Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI48584 Sapria himalayana HOM05D005135 ORTHO05D005810 5.7e-92 340.9 171 100.0
CiPaw.03G100200 Carya illinoinensis HOM05D005135 ORTHO05D005810 1.6e-25 120.2 143 51.0
FAN01G0847 Fragaria x ananassa HOM05D005135 ORTHO05D005810 1.6e-25 120.2 151 48.3
Actinidia31800 Actinidia chinensis HOM05D005135 ORTHO05D005810 2.7e-25 119.4 149 47.7
Hma1.2p1_0488F.1_g163940 Hydrangea macrophylla HOM05D005135 ORTHO05D005810 2.7e-25 119.4 154 48.1
Oeu022533.1 Olea europaea HOM05D005135 ORTHO05D005810 7.9e-25 117.9 150 48.7
Duzib084G0614 Durio zibethinus HOM05D005135 ORTHO05D005810 2.3e-24 116.3 153 49.0
Eucgr.K00188 Eucalyptus grandis HOM05D005135 ORTHO05D005810 2.3e-24 116.3 143 51.7
CSS0048110 Camellia sinensis var. sinensis HOM05D005135 ORTHO05D005810 3.9e-24 115.5 147 47.6
Gohir.D08G104900 Gossypium hirsutum HOM05D005135 ORTHO05D005810 3.9e-24 115.5 153 47.1
GSVIVG01018448001 Vitis vinifera HOM05D005135 ORTHO05D005810 3.9e-24 115.5 153 48.4
Gohir.A08G093700 Gossypium hirsutum HOM05D005135 ORTHO05D005810 1.9e-23 113.2 153 46.4
Thecc.03G166900 Theobroma cacao HOM05D005135 ORTHO05D005810 3.3e-23 112.5 153 46.4
Duzib068G0893 Durio zibethinus HOM05D005135 ORTHO05D005810 4.3e-23 112.1 153 47.1
MSTRG.8780 Avicennia marina HOM05D005135 ORTHO05D005810 5.6e-23 111.7 148 45.3
Gohir.A12G262200 Gossypium hirsutum HOM05D005135 ORTHO05D005810 5.6e-23 111.7 154 48.7
Lj8A32T30 Lonicera japonica HOM05D005135 ORTHO05D005810 7.4e-23 111.3 151 48.3
FAN10G2880 Fragaria x ananassa HOM05D005135 ORTHO05D005810 9.6e-23 110.9 152 46.1
Lj1A988G25 Lonicera japonica HOM05D005135 ORTHO05D005810 9.6e-23 110.9 145 49.0
Dinv35139 Davidia involucrata HOM05D005135 ORTHO05D005810 1.6e-22 110.2 154 44.2
Gorai.008G281800 Gossypium raimondii HOM05D005135 ORTHO05D005810 1.6e-22 110.2 154 46.1
Potri.015G135000 Populus trichocarpa HOM05D005135 ORTHO05D005810 2.1e-22 109.8 154 48.1
Gohir.D12G262900 Gossypium hirsutum HOM05D005135 ORTHO05D005810 3.7e-22 109.0 154 45.5
PSO782G0956 Papaver somniferum HOM05D005135 ORTHO05D005810 4.8e-22 108.6 149 48.3
Peaxi162Scf00557g00212 Petunia axillaris HOM05D005135 ORTHO05D005810 6.2e-22 108.2 154 46.1
Oeu030142.1 Olea europaea HOM05D005135 ORTHO05D005810 8.1e-22 107.8 155 47.1
unitig_52.g17751 Utricularia gibba HOM05D005135 ORTHO05D005810 1.1e-21 107.5 157 43.3
arahy.Tifrunner.gnm1.ann1.UR3NDK Arachis hypogaea HOM05D005135 ORTHO05D005810 1.4e-21 107.1 148 46.6
Ah.07g208790 Amaranthus hybridus HOM05D005135 ORTHO05D005810 2.4e-21 106.3 142 45.8
EL10Ac3g05742 Beta vulgaris HOM05D005135 ORTHO05D005810 2.4e-21 106.3 143 44.1
ClCG05G007690 Citrullus lanatus HOM05D005135 ORTHO05D005810 2.4e-21 106.3 153 45.1
Sabra15G0147000 Salix brachista HOM05D005135 ORTHO05D005810 2.4e-21 106.3 182 40.1
COL.COLO4_14228 Corchorus olitorius HOM05D005135 ORTHO05D005810 3.1e-21 105.9 157 43.9
PGSC0003DMG400027379 Solanum tuberosum HOM05D005135 ORTHO05D005810 4.0e-21 105.5 152 46.7
Sc13g0008230 Simmondsia chinensis HOM05D005135 ORTHO05D005810 5.3e-21 105.1 152 44.7
Cc02_g03590 Coffea canephora HOM05D005135 ORTHO05D005810 6.9e-21 104.8 146 45.9
Nn1g01287 Nelumbo nucifera HOM05D005135 ORTHO05D005810 6.9e-21 104.8 151 45.7
Hund04685 Selenicereus undatus HOM05D005135 ORTHO05D005810 1.2e-20 104.0 143 44.8
Ca_10813_v3 Cicer arietinum L. HOM05D005135 ORTHO05D005810 1.5e-20 103.6 154 46.8
HanXRQChr14g0461821 Helianthus annuus HOM05D005135 ORTHO05D005810 1.5e-20 103.6 140 47.9
Peaxi162Scf00192g00520 Petunia axillaris HOM05D005135 ORTHO05D005810 2.0e-20 103.2 150 44.7
arahy.Tifrunner.gnm1.ann1.3G6IEL Arachis hypogaea HOM05D005135 ORTHO05D005810 2.6e-20 102.8 153 46.4
CAN.G1187.4 Capsicum annuum HOM05D005135 ORTHO05D005810 2.6e-20 102.8 152 44.1
Solyc11g072300.2 Solanum lycopersicum HOM05D005135 ORTHO05D005810 2.6e-20 102.8 151 43.7
Sopen11g029970 Solanum pennellii HOM05D005135 ORTHO05D005810 2.6e-20 102.8 151 43.7
vmacro09870 Vaccinium macrocarpon HOM05D005135 ORTHO05D005810 2.6e-20 102.8 157 42.7
Migut.F01160 Erythranthe guttata HOM05D005135 ORTHO05D005810 3.4e-20 102.4 147 43.5
MELO3C006858.2 Cucumis melo HOM05D005135 ORTHO05D005810 4.5e-20 102.1 153 43.8
Lalb_Chr06g0160891 Lupinus albus HOM05D005135 ORTHO05D005810 4.5e-20 102.1 153 46.4
AUR62021268 Chenopodium quinoa HOM05D005135 ORTHO05D005810 7.6e-20 101.3 146 45.9
Nitab4.5_0000205g0180 Nicotiana tabacum HOM05D005135 ORTHO05D005810 7.6e-20 101.3 154 42.9
Rhsim09G0195100 Rhododendron simsii HOM05D000559 ORTHO05D005810 1.0e-19 100.9 157 42.7
A03p16010 Brassica napus HOM05D005135 ORTHO05D005810 2.2e-19 99.8 148 44.6
Glyma.10G240700 Glycine max HOM05D005135 ORTHO05D005810 2.9e-19 99.4 153 45.1
TWI23G0093 Tripterygium wilfordii HOM05D005135 ORTHO05D005810 2.9e-19 99.4 152 45.4
BolC3t14274H Brassica oleracea HOM05D005135 ORTHO05D005810 3.8e-19 99.0 150 44.0
CsaV3_3G016630 Cucumis sativus L. HOM05D005135 ORTHO05D005810 3.8e-19 99.0 153 43.1
VMungo0464G2082 Vigna mungo HOM05D000559 ORTHO05D005810 4.9e-19 98.6 157 41.4
BcaC01g06140 Brassica carinata HOM05D005135 ORTHO05D005810 8.4e-19 97.8 153 43.8
C03p18840 Brassica napus HOM05D005135 ORTHO05D005810 8.4e-19 97.8 153 43.8
BraA03t10892Z Brassica rapa HOM05D005135 ORTHO05D005810 8.4e-19 97.8 148 44.6
FAN03G3482 Fragaria x ananassa HOM05D005135 ORTHO05D005810 8.4e-19 97.8 155 41.9
Nitab4.5_0001573g0020 Nicotiana tabacum HOM05D005135 ORTHO05D005810 1.1e-18 97.4 140 44.3
Oeu030256.1 Olea europaea HOM05D005135 ORTHO05D005810 1.1e-18 97.4 149 39.6
FAN06G3133 Fragaria x ananassa HOM05D005135 ORTHO05D005810 1.4e-18 97.1 152 43.4
Sed0024541 Sechium edule HOM05D005135 ORTHO05D005810 1.4e-18 97.1 151 43.0
Ciclev10005677m.g Citrus clementina HOM05D005135 ORTHO05D005810 1.9e-18 96.7 154 41.6
Lj5g0000742 Lotus japonicus HOM05D005135 ORTHO05D005810 1.9e-18 96.7 150 42.7
RcHm_v2.0_Chr1g0376221 Rosa chinensis HOM05D005135 ORTHO05D005810 1.9e-18 96.7 155 41.3
PGSC0003DMG400024247 Solanum tuberosum HOM05D005135 ORTHO05D005810 1.9e-18 96.7 150 42.0
Zm00001eb027200 Zea mays HOM05D005135 ORTHO05D005810 1.9e-18 96.7 141 39.0
ECA238G2105 Erigeron canadensis HOM05D005135 ORTHO05D005810 2.5e-18 96.3 148 43.9
FvH4_7g28720 Fragaria vesca HOM05D005135 ORTHO05D005810 2.5e-18 96.3 149 43.6
Lalb_Chr21g0304891 Lupinus albus HOM05D005135 ORTHO05D005810 2.5e-18 96.3 153 43.8
TPR.G17397 Trifolium pratense HOM05D005135 ORTHO05D005810 2.5e-18 96.3 154 44.2
TAR629G2517 Trochodendron aralioides HOM05D005135 ORTHO05D005810 2.5e-18 96.3 157 43.3
FAN06G4903 Fragaria x ananassa HOM05D005135 ORTHO05D005810 3.2e-18 95.9 152 42.8
PSO478G0331 Papaver somniferum HOM05D005135 ORTHO05D005810 3.2e-18 95.9 149 45.6
Prupe.2G287200 Prunus persica HOM05D005135 ORTHO05D005810 3.2e-18 95.9 151 42.4
VMungo0720G1039 Vigna mungo HOM05D005135 ORTHO05D005810 3.2e-18 95.9 153 44.4
Psat7g169320 Pisum sativum HOM05D005135 ORTHO05D005810 5.5e-18 95.1 147 45.6
Solyc03g006850.3 Solanum lycopersicum HOM05D005135 ORTHO05D005810 5.5e-18 95.1 150 42.0
Phvul.007G065300 Phaseolus vulgaris HOM05D005135 ORTHO05D005810 7.1e-18 94.7 153 44.4
Haze_13791 Corylus avellana HOM05D005135 ORTHO05D005810 9.3e-18 94.4 166 40.4
Glyma.20G154000 Glycine max HOM05D005135 ORTHO05D005810 9.3e-18 94.4 163 38.0
SGA_v2.0_scaffold303G47872 Striga asiatica HOM05D005135 ORTHO05D005810 9.3e-18 94.4 158 41.1
ATR0661G043 Amborella trichopoda HOM05D005135 ORTHO05D005810 1.2e-17 94.0 156 41.7
CDE07G1455 Ceratophyllum demersum HOM05D005135 ORTHO05D005810 1.2e-17 94.0 158 41.1
FAN03G1115 Fragaria x ananassa HOM05D005135 ORTHO05D005810 1.2e-17 94.0 177 39.5
Manes.14G031000 Manihot esculenta HOM05D005135 ORTHO05D005810 1.6e-17 93.6 175 38.9
SGA_v2.0_scaffold10G05426 Striga asiatica HOM05D005135 ORTHO05D005810 1.6e-17 93.6 148 44.6
CAN.G1182.3 Capsicum annuum HOM05D005135 ORTHO05D005810 2.7e-17 92.8 150 41.3
Sopen03g002840 Solanum pennellii HOM05D005135 ORTHO05D005810 2.7e-17 92.8 150 41.3
BcaB08g35536 Brassica carinata HOM05D005135 ORTHO05D005810 6.0e-17 91.7 147 41.5
Potri.012G132832 Populus trichocarpa HOM05D005135 ORTHO05D005810 6.0e-17 91.7 149 45.0
Sed0023089 Sechium edule HOM05D005135 ORTHO05D005810 6.0e-17 91.7 151 40.4
Aqoxy7G00498 Aquilegia oxysepala HOM05D005135 ORTHO05D005810 1.0e-16 90.9 152 44.1
BcaB01g04154 Brassica carinata HOM05D005135 ORTHO05D005810 1.8e-16 90.1 149 39.6
Sp6g14090 Schrenkiella parvula HOM05D005135 ORTHO05D005810 3.9e-16 89.0 158 39.9
MD01G1193100 Malus domestica HOM05D005135 ORTHO05D005810 5.1e-16 88.6 144 38.9
Thhalv10014510m.g Eutrema salsugineum HOM05D005135 ORTHO05D005810 1.1e-15 87.4 148 39.2
AL8G26130 Arabidopsis lyrata HOM05D005135 ORTHO05D005810 1.5e-15 87.0 154 39.6
Medtr1g101945 Medicago truncatula HOM05D005135 ORTHO05D005810 1.5e-15 87.0 158 40.5
Rhsim03G0174700 Rhododendron simsii HOM05D000559 ORTHO05D000596 1.9e-15 86.7 151 39.1
Carub.0008s1186 Capsella rubella HOM05D005135 ORTHO05D005810 2.5e-15 86.3 159 39.0
MD00G1004200 Malus domestica HOM05D005135 ORTHO05D005810 2.5e-15 86.3 145 38.6
TWI39G0390 Tripterygium wilfordii HOM05D005135 ORTHO05D005810 4.3e-15 85.5 150 40.7
Aa31LG3G8280 Aethionema arabicum HOM05D005135 ORTHO05D005810 5.7e-15 85.1 147 40.8
DCAR_020208 Daucus carota HOM05D005135 ORTHO05D005810 5.7e-15 85.1 145 41.4
HPP92_001719 Vanilla planifolia HOM05D005135 ORTHO05D005810 5.7e-15 85.1 144 40.3
HPP92_001726 Vanilla planifolia HOM05D005135 ORTHO05D005810 5.7e-15 85.1 144 40.3
AT5G51840 Arabidopsis thaliana HOM05D005135 ORTHO05D005810 1.3e-14 84.0 159 39.0
Dinv28508 Davidia involucrata HOM05D005135 ORTHO05D005810 1.3e-14 84.0 57 71.9
CARHR264720 Cardamine hirsuta HOM05D005135 ORTHO05D005810 2.1e-14 83.2 154 39.0
AUR62016060 Chenopodium quinoa HOM05D005135 ORTHO05D005810 2.1e-14 83.2 136 39.7
Lsat_1_v5_gn_2_130120 Lactuca sativa HOM05D005135 ORTHO05D005810 1.4e-13 80.5 156 39.7
vmacro06737 Vaccinium macrocarpon HOM05D005135 ORTHO05D005810 6.9e-13 78.2 61 59.0
Hma1.2p1_3202F.1_g333920 Hydrangea macrophylla HOM05D005135 ORTHO05D005810 2.0e-12 76.6 53 71.7
PGR042G3048 Punica granatum HOM05D005135 ORTHO05D005810 2.6e-12 76.3 54 66.7
CDE04G3520 Ceratophyllum demersum HOM05D005135 ORTHO05D005810 2.2e-11 73.2 120 40.8
TAR291G0007 Trochodendron aralioides HOM05D005135 ORTHO05D005810 2.2e-11 73.2 118 39.0
Actinidia03096 Actinidia chinensis HOM05D005135 ORTHO05D005810 3.8e-11 72.4 152 36.2
PGR142G1544 Punica granatum HOM05D005135 ORTHO05D005810 1.1e-10 70.9 153 36.6
Gohir.D04G141600 Gossypium hirsutum HOM05D005135 ORTHO05D005810 1.4e-10 70.5 51 64.7
Actinidia14214 Actinidia chinensis HOM05D005135 ORTHO05D005810 2.7e-09 66.2 96 47.9
SEGI_16349 Sequoiadendron giganteum HOM05D056048 ORTHO05D005810 1.0e-08 64.3 166 27.7
AagrBONN_evm.TU.Sc2ySwM_117.1266 Anthoceros agrestis HOM05D005135 ORTHO05D005810 3.0e-08 62.8 50 58.0
Mapoly0096s0072 Marchantia polymorpha HOM05D005135 ORTHO05D005810 6.7e-08 61.6 157 31.2


User provided reference genes

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