107 ORTHO05D000062 5.5e-09 64.7 57 50.9
TWI18G0474 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 5.5e-09 64.7 60 48.3
HanXRQChr05g0154061 Helianthus annuus HOM05D000107 ORTHO05D000568 7.2e-09 64.3 52 55.8
HanXRQChr05g0154091 Helianthus annuus HOM05D000107 ORTHO05D000568 7.2e-09 64.3 52 55.8
SHI41193 Sapria himalayana HOM05D000107 ORTHO05D000062 9.4e-09 63.9 52 57.7
Sopen11g015700 Solanum pennellii HOM05D000004 ORTHO05D000002 1.2e-08 63.5 60 45.0
TPR.G39680 Trifolium pratense HOM05D000107 ORTHO05D000062 1.2e-08 63.5 51 49.0
TWI59G1045 Tripterygium wilfordii HOM05D008266 ORTHO05D000062 1.6e-08 63.2 52 50.0
BcaC06g34574 Brassica carinata HOM05D008266 ORTHO05D000062 2.1e-08 62.8 59 50.8
BcaC03g18089 Brassica carinata HOM05D008266 ORTHO05D000062 2.7e-08 62.4 59 49.2
COL.COLO4_37049 Corchorus olitorius HOM05D000107 ORTHO05D000062 2.7e-08 62.4 62 43.5
SHI22781 Sapria himalayana HOM05D007985 ORTHO05D000110 3.6e-08 62.0 76 46.1
BcaB01g02847 Brassica carinata HOM05D008266 ORTHO05D000062 4.7e-08 61.6 59 45.8
COL.COLO4_23532 Corchorus olitorius HOM05D000107 ORTHO05D000062 6.1e-08 61.2 109 37.6
SHI05045 Sapria himalayana HOM05D007949 ORTHO05D010250 6.1e-08 61.2 52 57.7
SHI17352 Sapria himalayana HOM05D000107 ORTHO05D000062 6.1e-08 61.2 46 58.7
SHI10866 Sapria himalayana HOM05D000107 ORTHO05D000062 7.9e-08 60.8 64 48.4
ECA234G1021 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.8e-07 59.7 52 48.1
THA.LOC104810147 Tarenaya hassleriana HOM05D008266 ORTHO05D000062 1.8e-07 59.7 58 44.8
TPR.G25746 Trifolium pratense HOM05D000107 ORTHO05D000062 2.3e-07 59.3 50 50.0
ECA246G0176 Erigeron canadensis HOM05D000107 ORTHO05D000062 3.9e-07 58.5 71 40.8
SHI36256 Sapria himalayana HOM05D000107 ORTHO05D000062 3.9e-07 58.5 59 47.5
PGSC0003DMG400032278 Solanum tuberosum HOM05D000107 ORTHO05D017132 3.9e-07 58.5 52 48.1
SHI03544 Sapria himalayana HOM05D007985 ORTHO05D012379 5.1e-07 58.2 36 69.4
CAN.G80.40 Capsicum annuum HOM05D000107 ORTHO05D000062 6.7e-07 57.8 61 44.3
SHI40666 Sapria himalayana HOM05D000648 ORTHO05D009534 8.8e-07 57.4 52 51.9
ECA238G4150 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.1e-06 57.0 54 50.0
COL.COLO4_24208 Corchorus olitorius HOM05D016401 ORTHO05D009534 1.5e-06 56.6 98 37.8
SHI34320 Sapria himalayana HOM05D000107 ORTHO05D000062 1.5e-06 56.6 57 40.4
BcaB02g11280 Brassica carinata HOM05D008266 ORTHO05D000062 2.6e-06 55.8 59 44.1
BcaC06g36414 Brassica carinata HOM05D008266 ORTHO05D000062 2.6e-06 55.8 52 44.2
SHI24990 Sapria himalayana HOM05D007949 ORTHO05D010250 2.6e-06 55.8 30 80.0
Lsat_1_v5_gn_1_25621 Lactuca sativa HOM05D008975 ORTHO05D010134 3.3e-06 55.5 49 44.9
SHI38924 Sapria himalayana HOM05D007985 ORTHO05D368154 3.3e-06 55.5 44 61.4
PGSC0003DMG400014039 Solanum tuberosum HOM05D010076 ORTHO05D012500 3.3e-06 55.5 57 42.1
HanXRQChr09g0265351 Helianthus annuus HOM05D000107 ORTHO05D000062 9.7e-06 53.9 52 48.1


User provided reference genes

Program Settings