Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI47635 Sapria himalayana HOM05D000762 ORTHO05D006179 2.7e-152 542.0 269 100.0
SHI48355 Sapria himalayana HOM05D000762 ORTHO05D006179 2.7e-152 542.0 269 100.0
SHI33824 Sapria himalayana HOM05D000762 ORTHO05D006179 1.3e-53 214.2 340 44.4
SHI33058 Sapria himalayana HOM05D000762 ORTHO05D006179 8.3e-37 158.3 265 43.4
SHI48647 Sapria himalayana HOM05D000762 ORTHO05D364233 1.9e-33 147.1 173 50.9
SHI53217 Sapria himalayana HOM05D000762 ORTHO05D006179 7.2e-33 145.2 127 63.8
SHI53758 Sapria himalayana HOM05D000762 ORTHO05D006179 7.2e-33 145.2 127 63.8
SHI53852 Sapria himalayana HOM05D000762 ORTHO05D006179 7.2e-33 145.2 127 63.8
SHI54089 Sapria himalayana HOM05D000762 ORTHO05D006179 7.2e-33 145.2 127 63.8
Manes.15G190150 Manihot esculenta HOM05D000762 ORTHO05D006179 3.4e-22 109.8 368 30.7
MBI04_g30784_MAGBIO Magnolia biondii HOM05D000762 ORTHO05D006179 1.3e-21 107.8 182 41.8
Aqoxy3G01997 Aquilegia oxysepala HOM05D000762 ORTHO05D006179 1.1e-20 104.8 208 37.0
CiPaw.11G076700 Carya illinoinensis HOM05D000762 ORTHO05D006179 1.4e-20 104.4 359 30.4
Nn1g09246 Nelumbo nucifera HOM05D000762 ORTHO05D006179 9.2e-20 101.7 365 29.3
RcHm_v2.0_Chr7g0214871 Rosa chinensis HOM05D000762 ORTHO05D006179 9.2e-20 101.7 366 29.0
Sabra03G0072900 Salix brachista HOM05D000762 ORTHO05D006179 9.2e-20 101.7 364 28.6
Gohir.A12G200600 Gossypium hirsutum HOM05D000762 ORTHO05D006179 1.2e-19 101.3 217 34.6
Peaxi162Scf00157g01314 Petunia axillaris HOM05D000762 ORTHO05D006179 1.6e-19 100.9 183 39.9
Eucgr.D02578 Eucalyptus grandis HOM05D000762 ORTHO05D006179 2.0e-19 100.5 357 28.3
Potri.003G106000 Populus trichocarpa HOM05D000762 ORTHO05D006179 2.0e-19 100.5 364 28.3
Gohir.D12G203400 Gossypium hirsutum HOM05D000762 ORTHO05D006179 2.7e-19 100.1 217 35.0
Duzib068G0194 Durio zibethinus HOM05D000762 ORTHO05D006179 3.5e-19 99.8 190 37.9
TAR374G0039 Trochodendron aralioides HOM05D000762 ORTHO05D006179 3.5e-19 99.8 183 41.0
CSS0047392 Camellia sinensis var. sinensis HOM05D000762 ORTHO05D006179 4.6e-19 99.4 209 36.8
MSTRG.11843 Avicennia marina HOM05D000762 ORTHO05D006179 7.8e-19 98.6 185 36.2
Gorai.008G218200 Gossypium raimondii HOM05D000762 ORTHO05D006179 7.8e-19 98.6 217 34.6
Lj2g0003478 Lotus japonicus HOM05D000762 ORTHO05D006179 7.8e-19 98.6 185 37.8
Thecc.03G322500 Theobroma cacao HOM05D000762 ORTHO05D006179 1.0e-18 98.2 186 37.6
CSS0006761 Camellia sinensis var. sinensis HOM05D000762 ORTHO05D006179 1.3e-18 97.8 362 28.5
Prupe.5G016000 Prunus persica HOM05D000762 ORTHO05D006179 1.3e-18 97.8 364 29.1
MD16G1287200 Malus domestica HOM05D000762 ORTHO05D006179 3.9e-18 96.3 203 36.9
vmacro00115 Vaccinium macrocarpon HOM05D000762 ORTHO05D006179 3.9e-18 96.3 183 37.7
COL.COLO4_16726 Corchorus olitorius HOM05D000762 ORTHO05D006179 5.0e-18 95.9 216 32.9
Psat2g144120 Pisum sativum HOM05D000762 ORTHO05D006179 6.6e-18 95.5 203 36.9
Actinidia30332 Actinidia chinensis HOM05D000762 ORTHO05D006179 8.6e-18 95.1 197 36.0
FAN18G3726 Fragaria x ananassa HOM05D000762 ORTHO05D006179 1.1e-17 94.7 216 33.3
QL12p002432 Quercus lobata HOM05D000762 ORTHO05D006179 1.5e-17 94.4 194 37.1
Solyc08g075010.4 Solanum lycopersicum HOM05D000762 ORTHO05D006179 1.5e-17 94.4 361 28.5
FAN08G1370 Fragaria x ananassa HOM05D000762 ORTHO05D006179 1.9e-17 94.0 203 35.0
CANSAT11G0376 Cannabis sativa HOM05D000762 ORTHO05D006179 2.5e-17 93.6 216 34.7
ClCG11G016210 Citrullus lanatus HOM05D007105 ORTHO05D009304 2.5e-17 93.6 314 29.0
Dinv09425 Davidia involucrata HOM05D000762 ORTHO05D006179 2.5e-17 93.6 183 38.3
FvH4_5g24460 Fragaria vesca HOM05D000762 ORTHO05D006179 2.5e-17 93.6 216 33.3
arahy.Tifrunner.gnm1.ann1.GB6XSM Arachis hypogaea HOM05D000762 ORTHO05D006179 3.3e-17 93.2 184 36.4
arahy.Tifrunner.gnm1.ann1.RB8GEU Arachis hypogaea HOM05D000762 ORTHO05D006179 3.3e-17 93.2 184 36.4
Haze_08030 Corylus avellana HOM05D000762 ORTHO05D006179 3.3e-17 93.2 195 35.9
Glyma.09G216700 Glycine max HOM05D000762 ORTHO05D006179 3.3e-17 93.2 185 35.7
PGSC0003DMG401015717 Solanum tuberosum HOM05D000762 ORTHO05D006179 4.3e-17 92.8 362 28.5
TPR.G30313 Trifolium pratense HOM05D000762 ORTHO05D006179 4.3e-17 92.8 207 34.8
FAN13G3000 Fragaria x ananassa HOM05D000762 ORTHO05D006179 5.6e-17 92.4 216 33.3
Sc07g0008180 Simmondsia chinensis HOM05D000762 ORTHO05D006179 5.6e-17 92.4 374 28.1
Atru.chr6.2127 Acer truncatum HOM05D000762 ORTHO05D006179 7.3e-17 92.0 382 28.3
BraA08t33051Z Brassica rapa HOM05D000762 ORTHO05D006179 7.3e-17 92.0 355 28.5
Sopen08g023620 Solanum pennellii HOM05D000762 ORTHO05D006179 7.3e-17 92.0 361 28.8
Ca_25069_v3 Cicer arietinum L. HOM05D000762 ORTHO05D006179 9.5e-17 91.7 189 36.5
FAN13G2277 Fragaria x ananassa HOM05D000762 ORTHO05D006179 9.5e-17 91.7 216 32.9
Nitab4.5_0001132g0020 Nicotiana tabacum HOM05D000762 ORTHO05D006179 9.5e-17 91.7 184 37.5
FAN04G2135 Fragaria x ananassa HOM05D000762 ORTHO05D006179 1.6e-16 90.9 216 32.9
Nitab4.5_0002799g0030 Nicotiana tabacum HOM05D000762 ORTHO05D006179 1.6e-16 90.9 334 30.5
TWI32G0449 Tripterygium wilfordii HOM05D000762 ORTHO05D006179 1.6e-16 90.9 367 26.4
AUR62027292 Chenopodium quinoa HOM05D000762 ORTHO05D006179 3.6e-16 89.7 201 35.3
BcaC07g37754 Brassica carinata HOM05D000762 ORTHO05D006179 4.7e-16 89.4 186 37.6
BolC8t48139H Brassica oleracea HOM05D000762 ORTHO05D006179 4.7e-16 89.4 186 37.6
Phvul.002G124000 Phaseolus vulgaris HOM05D000762 ORTHO05D006179 4.7e-16 89.4 186 37.1
THA.LOC104814382 Tarenaya hassleriana HOM05D000762 ORTHO05D006179 4.7e-16 89.4 374 27.0
Hma1.2p1_0262F.1_g105200 Hydrangea macrophylla HOM05D000762 ORTHO05D006179 6.2e-16 89.0 184 37.0
Hma1.2p1_0262F.1_g105210 Hydrangea macrophylla HOM05D000762 ORTHO05D006179 6.2e-16 89.0 184 37.0
Medtr5g026280 Medicago truncatula HOM05D000762 ORTHO05D006179 6.2e-16 89.0 185 35.7
Os05g0389500 Oryza sativa ssp. japonica HOM05D000762 ORTHO05D006179 6.2e-16 89.0 206 32.0
TPR.G30319 Trifolium pratense HOM05D000762 ORTHO05D006179 6.2e-16 89.0 207 34.3
GSVIVG01036916001 Vitis vinifera HOM05D000762 ORTHO05D006179 6.2e-16 89.0 268 33.2
HanXRQChr07g0204501 Helianthus annuus HOM05D000762 ORTHO05D006179 8.0e-16 88.6 185 35.1
SalBow4G2613 Salvia bowleyana HOM05D000762 ORTHO05D006179 8.0e-16 88.6 190 34.7
EL10Ac5g11870 Beta vulgaris HOM05D000762 ORTHO05D006179 1.1e-15 88.2 185 36.8
CDE11G1126 Ceratophyllum demersum HOM05D000762 ORTHO05D006179 1.1e-15 88.2 184 39.1
ECA233G0984 Erigeron canadensis HOM05D000762 ORTHO05D006179 1.1e-15 88.2 196 34.2
MELO3C010539.2 Cucumis melo HOM05D000762 ORTHO05D006179 1.4e-15 87.8 187 35.8
VMungo1215G2102 Vigna mungo HOM05D000762 ORTHO05D006179 1.4e-15 87.8 196 35.7
Lalb_Chr16g0380531 Lupinus albus HOM05D000762 ORTHO05D006179 1.8e-15 87.4 195 37.4
Lsat_1_v5_gn_8_24940 Lactuca sativa HOM05D000762 ORTHO05D006179 2.3e-15 87.0 184 35.3
SGA_v2.0_scaffold27G11724 Striga asiatica HOM05D000762 ORTHO05D006179 3.1e-15 86.7 180 36.7
Cc08_g04650 Coffea canephora HOM05D000762 ORTHO05D006179 4.0e-15 86.3 359 28.4
unitig_899.g14971 Utricularia gibba HOM05D000351 ORTHO05D006179 6.8e-15 85.5 180 35.0
HPP92_022767 Vanilla planifolia HOM05D000762 ORTHO05D006179 1.2e-14 84.7 178 36.0
PGR031G0157 Punica granatum HOM05D000762 ORTHO05D006179 2.0e-14 84.0 433 26.6
SHI32997 Sapria himalayana HOM05D000762 ORTHO05D006179 2.0e-14 84.0 116 46.6
Aa31LG2G14450 Aethionema arabicum HOM05D000762 ORTHO05D006179 2.6e-14 83.6 189 36.5
AUR62007444 Chenopodium quinoa HOM05D000762 ORTHO05D006179 2.6e-14 83.6 208 34.1
ATR0568G206 Amborella trichopoda HOM05D000762 ORTHO05D006179 4.4e-14 82.8 182 34.1
CsaV3_4G037910 Cucumis sativus L. HOM05D000762 ORTHO05D006179 4.4e-14 82.8 188 33.5
BcaB07g32811 Brassica carinata HOM05D000762 ORTHO05D006179 7.5e-14 82.0 186 37.1
Ciclev10001424m.g Citrus clementina HOM05D000762 ORTHO05D006179 9.8e-14 81.6 189 34.4
Glyma.01G151466 Glycine max HOM05D000762 ORTHO05D006179 9.8e-14 81.6 147 38.8
Ca_18033_v3 Cicer arietinum L. HOM05D000762 ORTHO05D006179 1.3e-13 81.3 150 38.0
DCAR_030950 Daucus carota HOM05D000762 ORTHO05D006179 4.9e-13 79.3 199 33.2
A08p10520 Brassica napus HOM05D007105 ORTHO05D006179 4.1e-12 76.3 173 30.6
CARHR287020 Cardamine hirsuta HOM05D000762 ORTHO05D006179 9.2e-12 75.1 143 38.5
Duzib114G0367 Durio zibethinus HOM05D000762 ORTHO05D006179 9.2e-12 75.1 321 26.2
BcaC05g27179 Brassica carinata HOM05D000762 ORTHO05D006179 1.6e-11 74.3 147 39.5
A09p34690 Brassica napus HOM05D000762 ORTHO05D006179 1.6e-11 74.3 147 39.5
C05p30750 Brassica napus HOM05D000762 ORTHO05D006179 1.6e-11 74.3 147 39.5
BolC5t31807H Brassica oleracea HOM05D000762 ORTHO05D006179 1.6e-11 74.3 147 39.5
Thhalv10007841m.g Eutrema salsugineum HOM05D000762 ORTHO05D006179 2.7e-11 73.6 148 32.4
Hund11080 Selenicereus undatus HOM05D000762 ORTHO05D006179 2.7e-11 73.6 107 42.1
AL1G49550 Arabidopsis lyrata HOM05D000762 ORTHO05D006179 6.0e-11 72.4 148 32.4
Sed0017777 Sechium edule HOM05D000762 ORTHO05D006179 7.8e-11 72.0 146 35.6
BcaB04g18149 Brassica carinata HOM05D000762 ORTHO05D006179 1.7e-10 70.9 163 29.4
Rhsim11G0040700 Rhododendron simsii HOM05D000762 ORTHO05D006179 2.3e-10 70.5 85 49.4
Carub.0001s2992 Capsella rubella HOM05D000762 ORTHO05D006179 3.9e-10 69.7 148 33.1
SMO167G0012 Selaginella moellendorffii HOM05D000762 ORTHO05D006179 3.9e-10 69.7 224 27.7
AagrBONN_evm.TU.Sc2ySwM_344.1125 Anthoceros agrestis HOM05D000762 ORTHO05D006179 6.6e-10 68.9 201 28.9
Sp1g27300 Schrenkiella parvula HOM05D000762 ORTHO05D006179 6.6e-10 68.9 191 27.7
Lj8A371G20 Lonicera japonica HOM05D000762 ORTHO05D006179 8.6e-10 68.6 87 47.1
Migut.A00494 Erythranthe guttata HOM05D000762 ORTHO05D006179 1.5e-09 67.8 89 44.9
SMO347G0652 Selaginella moellendorffii HOM05D000762 ORTHO05D006179 3.3e-09 66.6 205 29.3
AT1G31500 Arabidopsis thaliana HOM05D000762 ORTHO05D006179 4.3e-09 66.2 87 47.1
PSO063G1071 Papaver somniferum HOM05D000762 ORTHO05D006179 4.3e-09 66.2 89 44.9
SHI39721 Sapria himalayana HOM05D000024 ORTHO05D000007 7.3e-09 65.5 69 58.0
Pp3c22_8300 Physcomitrium patens HOM05D000762 ORTHO05D006179 9.5e-09 65.1 133 31.6
AL1G49510 Arabidopsis lyrata HOM05D000762 ORTHO05D006179 6.2e-08 62.4 190 30.5
CsaV3_UNG224740 Cucumis sativus L. HOM05D000762 ORTHO05D006179 2.3e-07 60.5 46 63.0
SHI31009 Sapria himalayana HOM05D000762 ORTHO05D006179 2.3e-07 60.5 60 60.0
CsaV3_5G019990 Cucumis sativus L. HOM05D000762 ORTHO05D006179 3.1e-07 60.1 49 59.2
Cpa.g.sc24.94 Carica papaya HOM05D000762 ORTHO05D006179 9.9e-06 55.1 49 57.1


User provided reference genes

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