Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI48130 Sapria himalayana HOM05D000210 ORTHO05D005611 6.0e-112 407.5 205 100.0
SHI47592 Sapria himalayana HOM05D000210 ORTHO05D005611 9.6e-78 293.9 194 81.4
SHI48059 Sapria himalayana HOM05D000210 ORTHO05D005611 2.3e-55 219.5 149 79.2
SHI49438 Sapria himalayana HOM05D000210 ORTHO05D005611 1.5e-54 216.9 141 83.0
SHI47298 Sapria himalayana HOM05D000210 ORTHO05D005611 4.2e-49 198.7 141 78.7
SHI46659 Sapria himalayana HOM05D000210 ORTHO05D005611 3.9e-47 192.2 203 56.2
SHI35020 Sapria himalayana HOM05D000210 ORTHO05D005611 5.9e-43 178.3 210 52.4
SHI15997 Sapria himalayana HOM05D000210 ORTHO05D005611 3.2e-41 172.6 207 52.2
SHI37031 Sapria himalayana HOM05D000210 ORTHO05D005611 4.2e-41 172.2 168 59.5
SHI48588 Sapria himalayana HOM05D000210 ORTHO05D005611 1.1e-38 164.1 193 53.9
Cfa006073 Carpinus fangiana HOM05D000210 ORTHO05D005611 1.3e-37 160.6 208 48.6
SHI33437 Sapria himalayana HOM05D000210 ORTHO05D005611 8.2e-37 157.9 143 61.5
CANSAT25G2778 Cannabis sativa HOM05D000210 ORTHO05D005611 1.1e-36 157.5 214 45.3
Gorai.004G214900 Gossypium raimondii HOM05D000210 ORTHO05D005611 1.8e-36 156.8 209 45.5
MD11G1293000 Malus domestica HOM05D000210 ORTHO05D005611 1.8e-36 156.8 201 47.8
Thecc.01G286500 Theobroma cacao HOM05D000210 ORTHO05D005611 1.8e-36 156.8 203 46.3
Gohir.D08G202984 Gossypium hirsutum HOM05D000210 ORTHO05D005611 2.4e-36 156.4 211 45.5
Ciclev10019466m.g Citrus clementina HOM05D000210 ORTHO05D005611 5.3e-36 155.2 210 45.7
SHI48673 Sapria himalayana HOM05D000210 ORTHO05D005611 5.3e-36 155.2 187 50.8
CiPaw.07G096700 Carya illinoinensis HOM05D000210 ORTHO05D005611 1.2e-35 154.1 201 47.3
SHI48821 Sapria himalayana HOM05D000210 ORTHO05D005611 1.6e-35 153.7 185 52.4
Atru.chr5.1322 Acer truncatum HOM05D000210 ORTHO05D005611 2.0e-35 153.3 211 44.5
SHI49784 Sapria himalayana HOM05D000210 ORTHO05D005611 2.6e-35 152.9 118 68.6
Glyma.03G149400 Glycine max HOM05D000210 ORTHO05D005611 3.5e-35 152.5 206 46.1
Dinv11271 Davidia involucrata HOM05D000210 ORTHO05D005611 4.5e-35 152.1 210 45.7
FvH4_2g24250 Fragaria vesca HOM05D000210 ORTHO05D005611 5.9e-35 151.8 201 45.8
Prupe.8G248400 Prunus persica HOM05D000210 ORTHO05D005611 5.9e-35 151.8 201 45.3
RcHm_v2.0_Chr6g0292061 Rosa chinensis HOM05D000210 ORTHO05D005611 5.9e-35 151.8 201 45.3
SHI06055 Sapria himalayana HOM05D000210 ORTHO05D005611 5.9e-35 151.8 118 68.6
GSVIVG01011052001 Vitis vinifera HOM05D000210 ORTHO05D005611 7.7e-35 151.4 205 44.9
FAN15G3364 Fragaria x ananassa HOM05D000210 ORTHO05D005611 1.0e-34 151.0 201 45.8
Duzib138G1044 Durio zibethinus HOM05D000210 ORTHO05D005611 1.7e-34 150.2 206 45.6
TAR633G2129 Trochodendron aralioides HOM05D000210 ORTHO05D005611 1.7e-34 150.2 209 44.5
FAN24G2823 Fragaria x ananassa HOM05D000210 ORTHO05D005611 2.2e-34 149.8 201 45.3
QL12p023065 Quercus lobata HOM05D000210 ORTHO05D005611 2.2e-34 149.8 211 43.1
SHI45120 Sapria himalayana HOM05D000210 ORTHO05D005611 2.2e-34 149.8 221 49.3
Lj1g0017777 Lotus japonicus HOM05D000210 ORTHO05D005611 3.8e-34 149.1 203 44.3
TPR.G32800 Trifolium pratense HOM05D000210 ORTHO05D005611 5.0e-34 148.7 200 43.5
arahy.Tifrunner.gnm1.ann1.2F1JWB Arachis hypogaea HOM05D002837 ORTHO05D005611 1.5e-33 147.1 203 44.8
Ah.08g212840 Amaranthus hybridus HOM05D000210 ORTHO05D005611 2.5e-33 146.4 202 45.0
Phvul.001G147300 Phaseolus vulgaris HOM05D000210 ORTHO05D005611 3.2e-33 146.0 201 45.8
Potri.014G136800 Populus trichocarpa HOM05D000210 ORTHO05D005611 3.2e-33 146.0 210 43.3
vmacro14947 Vaccinium macrocarpon HOM05D000210 ORTHO05D005611 3.2e-33 146.0 204 45.1
SHI37736 Sapria himalayana HOM05D000210 ORTHO05D005611 5.5e-33 145.2 109 69.7
SHI38641 Sapria himalayana HOM05D000210 ORTHO05D005611 2.7e-32 142.9 143 59.4
Sabra14G0103200 Salix brachista HOM05D000210 ORTHO05D005611 3.6e-32 142.5 210 42.4
Psat3g066840 Pisum sativum HOM05D000210 ORTHO05D005611 6.1e-32 141.7 202 44.6
Medtr7g094190 Medicago truncatula HOM05D000210 ORTHO05D005611 8.0e-32 141.4 202 44.6
Eucgr.K03410 Eucalyptus grandis HOM05D000210 ORTHO05D005611 1.0e-31 141.0 202 42.6
Nn4g26117 Nelumbo nucifera HOM05D000210 ORTHO05D005611 1.0e-31 141.0 203 43.8
VMungo1383G3377 Vigna mungo HOM05D000210 ORTHO05D005611 1.0e-31 141.0 201 44.3
arahy.Tifrunner.gnm1.ann1.11MVEE Arachis hypogaea HOM05D000210 ORTHO05D005611 5.2e-31 138.7 202 41.6
SHI50213 Sapria himalayana HOM05D000210 ORTHO05D005611 5.2e-31 138.7 181 50.8
Hund05363 Selenicereus undatus HOM05D000210 ORTHO05D005611 5.2e-31 138.7 222 39.2
arahy.Tifrunner.gnm1.ann1.CG37GB Arachis hypogaea HOM05D000210 ORTHO05D005611 1.2e-30 137.5 202 41.1
Lj1C42G11 Lonicera japonica HOM05D000210 ORTHO05D005611 1.2e-30 137.5 203 42.4
SHI35107 Sapria himalayana HOM05D000210 ORTHO05D005611 1.5e-30 137.1 198 44.4
CSS0026102 Camellia sinensis var. sinensis HOM05D000210 ORTHO05D005611 2.0e-30 136.7 205 42.4
Actinidia21087 Actinidia chinensis HOM05D000210 ORTHO05D005611 2.6e-30 136.3 209 43.5
SHI01933 Sapria himalayana HOM05D000210 ORTHO05D005611 4.4e-30 135.6 163 50.3
SHI37091 Sapria himalayana HOM05D000210 ORTHO05D005611 5.7e-30 135.2 205 44.4
CDE09G1445 Ceratophyllum demersum HOM05D000210 ORTHO05D005611 9.7e-30 134.4 200 41.5
SHI40250 Sapria himalayana HOM05D000210 ORTHO05D005611 9.7e-30 134.4 143 57.3
AUR62034578 Chenopodium quinoa HOM05D000210 ORTHO05D005611 3.7e-29 132.5 215 41.9
CSS0038921 Camellia sinensis var. sinensis HOM05D000210 ORTHO05D005611 2.4e-28 129.8 205 41.5
SEGI_08565 Sequoiadendron giganteum HOM05D000210 ORTHO05D005611 5.0e-26 122.1 197 38.6
SHI25127 Sapria himalayana HOM05D000210 ORTHO05D037534 7.2e-25 118.2 80 73.8
arahy.Tifrunner.gnm1.ann1.Q48K4T Arachis hypogaea HOM05D002837 ORTHO05D005611 1.4e-23 114.0 153 45.8
SHI03543 Sapria himalayana HOM05D000210 ORTHO05D005611 1.4e-23 114.0 80 71.2
Haze_04777 Corylus avellana HOM05D000210 ORTHO05D005611 3.0e-23 112.8 208 38.0
SHI28943 Sapria himalayana HOM05D000210 ORTHO05D005611 4.4e-22 109.0 98 59.2
Eucgr.K03411 Eucalyptus grandis HOM05D000210 ORTHO05D005611 2.8e-21 106.3 224 37.1
CSS0008686 Camellia sinensis var. sinensis HOM05D000210 ORTHO05D005611 5.4e-20 102.1 151 41.1
SHI53918 Sapria himalayana HOM05D000210 ORTHO05D005611 1.6e-19 100.5 65 76.9
SHI38773 Sapria himalayana HOM05D000210 ORTHO05D005611 2.7e-19 99.8 140 48.6
SHI49976 Sapria himalayana HOM05D000210 ORTHO05D005611 1.2e-16 90.9 49 85.7
SHI51201 Sapria himalayana HOM05D000210 ORTHO05D005611 3.6e-16 89.4 60 75.0
SHI45297 Sapria himalayana HOM05D000210 ORTHO05D005611 1.8e-15 87.0 60 73.3
Medtr7g094330 Medicago truncatula HOM05D000210 ORTHO05D005611 6.8e-15 85.1 137 40.9
MSTRG.21588 Avicennia marina HOM05D000210 ORTHO05D005611 1.2e-14 84.3 100 45.0
SHI48848 Sapria himalayana HOM05D000210 ORTHO05D005611 4.4e-14 82.4 67 58.2
SHI50973 Sapria himalayana HOM05D000210 ORTHO05D005611 4.4e-14 82.4 60 71.7
SHI51420 Sapria himalayana HOM05D000210 ORTHO05D005611 5.7e-14 82.0 204 34.8
SHI28942 Sapria himalayana HOM05D000210 ORTHO05D037534 7.5e-14 81.6 81 60.5
COL.COLO4_09151 Corchorus olitorius HOM05D000210 ORTHO05D005611 9.8e-14 81.3 200 32.0
MBI17_g12076_MAGBIO Magnolia biondii HOM05D000210 ORTHO05D005611 1.7e-13 80.5 196 32.7
SHI06053 Sapria himalayana HOM05D000105 ORTHO05D000023 3.7e-13 79.3 53 66.0
Cpa.g.sc9.135 Carica papaya HOM05D000210 ORTHO05D005611 4.9e-13 79.0 75 57.3
SHI30997 Sapria himalayana HOM05D000210 ORTHO05D005611 4.9e-13 79.0 46 73.9
Ca_08554_v3 Cicer arietinum L. HOM05D000210 ORTHO05D005611 6.3e-13 78.6 186 31.7
Ca_08588_v3 Cicer arietinum L. HOM05D000210 ORTHO05D005611 6.3e-13 78.6 186 31.7
SHI51828 Sapria himalayana HOM05D000210 ORTHO05D005611 6.3e-13 78.6 60 68.3
SHI52129 Sapria himalayana HOM05D000210 ORTHO05D005611 6.3e-13 78.6 60 68.3
SHI32945 Sapria himalayana HOM05D000210 ORTHO05D005611 1.1e-12 77.8 204 33.3
SHI50019 Sapria himalayana HOM05D000210 ORTHO05D005611 4.1e-12 75.9 137 40.9
SHI42430 Sapria himalayana HOM05D000210 ORTHO05D005611 5.4e-12 75.5 48 72.9
SHI35778 Sapria himalayana HOM05D000210 ORTHO05D005611 1.0e-10 71.2 85 54.1
SHI38302 Sapria himalayana HOM05D000210 ORTHO05D005611 2.3e-10 70.1 99 46.5
SHI50845 Sapria himalayana HOM05D000210 ORTHO05D005611 2.3e-10 70.1 38 81.6
SHI37216 Sapria himalayana HOM05D000210 ORTHO05D005611 2.9e-10 69.7 67 56.7
Os05g0143800 Oryza sativa ssp. japonica HOM05D000210 ORTHO05D005611 5.0e-10 68.9 104 36.5
SHI52541 Sapria himalayana HOM05D000210 ORTHO05D005611 8.6e-10 68.2 39 76.9
SHI25126 Sapria himalayana HOM05D000210 ORTHO05D005611 1.1e-09 67.8 48 72.9
Actinidia24867 Actinidia chinensis HOM05D000210 ORTHO05D005611 2.5e-09 66.6 107 39.3
Gohir.A08G184800 Gossypium hirsutum HOM05D000210 ORTHO05D005611 2.5e-09 66.6 48 62.5
MELO3C008672.2 Cucumis melo HOM05D000210 ORTHO05D000247 5.6e-09 65.5 198 26.3
CsaV3_2G010160 Cucumis sativus L. HOM05D000210 ORTHO05D000247 7.3e-09 65.1 196 27.6
AagrBONN_evm.TU.Sc2ySwM_344.1107 Anthoceros agrestis HOM05D000210 ORTHO05D001446 9.5e-09 64.7 202 26.2
SHI25125 Sapria himalayana HOM05D000210 ORTHO05D005611 3.6e-08 62.8 36 75.0
ECA234G1578 Erigeron canadensis HOM05D000210 ORTHO05D001446 4.7e-08 62.4 200 27.0
Manes.01G211600 Manihot esculenta HOM05D000210 ORTHO05D005611 8.0e-08 61.6 79 43.0
Medtr8g027965 Medicago truncatula HOM05D000210 ORTHO05D001446 8.0e-08 61.6 199 27.6
SHI36274 Sapria himalayana HOM05D000210 ORTHO05D005611 8.0e-08 61.6 36 75.0
SMO364G0213 Selaginella moellendorffii HOM05D000210 ORTHO05D005611 1.8e-07 60.5 193 26.9
AagrBONN_evm.TU.Sc2ySwM_344.1105 Anthoceros agrestis HOM05D000210 ORTHO05D000247 2.3e-07 60.1 202 27.2
SHI35779 Sapria himalayana HOM05D000210 ORTHO05D005611 2.3e-07 60.1 35 77.1
TWI75G1579 Tripterygium wilfordii HOM05D000210 ORTHO05D000247 3.0e-07 59.7 201 27.9
Hma1.2p1_0384F.1_g141130 Hydrangea macrophylla HOM05D000210 ORTHO05D001446 4.0e-07 59.3 199 26.6
Lalb_Chr10g0100281 Lupinus albus HOM05D000210 ORTHO05D001446 4.0e-07 59.3 199 25.1
SMO367G1040 Selaginella moellendorffii HOM05D000210 ORTHO05D000247 5.2e-07 58.9 190 27.9
Zm00001eb119720 Zea mays HOM05D000210 ORTHO05D001446 6.8e-07 58.5 199 27.1
Sed0018928 Sechium edule HOM05D000210 ORTHO05D000247 8.9e-07 58.2 197 27.4
A05p18760 Brassica napus HOM05D000210 ORTHO05D000247 1.2e-06 57.8 199 26.1
BraA05t20773Z Brassica rapa HOM05D000210 ORTHO05D000247 1.2e-06 57.8 199 26.1
Medtr8g027920 Medicago truncatula HOM05D000210 ORTHO05D001446 1.2e-06 57.8 199 26.1
Peaxi162Scf01012g00020 Petunia axillaris HOM05D000210 ORTHO05D001446 1.2e-06 57.8 199 26.1
SMO367G0764 Selaginella moellendorffii HOM05D000210 ORTHO05D000247 1.2e-06 57.8 190 26.8
Nitab4.5_0000522g0190 Nicotiana tabacum HOM05D000210 ORTHO05D001446 1.5e-06 57.4 199 24.1
RcHm_v2.0_Chr1g0358981 Rosa chinensis HOM05D000210 ORTHO05D001446 1.5e-06 57.4 199 26.1
SMO275G0020 Selaginella moellendorffii HOM05D000210 ORTHO05D000247 1.5e-06 57.4 190 26.8
AagrBONN_evm.TU.Sc2ySwM_344.1104 Anthoceros agrestis HOM05D000210 ORTHO05D001446 2.0e-06 57.0 202 25.2
SMO319G0002 Selaginella moellendorffii HOM05D000210 ORTHO05D005611 2.6e-06 56.6 194 25.8
Sopen10g005440 Solanum pennellii HOM05D000210 ORTHO05D001446 2.6e-06 56.6 199 22.6
CsaV3_6G012660 Cucumis sativus L. HOM05D000210 ORTHO05D000247 3.4e-06 56.2 204 27.9
Duzib138G1601 Durio zibethinus HOM05D000210 ORTHO05D001446 3.4e-06 56.2 199 24.6
SMO364G0031 Selaginella moellendorffii HOM05D000210 ORTHO05D005611 3.4e-06 56.2 198 28.8
A06p04240 Brassica napus HOM05D000210 ORTHO05D000247 4.4e-06 55.8 189 27.5
Migut.N01563 Erythranthe guttata HOM05D000210 ORTHO05D001446 4.4e-06 55.8 200 24.5
BraA06t23627Z Brassica rapa HOM05D000210 ORTHO05D000247 7.5e-06 55.1 189 27.5
Ciclev10019459m.g Citrus clementina HOM05D000210 ORTHO05D001446 9.8e-06 54.7 199 25.1
Nitab4.5_0001084g0020 Nicotiana tabacum HOM05D000210 ORTHO05D001446 9.8e-06 54.7 199 23.1
Psat4g159880 Pisum sativum HOM05D000210 ORTHO05D001446 9.8e-06 54.7 199 25.1
Prupe.2G184100 Prunus persica HOM05D000210 ORTHO05D001446 9.8e-06 54.7 199 24.1
TPR.G33110 Trifolium pratense HOM05D000210 ORTHO05D000247 9.8e-06 54.7 200 26.5


User provided reference genes

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