Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI48256 Sapria himalayana HOM05D000219 ORTHO05D010276 2.4e-30 134.8 66 100.0
SHI46048 Sapria himalayana HOM05D000219 ORTHO05D010276 3.2e-27 124.4 62 95.2
SHI46806 Sapria himalayana HOM05D000219 ORTHO05D010276 3.2e-27 124.4 62 95.2
SHI48912 Sapria himalayana HOM05D000219 ORTHO05D010276 3.7e-23 110.9 67 83.6
SHI49309 Sapria himalayana HOM05D000219 ORTHO05D010276 3.7e-23 110.9 67 83.6
SHI53277 Sapria himalayana HOM05D000219 ORTHO05D010276 7.0e-22 106.7 67 85.1
SHI47289 Sapria himalayana HOM05D000219 ORTHO05D010276 1.3e-20 102.4 62 85.5
SHI49217 Sapria himalayana HOM05D000219 ORTHO05D010276 1.3e-20 102.4 62 85.5
SHI50751 Sapria himalayana HOM05D000219 ORTHO05D010276 8.6e-20 99.8 54 90.7
SHI53622 Sapria himalayana HOM05D000219 ORTHO05D010276 1.9e-19 98.6 61 83.6
SHI50515 Sapria himalayana HOM05D000219 ORTHO05D010276 8.0e-18 93.2 70 68.6
SHI47776 Sapria himalayana HOM05D000219 ORTHO05D010276 4.9e-15 84.0 47 85.1
SHI49809 Sapria himalayana HOM05D000219 ORTHO05D010276 1.4e-14 82.4 49 83.7
SHI50011 Sapria himalayana HOM05D000219 ORTHO05D010276 1.4e-14 82.4 49 83.7
SHI50254 Sapria himalayana HOM05D000219 ORTHO05D010276 1.4e-14 82.4 49 83.7
SHI50990 Sapria himalayana HOM05D000219 ORTHO05D010276 1.4e-14 82.4 49 83.7
SHI39844 Sapria himalayana HOM05D000219 ORTHO05D010276 7.0e-14 80.1 49 81.6
SHI46224 Sapria himalayana HOM05D000219 ORTHO05D370485 7.0e-14 80.1 42 90.5
SHI47031 Sapria himalayana HOM05D000219 ORTHO05D010276 9.2e-14 79.7 47 85.1
SHI50092 Sapria himalayana HOM05D000219 ORTHO05D010276 9.2e-14 79.7 59 66.1
SHI51293 Sapria himalayana HOM05D000219 ORTHO05D010276 9.2e-14 79.7 49 81.6
SHI52092 Sapria himalayana HOM05D000219 ORTHO05D010276 9.2e-14 79.7 42 90.5
SHI50432 Sapria himalayana HOM05D000219 ORTHO05D010276 1.6e-13 79.0 49 81.6
SHI50826 Sapria himalayana HOM05D000219 ORTHO05D010276 1.6e-13 79.0 49 79.6
SHI36796 Sapria himalayana HOM05D000219 ORTHO05D010276 3.5e-13 77.8 49 79.6
SHI50538 Sapria himalayana HOM05D000219 ORTHO05D010276 3.5e-13 77.8 48 79.2
SHI52107 Sapria himalayana HOM05D000219 ORTHO05D010276 4.5e-13 77.4 49 77.6
SHI44937 Sapria himalayana HOM05D000219 ORTHO05D010276 5.9e-13 77.0 49 77.6
SHI50752 Sapria himalayana HOM05D000219 ORTHO05D010276 5.9e-13 77.0 49 81.6
SHI51431 Sapria himalayana HOM05D000219 ORTHO05D010276 5.9e-13 77.0 42 88.1
SHI53731 Sapria himalayana HOM05D000219 ORTHO05D010276 1.0e-12 76.3 42 85.7
SHI51656 Sapria himalayana HOM05D014257 ORTHO05D006170 1.3e-12 75.9 43 86.0
SHI51978 Sapria himalayana HOM05D000219 ORTHO05D010276 1.7e-12 75.5 47 80.9
SHI54810 Sapria himalayana HOM05D000219 ORTHO05D010276 3.9e-12 74.3 42 85.7
SHI36458 Sapria himalayana HOM05D014257 ORTHO05D365477 8.6e-12 73.2 41 85.4
SHI50787 Sapria himalayana HOM05D000219 ORTHO05D010276 8.6e-12 73.2 48 77.1
SHI51776 Sapria himalayana HOM05D000219 ORTHO05D010276 8.6e-12 73.2 48 77.1
SHI53988 Sapria himalayana HOM05D000219 ORTHO05D365004 1.9e-11 72.0 37 91.9
SHI30011 Sapria himalayana HOM05D014257 ORTHO05D006170 2.5e-11 71.6 43 79.1
SHI51936 Sapria himalayana HOM05D014257 ORTHO05D367911 7.3e-11 70.1 41 80.5
Sabra04G0044900 Salix brachista HOM05D000219 ORTHO05D000226 9.5e-11 69.7 64 54.7
SHI49537 Sapria himalayana HOM05D014257 ORTHO05D006170 9.5e-11 69.7 43 76.7
SHI39058 Sapria himalayana HOM05D014257 ORTHO05D369945 1.6e-10 68.9 41 82.9
Oeu062062.1 Olea europaea HOM05D000219 ORTHO05D000226 3.6e-10 67.8 63 55.6
Nn3g18548 Nelumbo nucifera HOM05D000219 ORTHO05D000226 4.7e-10 67.4 63 55.6
AL6G36350 Arabidopsis lyrata HOM05D000219 ORTHO05D000226 6.1e-10 67.0 63 50.8
CARHR188730 Cardamine hirsuta HOM05D000219 ORTHO05D000226 6.1e-10 67.0 63 52.4
Thhalv10004400m.g Eutrema salsugineum HOM05D000219 ORTHO05D000226 6.1e-10 67.0 63 52.4
SHI39611 Sapria himalayana HOM05D014257 ORTHO05D010276 6.1e-10 67.0 41 78.0
Sp2g22670 Schrenkiella parvula HOM05D000219 ORTHO05D000226 6.1e-10 67.0 63 52.4
Glyma.09G161600 Glycine max HOM05D000219 ORTHO05D000226 8.0e-10 66.6 63 55.6
Lj2g0026377 Lotus japonicus HOM05D000219 ORTHO05D000226 8.0e-10 66.6 63 55.6
Potri.004G067000 Populus trichocarpa HOM05D000219 ORTHO05D000226 8.0e-10 66.6 63 52.4
TPR.G26646 Trifolium pratense HOM05D000219 ORTHO05D000226 1.0e-09 66.2 63 54.0
C02p60090 Brassica napus HOM05D000219 ORTHO05D009306 1.4e-09 65.9 63 50.8
SalBow5G1826 Salvia bowleyana HOM05D000219 ORTHO05D000226 1.4e-09 65.9 63 52.4
BcaC03g17949 Brassica carinata HOM05D000219 ORTHO05D009306 2.3e-09 65.1 63 50.8
A02p40120 Brassica napus HOM05D000219 ORTHO05D009306 2.3e-09 65.1 63 50.8
BolC2t12063H Brassica oleracea HOM05D000219 ORTHO05D000226 2.3e-09 65.1 63 50.8
BraA02t08978Z Brassica rapa HOM05D000219 ORTHO05D000226 2.3e-09 65.1 63 50.8
Carub.0006s2261 Capsella rubella HOM05D000219 ORTHO05D000226 2.3e-09 65.1 63 50.8
AT5G24760 Arabidopsis thaliana HOM05D000219 ORTHO05D000226 3.1e-09 64.7 65 49.2
Eucgr.K02331 Eucalyptus grandis HOM05D000219 ORTHO05D000226 3.1e-09 64.7 63 50.8
PGR044G1542 Punica granatum HOM05D000219 ORTHO05D000226 3.1e-09 64.7 63 54.0
TPR.G26649 Trifolium pratense HOM05D000219 ORTHO05D010276 4.0e-09 64.3 63 52.4
Phvul.004G136700 Phaseolus vulgaris HOM05D000219 ORTHO05D000226 5.2e-09 63.9 63 54.0
SHI50564 Sapria himalayana HOM05D000219 ORTHO05D010276 5.2e-09 63.9 40 80.0
BcaB07g29920 Brassica carinata HOM05D000219 ORTHO05D000226 6.8e-09 63.5 63 49.2
Hma1.2p1_0816F.1_g223010 Hydrangea macrophylla HOM05D000219 ORTHO05D000226 6.8e-09 63.5 63 50.8
Hma1.2p1_0816F.1_g223020 Hydrangea macrophylla HOM05D000219 ORTHO05D000226 6.8e-09 63.5 63 50.8
Medtr6g068930 Medicago truncatula HOM05D000219 ORTHO05D000226 6.8e-09 63.5 63 50.8
Nitab4.5_0000477g0170 Nicotiana tabacum HOM05D000219 ORTHO05D000226 6.8e-09 63.5 63 49.2
Nitab4.5_0010398g0010 Nicotiana tabacum HOM05D000219 ORTHO05D000226 6.8e-09 63.5 63 49.2
SHI29976 Sapria himalayana HOM05D014257 ORTHO05D006170 6.8e-09 63.5 41 75.6
VMungo0464G1361 Vigna mungo HOM05D000219 ORTHO05D000226 6.8e-09 63.5 63 52.4
ECA233G3819 Erigeron canadensis HOM05D000219 ORTHO05D000226 1.2e-08 62.8 63 47.6
Os02g0637700 Oryza sativa ssp. japonica HOM05D000219 ORTHO05D000226 1.2e-08 62.8 64 50.0
TPR.G31358 Trifolium pratense HOM05D000219 ORTHO05D000226 1.2e-08 62.8 63 50.8
Actinidia25675 Actinidia chinensis HOM05D000219 ORTHO05D010276 1.5e-08 62.4 62 53.2
Lj5A168T98 Lonicera japonica HOM05D000219 ORTHO05D000226 1.5e-08 62.4 63 49.2
Lalb_Chr22g0354051 Lupinus albus HOM05D000219 ORTHO05D000226 1.5e-08 62.4 63 52.4
CAN.G65.64 Capsicum annuum HOM05D000219 ORTHO05D000226 2.0e-08 62.0 63 49.2
MD14G1246800 Malus domestica HOM05D000219 ORTHO05D000226 2.0e-08 62.0 73 43.8
Rhsim12G0137400 Rhododendron simsii HOM05D000219 ORTHO05D000226 2.0e-08 62.0 63 47.6
Thecc.05G196900 Theobroma cacao HOM05D000219 ORTHO05D000226 2.0e-08 62.0 63 50.8
TAR636G0341 Trochodendron aralioides HOM05D000219 ORTHO05D000226 2.0e-08 62.0 63 52.4
Cpa.g.sc168.2 Carica papaya HOM05D000219 ORTHO05D000226 2.6e-08 61.6 63 50.8
CiPaw.15G107700 Carya illinoinensis HOM05D000219 ORTHO05D000226 2.6e-08 61.6 63 52.4
MBI03_g13437_MAGBIO Magnolia biondii HOM05D000219 ORTHO05D000226 2.6e-08 61.6 63 50.8
TWI36G1688 Tripterygium wilfordii HOM05D000219 ORTHO05D000226 2.6e-08 61.6 63 49.2
HanXRQChr12g0381231 Helianthus annuus HOM05D000219 ORTHO05D000226 3.4e-08 61.2 63 49.2
MBI03_g44526_MAGBIO Magnolia biondii HOM05D000219 ORTHO05D000226 3.4e-08 61.2 63 49.2
PSO063G5970 Papaver somniferum HOM05D000219 ORTHO05D000226 3.4e-08 61.2 63 50.8
Aa31LG11G3990 Aethionema arabicum HOM05D000219 ORTHO05D000226 4.4e-08 60.8 63 49.2
arahy.Tifrunner.gnm1.ann1.B2MH1M Arachis hypogaea HOM05D000219 ORTHO05D000226 4.4e-08 60.8 63 50.8
arahy.Tifrunner.gnm1.ann1.P0W1U8 Arachis hypogaea HOM05D000219 ORTHO05D000226 4.4e-08 60.8 63 50.8
COL.COLO4_05180 Corchorus olitorius HOM05D000219 ORTHO05D000226 4.4e-08 60.8 63 50.8
Duzib128G1276 Durio zibethinus HOM05D000219 ORTHO05D000226 4.4e-08 60.8 63 49.2
FvH4_5g18580 Fragaria vesca HOM05D000219 ORTHO05D000226 4.4e-08 60.8 63 49.2
FAN08G0809 Fragaria x ananassa HOM05D000219 ORTHO05D000226 4.4e-08 60.8 63 49.2
FAN18G2659 Fragaria x ananassa HOM05D000219 ORTHO05D000226 4.4e-08 60.8 63 49.2
Manes.02G226001 Manihot esculenta HOM05D000219 ORTHO05D000226 4.4e-08 60.8 63 50.8
Sc10g0006240 Simmondsia chinensis HOM05D000219 ORTHO05D000226 4.4e-08 60.8 72 44.4
CSS0027431 Camellia sinensis var. sinensis HOM05D000219 ORTHO05D000226 5.8e-08 60.5 63 47.6
CsaV3_1G007740 Cucumis sativus L. HOM05D000219 ORTHO05D000226 5.8e-08 60.5 63 47.6
Dinv03509 Davidia involucrata HOM05D000219 ORTHO05D000226 5.8e-08 60.5 63 47.6
SHI45727 Sapria himalayana HOM05D000219 ORTHO05D010276 7.5e-08 60.1 41 73.2
SHI50457 Sapria himalayana HOM05D000219 ORTHO05D010276 7.5e-08 60.1 42 71.4
Solyc06g072160.3 Solanum lycopersicum HOM05D000219 ORTHO05D000226 7.5e-08 60.1 63 49.2
Sopen06g028460 Solanum pennellii HOM05D000219 ORTHO05D000226 7.5e-08 60.1 63 49.2
Aqoxy1G01067 Aquilegia oxysepala HOM05D000219 ORTHO05D000226 9.8e-08 59.7 63 50.8
RcHm_v2.0_Chr7g0176931 Rosa chinensis HOM05D000219 ORTHO05D000226 9.8e-08 59.7 63 47.6
Lsat_1_v5_gn_5_65400 Lactuca sativa HOM05D000219 ORTHO05D000226 1.3e-07 59.3 63 46.0
PSO782G1609 Papaver somniferum HOM05D000219 ORTHO05D000226 1.3e-07 59.3 63 49.2
ClCG01G014590 Citrullus lanatus HOM05D000219 ORTHO05D000226 1.7e-07 58.9 63 46.0
Ciclev10020629m.g Citrus clementina HOM05D000219 ORTHO05D000226 1.7e-07 58.9 63 47.6
Migut.O00280 Erythranthe guttata HOM05D000219 ORTHO05D000226 1.7e-07 58.9 42 66.7
Gohir.D08G245900 Gossypium hirsutum HOM05D000219 ORTHO05D000226 1.7e-07 58.9 63 49.2
Gorai.004G262400 Gossypium raimondii HOM05D000219 ORTHO05D000226 1.7e-07 58.9 63 49.2
Peaxi162Scf00643g00536 Petunia axillaris HOM05D000219 ORTHO05D000226 1.7e-07 58.9 63 47.6
Atru.chr9.15 Acer truncatum HOM05D000219 ORTHO05D000226 2.2e-07 58.5 63 49.2
arahy.Tifrunner.gnm1.ann1.DB7K0S Arachis hypogaea HOM05D000219 ORTHO05D010276 2.2e-07 58.5 63 49.2
arahy.Tifrunner.gnm1.ann1.J4R23C Arachis hypogaea HOM05D000219 ORTHO05D010276 2.2e-07 58.5 63 49.2
MD06G1241000 Malus domestica HOM05D000219 ORTHO05D000226 2.2e-07 58.5 63 49.2
vmacro16403 Vaccinium macrocarpon HOM05D000219 ORTHO05D000226 2.2e-07 58.5 63 47.6
GSVIVG01024246001 Vitis vinifera HOM05D000219 ORTHO05D000226 2.2e-07 58.5 63 49.2
Zm00001eb185610 Zea mays HOM05D000219 ORTHO05D000226 2.2e-07 58.5 43 60.5
ATR0124G003 Amborella trichopoda HOM05D000219 ORTHO05D000226 2.9e-07 58.2 63 50.8
arahy.Tifrunner.gnm1.ann1.9I3Q6X Arachis hypogaea HOM05D000219 ORTHO05D010276 3.7e-07 57.8 63 47.6
Prupe.5G200700 Prunus persica HOM05D000219 ORTHO05D010276 3.7e-07 57.8 63 47.6
Prupe.5G245200 Prunus persica HOM05D000219 ORTHO05D000226 3.7e-07 57.8 63 46.0
Sed0015203 Sechium edule HOM05D000219 ORTHO05D000226 3.7e-07 57.8 63 46.0
MELO3C002189.2 Cucumis melo HOM05D000219 ORTHO05D000226 4.9e-07 57.4 63 44.4
HPP92_015003 Vanilla planifolia HOM05D000219 ORTHO05D000226 4.9e-07 57.4 63 49.2
arahy.Tifrunner.gnm1.ann1.HKZ3DM Arachis hypogaea HOM05D000219 ORTHO05D010276 6.4e-07 57.0 63 47.6
QL08p055124 Quercus lobata HOM05D000219 ORTHO05D000226 6.4e-07 57.0 63 46.0
CANSAT35G1028 Cannabis sativa HOM05D000219 ORTHO05D000226 8.3e-07 56.6 63 46.0
Prupe.6G022900 Prunus persica HOM05D000219 ORTHO05D000226 8.3e-07 56.6 42 61.9
arahy.Tifrunner.gnm1.ann1.W4Q01Q Arachis hypogaea HOM05D000219 ORTHO05D010276 1.4e-06 55.8 63 46.0
DCAR_023241 Daucus carota HOM05D000219 ORTHO05D000226 1.4e-06 55.8 42 54.8
Eucgr.K02333 Eucalyptus grandis HOM05D000219 ORTHO05D000226 1.9e-06 55.5 38 60.5
THA.LOC104798999 Tarenaya hassleriana HOM05D000219 ORTHO05D000226 1.9e-06 55.5 63 47.6
SHI36151 Sapria himalayana HOM05D014257 ORTHO05D006170 2.4e-06 55.1 33 84.8
FAN04G1983 Fragaria x ananassa HOM05D000219 ORTHO05D000226 3.2e-06 54.7 63 46.0
arahy.Tifrunner.gnm1.ann1.JNE1E7 Arachis hypogaea HOM05D000219 ORTHO05D010276 7.0e-06 53.5 63 44.4


User provided reference genes

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