Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI48237 Sapria himalayana HOM05D000076 ORTHO05D002916 2.9e-31 137.9 67 100.0
SHI41304 Sapria himalayana HOM05D000076 ORTHO05D369013 3.4e-16 87.8 41 100.0
SHI42226 Sapria himalayana HOM05D000076 ORTHO05D002916 2.9e-15 84.7 41 95.1
SHI42228 Sapria himalayana HOM05D000076 ORTHO05D002916 1.2e-13 79.3 40 90.0
SHI36163 Sapria himalayana HOM05D000076 ORTHO05D367138 2.1e-13 78.6 41 87.8
SHI14950 Sapria himalayana HOM05D000076 ORTHO05D002916 6.0e-13 77.0 40 87.5
Cfa017668 Carpinus fangiana HOM05D000076 ORTHO05D002916 5.3e-09 63.9 64 56.2
Haze_20483 Corylus avellana HOM05D000076 ORTHO05D002916 5.3e-09 63.9 64 56.2
Thecc.05G247600 Theobroma cacao HOM05D000076 ORTHO05D002916 1.5e-08 62.4 64 54.7
Prupe.7G006400 Prunus persica HOM05D000076 ORTHO05D002916 2.6e-08 61.6 64 53.1
MD12G1006300 Malus domestica HOM05D000076 ORTHO05D002916 3.4e-08 61.2 64 53.1
MD14G1003900 Malus domestica HOM05D000076 ORTHO05D002916 3.4e-08 61.2 64 53.1
Duzib128G0208 Durio zibethinus HOM05D000076 ORTHO05D002916 4.5e-08 60.8 64 51.6
TWI32G1262 Tripterygium wilfordii HOM05D000076 ORTHO05D002916 4.5e-08 60.8 64 50.0
TAR636G2623 Trochodendron aralioides HOM05D000076 ORTHO05D002916 4.5e-08 60.8 64 50.0
Ciclev10019212m.g Citrus clementina HOM05D000076 ORTHO05D002916 5.8e-08 60.5 64 51.6
Lj4C250G3 Lonicera japonica HOM05D000076 ORTHO05D002916 5.8e-08 60.5 40 62.5
Peaxi162Scf00591g00714 Petunia axillaris HOM05D000076 ORTHO05D002916 5.8e-08 60.5 63 50.8
MSTRG.25358 Avicennia marina HOM05D000076 ORTHO05D002916 7.6e-08 60.1 64 51.6
CANSAT11G1727 Cannabis sativa HOM05D000076 ORTHO05D002916 1.0e-07 59.7 40 62.5
CiPaw.10G126700 Carya illinoinensis HOM05D000076 ORTHO05D002916 1.0e-07 59.7 64 51.6
Dinv17146 Davidia involucrata HOM05D000076 ORTHO05D002916 1.0e-07 59.7 64 51.6
Manes.08G145700 Manihot esculenta HOM05D000076 ORTHO05D002916 1.0e-07 59.7 40 65.0
Potri.019G036600 Populus trichocarpa HOM05D000076 ORTHO05D002916 1.0e-07 59.7 66 51.5
Migut.C01067 Erythranthe guttata HOM05D000076 ORTHO05D002916 1.7e-07 58.9 64 48.4
Gohir.A08G218800 Gossypium hirsutum HOM05D000076 ORTHO05D002916 1.7e-07 58.9 64 50.0
Gohir.D08G235900 Gossypium hirsutum HOM05D000076 ORTHO05D002916 1.7e-07 58.9 64 50.0
Gorai.004G250700 Gossypium raimondii HOM05D000076 ORTHO05D002916 1.7e-07 58.9 64 50.0
Sabra19G0048100 Salix brachista HOM05D000076 ORTHO05D002916 1.7e-07 58.9 59 49.2
Dinv28267 Davidia involucrata HOM05D000076 ORTHO05D002916 2.2e-07 58.5 40 67.5
Gohir.A13G165400 Gossypium hirsutum HOM05D000076 ORTHO05D002916 2.2e-07 58.5 64 50.0
Gohir.D13G168400 Gossypium hirsutum HOM05D000076 ORTHO05D002916 2.2e-07 58.5 64 50.0
Gorai.013G193700 Gossypium raimondii HOM05D000076 ORTHO05D002916 2.2e-07 58.5 64 50.0
Lj5g0008397 Lotus japonicus HOM05D000076 ORTHO05D002916 2.2e-07 58.5 40 65.0
Lalb_Chr20g0112221 Lupinus albus HOM05D000076 ORTHO05D002916 2.2e-07 58.5 64 51.6
Manes.09G139700 Manihot esculenta HOM05D000076 ORTHO05D002916 2.2e-07 58.5 64 51.6
RcHm_v2.0_Chr3g0496781 Rosa chinensis HOM05D000076 ORTHO05D002916 2.2e-07 58.5 40 62.5
Solyc06g059980.3 Solanum lycopersicum HOM05D000076 ORTHO05D002916 2.2e-07 58.5 40 65.0
Sopen06g020080 Solanum pennellii HOM05D000076 ORTHO05D002916 2.2e-07 58.5 40 65.0
VMungo1309G0305 Vigna mungo HOM05D000076 ORTHO05D002916 2.2e-07 58.5 64 51.6
DCAR_003395 Daucus carota HOM05D000076 ORTHO05D002916 2.9e-07 58.2 40 65.0
Glyma.04G229200 Glycine max HOM05D000076 ORTHO05D002916 2.9e-07 58.2 64 50.0
Gohir.D11G244800 Gossypium hirsutum HOM05D000076 ORTHO05D002916 2.9e-07 58.2 40 62.5
Gorai.007G260400 Gossypium raimondii HOM05D000076 ORTHO05D002916 2.9e-07 58.2 40 62.5
Nitab4.5_0000418g0040 Nicotiana tabacum HOM05D000076 ORTHO05D002916 2.9e-07 58.2 40 65.0
TWI34G0718 Tripterygium wilfordii HOM05D000076 ORTHO05D002916 2.9e-07 58.2 64 46.9
SalBow7G1221 Salvia bowleyana HOM05D000076 ORTHO05D002916 3.8e-07 57.8 40 65.0
SalBow7G3057 Salvia bowleyana HOM05D000076 ORTHO05D002916 3.8e-07 57.8 40 65.0
Actinidia39899 Actinidia chinensis HOM05D000076 ORTHO05D002916 4.9e-07 57.4 40 62.5
Cpa.g.sc51.143 Carica papaya HOM05D000076 ORTHO05D002916 4.9e-07 57.4 40 65.0
FvH4_1g28330 Fragaria vesca HOM05D000076 ORTHO05D002916 4.9e-07 57.4 40 62.5
FAN23G0880 Fragaria x ananassa HOM05D000076 ORTHO05D002916 4.9e-07 57.4 40 62.5
FAN26G1506 Fragaria x ananassa HOM05D000076 ORTHO05D002916 4.9e-07 57.4 40 62.5
Dinv19093 Davidia involucrata HOM05D000076 ORTHO05D002916 6.5e-07 57.0 40 60.0
Glyma.06G135600 Glycine max HOM05D000076 ORTHO05D002916 6.5e-07 57.0 64 50.0
Potri.013G056200 Populus trichocarpa HOM05D000076 ORTHO05D002916 8.4e-07 56.6 64 48.4
Rhsim02G0037000 Rhododendron simsii HOM05D000076 ORTHO05D002916 8.4e-07 56.6 40 62.5
CSS0015655 Camellia sinensis var. sinensis HOM05D000076 ORTHO05D002916 1.1e-06 56.2 40 60.0
FAN19G2127 Fragaria x ananassa HOM05D000076 ORTHO05D002916 1.1e-06 56.2 40 60.0
CSS0016249 Camellia sinensis var. sinensis HOM05D000076 ORTHO05D002916 1.4e-06 55.8 40 60.0
FAN28G0693 Fragaria x ananassa HOM05D000076 ORTHO05D002916 1.4e-06 55.8 40 62.5
PSO478G0753 Papaver somniferum HOM05D000076 ORTHO05D002916 1.4e-06 55.8 64 45.3
TAR633G0673 Trochodendron aralioides HOM05D000076 ORTHO05D002916 1.4e-06 55.8 64 48.4
Lalb_Chr25g0288701 Lupinus albus HOM05D000076 ORTHO05D002916 1.9e-06 55.5 64 50.0
SGA_v2.0_scaffold24G10422 Striga asiatica HOM05D000076 ORTHO05D002916 1.9e-06 55.5 64 46.9
Cc10_g13780 Coffea canephora HOM05D000076 ORTHO05D002916 2.5e-06 55.1 40 60.0
Thhalv10020245m.g Eutrema salsugineum HOM05D000076 ORTHO05D002916 2.5e-06 55.1 40 60.0
Gohir.A11G233600 Gossypium hirsutum HOM05D000076 ORTHO05D002916 2.5e-06 55.1 40 57.5
Oeu015304.1 Olea europaea HOM05D000076 ORTHO05D002916 2.5e-06 55.1 64 48.4
vmacro15438 Vaccinium macrocarpon HOM05D000076 ORTHO05D002916 2.5e-06 55.1 40 57.5
A01p41300 Brassica napus HOM05D000076 ORTHO05D002916 3.2e-06 54.7 40 60.0
BNapus_Darmor_BZH_scaffold_78p00410 Brassica napus HOM05D000076 ORTHO05D002916 3.2e-06 54.7 40 60.0
BraA01t04554Z Brassica rapa HOM05D000076 ORTHO05D002916 3.2e-06 54.7 40 60.0
Carub.0003s0298 Capsella rubella HOM05D000076 ORTHO05D002916 3.2e-06 54.7 40 62.5
MELO3C026619.2 Cucumis melo HOM05D000076 ORTHO05D002916 3.2e-06 54.7 64 46.9
CsaV3_3G043120 Cucumis sativus L. HOM05D000076 ORTHO05D002916 3.2e-06 54.7 64 46.9
Medtr1g007390 Medicago truncatula HOM05D000076 ORTHO05D002916 3.2e-06 54.7 64 50.0
Medtr3g092590 Medicago truncatula HOM05D000076 ORTHO05D002916 3.2e-06 54.7 64 50.0
Nitab4.5_0005166g0040 Nicotiana tabacum HOM05D000076 ORTHO05D002916 3.2e-06 54.7 40 62.5
PSO782G5413 Papaver somniferum HOM05D000076 ORTHO05D002916 3.2e-06 54.7 40 57.5
Phvul.009G045900 Phaseolus vulgaris HOM05D000076 ORTHO05D002916 3.2e-06 54.7 64 50.0
TPR.G2869 Trifolium pratense HOM05D000076 ORTHO05D002916 3.2e-06 54.7 64 50.0
GSVIVG01016152001 Vitis vinifera HOM05D000076 ORTHO05D002916 4.2e-06 54.3 66 48.5
ECA246G2625 Erigeron canadensis HOM05D000076 ORTHO05D002916 5.5e-06 53.9 40 60.0
Sed0007012 Sechium edule HOM05D000076 ORTHO05D002916 5.5e-06 53.9 64 46.9
THA.LOC104802875 Tarenaya hassleriana HOM05D000076 ORTHO05D002916 5.5e-06 53.9 64 46.9
BolC1t05804H Brassica oleracea HOM05D000076 ORTHO05D002916 7.1e-06 53.5 40 57.5
CAN.G531.11 Capsicum annuum HOM05D000076 ORTHO05D002916 7.1e-06 53.5 39 59.0
Eucgr.F02920 Eucalyptus grandis HOM05D000076 ORTHO05D002916 7.1e-06 53.5 40 55.0
Sp3g02790 Schrenkiella parvula HOM05D000076 ORTHO05D002916 7.1e-06 53.5 40 57.5
Sed0028011 Sechium edule HOM05D000076 ORTHO05D002916 7.1e-06 53.5 64 46.9
THA.LOC104820779 Tarenaya hassleriana HOM05D000076 ORTHO05D002916 7.1e-06 53.5 64 46.9
Ah.06g191480 Amaranthus hybridus HOM05D000076 ORTHO05D002916 9.3e-06 53.1 40 62.5
EL10Ac4g08904 Beta vulgaris HOM05D000076 ORTHO05D002916 9.3e-06 53.1 40 60.0
Sabra13G0050000 Salix brachista HOM05D000076 ORTHO05D002916 9.3e-06 53.1 40 60.0


User provided reference genes

Program Settings