Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI47273 Sapria himalayana HOM05D004911 ORTHO05D005930 2.1e-307 1058.1 516 100.0
SHI50333 Sapria himalayana HOM05D004911 ORTHO05D005930 3.3e-191 672.2 451 78.7
SHI04173 Sapria himalayana HOM05D004911 ORTHO05D005930 5.3e-141 505.4 887 40.0
SHI42568 Sapria himalayana HOM05D004911 ORTHO05D005930 4.2e-138 495.7 421 65.6
SHI34912 Sapria himalayana HOM05D004911 ORTHO05D005930 1.4e-130 470.7 434 61.8
SHI45395 Sapria himalayana HOM05D004911 ORTHO05D005930 2.4e-117 426.8 326 69.9
SHI45716 Sapria himalayana HOM05D004911 ORTHO05D005930 2.4e-117 426.8 326 69.9
SHI53748 Sapria himalayana HOM05D004911 ORTHO05D005930 4.5e-84 316.2 170 92.9
vmacro16011 Vaccinium macrocarpon HOM05D004911 ORTHO05D005930 6.8e-72 275.8 425 38.8
SHI39004 Sapria himalayana HOM05D004911 ORTHO05D005930 4.9e-70 269.6 146 93.8
SHI42567 Sapria himalayana HOM05D004911 ORTHO05D005930 4.9e-70 269.6 156 89.7
Manes.03G080800 Manihot esculenta HOM05D004911 ORTHO05D005930 1.4e-69 268.1 482 36.3
Cpa.g.sc63.15 Carica papaya HOM05D004911 ORTHO05D005930 1.9e-69 267.7 476 37.0
Gohir.A04G143200 Gossypium hirsutum HOM05D004911 ORTHO05D005930 3.5e-68 263.5 475 37.3
Gorai.012G182900 Gossypium raimondii HOM05D004911 ORTHO05D005930 3.5e-68 263.5 475 37.5
Potri.008G085300 Populus trichocarpa HOM05D004911 ORTHO05D005930 4.6e-68 263.1 485 35.5
Duzib251G0593 Durio zibethinus HOM05D004911 ORTHO05D005930 6.0e-68 262.7 482 35.3
Atru.chr11.1224 Acer truncatum HOM05D004911 ORTHO05D005930 1.3e-67 261.5 482 36.1
Gohir.D04G186500 Gossypium hirsutum HOM05D004911 ORTHO05D005930 3.0e-67 260.4 475 37.3
SHI34911 Sapria himalayana HOM05D004911 ORTHO05D005930 3.9e-67 260.0 155 84.5
TWI53G1120 Tripterygium wilfordii HOM05D004911 ORTHO05D005930 3.9e-67 260.0 482 35.1
Actinidia04316 Actinidia chinensis HOM05D004911 ORTHO05D005930 1.1e-66 258.5 487 34.1
Sabra08G0063200 Salix brachista HOM05D004911 ORTHO05D005930 1.9e-66 257.7 500 35.0
CANSAT56G0121 Cannabis sativa HOM05D004911 ORTHO05D005930 2.5e-66 257.3 481 35.3
Thecc.02G295700 Theobroma cacao HOM05D004911 ORTHO05D005930 2.8e-65 253.8 483 34.8
Ciclev10030563m.g Citrus clementina HOM05D004911 ORTHO05D005930 1.1e-64 251.9 482 35.1
COL.COLO4_16624 Corchorus olitorius HOM05D004911 ORTHO05D005930 3.1e-64 250.4 406 39.7
Cfa008718 Carpinus fangiana HOM05D004911 ORTHO05D005930 6.8e-64 249.2 486 35.6
ClCG01G007110 Citrullus lanatus HOM05D004911 ORTHO05D005930 1.5e-63 248.1 482 34.9
Dinv12051 Davidia involucrata HOM05D004911 ORTHO05D005930 1.5e-63 248.1 524 32.4
Sed0025480 Sechium edule HOM05D004911 ORTHO05D005930 2.6e-63 247.3 480 34.6
FvH4_7g19060 Fragaria vesca HOM05D004911 ORTHO05D005930 3.4e-63 246.9 481 34.9
Lj3C852G13 Lonicera japonica HOM05D004911 ORTHO05D005930 3.4e-63 246.9 485 33.0
RcHm_v2.0_Chr1g0362961 Rosa chinensis HOM05D004911 ORTHO05D005930 3.4e-63 246.9 481 34.9
CSS0020868 Camellia sinensis var. sinensis HOM05D004911 ORTHO05D005930 4.4e-63 246.5 484 33.5
MELO3C005202.2 Cucumis melo HOM05D004911 ORTHO05D005930 5.8e-63 246.1 480 34.4
Rhsim09G0072200 Rhododendron simsii HOM05D004911 ORTHO05D005930 7.5e-63 245.7 488 33.2
FAN03G1024 Fragaria x ananassa HOM05D004911 ORTHO05D005930 1.7e-62 244.6 481 34.7
FAN06G1517 Fragaria x ananassa HOM05D004911 ORTHO05D005930 1.7e-62 244.6 481 34.7
CsaV3_5G017560 Cucumis sativus L. HOM05D004911 ORTHO05D005930 2.2e-62 244.2 480 34.4
FAN06G4750 Fragaria x ananassa HOM05D004911 ORTHO05D005930 2.2e-62 244.2 481 34.7
MD07G1172300 Malus domestica HOM05D004911 ORTHO05D005930 2.2e-62 244.2 483 33.5
FAN10G0928 Fragaria x ananassa HOM05D004911 ORTHO05D005930 3.7e-62 243.4 481 34.7
FAN10G1537 Fragaria x ananassa HOM05D004911 ORTHO05D005930 3.7e-62 243.4 481 34.7
MD01G1105900 Malus domestica HOM05D004911 ORTHO05D005930 8.3e-62 242.3 483 33.7
Aqoxy3G04281 Aquilegia oxysepala HOM05D004911 ORTHO05D005930 1.1e-61 241.9 486 34.6
FAN01G1211 Fragaria x ananassa HOM05D004911 ORTHO05D005930 1.4e-61 241.5 483 34.2
PGR044G1924 Punica granatum HOM05D004911 ORTHO05D005930 1.2e-60 238.4 476 33.8
Prupe.2G211300 Prunus persica HOM05D004911 ORTHO05D005930 1.0e-59 235.3 482 33.2
SHI49274 Sapria himalayana HOM05D004911 ORTHO05D005930 1.7e-59 234.6 496 36.9
GSVIVG01010210001 Vitis vinifera HOM05D004911 ORTHO05D005930 1.7e-59 234.6 485 31.5
Glyma.12G027900 Glycine max HOM05D004911 ORTHO05D005930 8.6e-59 232.3 473 33.2
Hma1.2p1_0183F.1_g081050 Hydrangea macrophylla HOM05D004911 ORTHO05D005930 1.1e-58 231.9 491 32.2
arahy.Tifrunner.gnm1.ann1.Q7DFN3 Arachis hypogaea HOM05D004911 ORTHO05D005930 2.5e-58 230.7 484 33.1
Haze_11729 Corylus avellana HOM05D004911 ORTHO05D005930 5.6e-58 229.6 469 35.0
Lj3g0004396 Lotus japonicus HOM05D004911 ORTHO05D005930 7.3e-58 229.2 483 32.9
Glyma.11G102800 Glycine max HOM05D004911 ORTHO05D005930 9.5e-58 228.8 472 32.8
Nn3g18681 Nelumbo nucifera HOM05D004911 ORTHO05D005930 1.2e-57 228.4 488 32.0
VMungo1215G1051 Vigna mungo HOM05D004911 ORTHO05D005930 1.6e-57 228.0 473 32.6
Ca_25607_v3 Cicer arietinum L. HOM05D004911 ORTHO05D005930 4.7e-57 226.5 491 33.0
Psat7g173880 Pisum sativum HOM05D004911 ORTHO05D005930 6.2e-57 226.1 488 33.2
PSO063G3537 Papaver somniferum HOM05D004911 ORTHO05D005930 8.1e-57 225.7 530 30.4
TPR.G32325 Trifolium pratense HOM05D004911 ORTHO05D005930 1.1e-56 225.3 486 32.7
EL10Ac9g22915 Beta vulgaris HOM05D004911 ORTHO05D005930 4.0e-56 223.4 485 31.3
SHI39005 Sapria himalayana HOM05D004911 ORTHO05D005930 1.7e-54 218.0 116 90.5
CARHR095390 Cardamine hirsuta HOM05D004911 ORTHO05D005930 2.9e-54 217.2 475 30.9
PSO782G1502 Papaver somniferum HOM05D004911 ORTHO05D005930 4.9e-54 216.5 492 31.3
Medtr4g074460 Medicago truncatula HOM05D004911 ORTHO05D005930 8.4e-54 215.7 479 32.2
SHI39007 Sapria himalayana HOM05D004911 ORTHO05D005930 1.4e-53 214.9 177 65.0
Carub.0003s1976 Capsella rubella HOM05D004911 ORTHO05D005930 2.4e-53 214.2 475 30.7
AT3G19870 Arabidopsis thaliana HOM05D004911 ORTHO05D005930 5.4e-53 213.0 475 30.7
AL3G33410 Arabidopsis lyrata HOM05D004911 ORTHO05D005930 1.6e-52 211.5 475 30.7
AUR62015197 Chenopodium quinoa HOM05D004911 ORTHO05D005930 2.1e-52 211.1 482 31.1
MBI03_g33919_MAGBIO Magnolia biondii HOM05D004911 ORTHO05D005930 3.5e-52 210.3 481 31.0
Ah.01g001680 Amaranthus hybridus HOM05D004911 ORTHO05D005930 7.8e-52 209.1 496 31.0
Hund08529 Selenicereus undatus HOM05D004911 ORTHO05D005930 3.0e-51 207.2 487 31.0
Sp3g17890 Schrenkiella parvula HOM05D004911 ORTHO05D005930 8.7e-51 205.7 477 29.8
DCAR_023433 Daucus carota HOM05D004911 ORTHO05D005930 1.1e-50 205.3 427 34.7
Thhalv10019942m.g Eutrema salsugineum HOM05D004911 ORTHO05D005930 2.5e-50 204.1 477 30.0
Aa31LG8G6640 Aethionema arabicum HOM05D004911 ORTHO05D005930 7.3e-50 202.6 475 29.5
BcaC09g48939 Brassica carinata HOM05D004911 ORTHO05D005930 1.3e-49 201.8 462 30.3
A01p34870 Brassica napus HOM05D004911 ORTHO05D005930 6.2e-49 199.5 472 30.1
C01p44300 Brassica napus HOM05D004911 ORTHO05D005930 1.8e-48 198.0 473 29.6
BolC1t04393H Brassica oleracea HOM05D004911 ORTHO05D005930 1.8e-48 198.0 473 29.6
BraA01t03570Z Brassica rapa HOM05D004911 ORTHO05D005930 3.1e-48 197.2 472 29.7
SHI51106 Sapria himalayana HOM05D004911 ORTHO05D005930 5.3e-48 196.4 110 85.5
Migut.H02310 Erythranthe guttata HOM05D004911 ORTHO05D005930 1.2e-47 195.3 492 30.1
Lsat_1_v5_gn_0_9321 Lactuca sativa HOM05D004911 ORTHO05D005930 3.4e-47 193.7 487 28.5
SalBow2G3529 Salvia bowleyana HOM05D004911 ORTHO05D005930 3.4e-47 193.7 488 29.5
Solyc10g079850.2 Solanum lycopersicum HOM05D004911 ORTHO05D005930 3.4e-47 193.7 481 29.9
Lalb_Chr19g0139351 Lupinus albus HOM05D004911 ORTHO05D005930 4.4e-47 193.4 480 30.2
THA.LOC104809147 Tarenaya hassleriana HOM05D004911 ORTHO05D005930 4.4e-47 193.4 475 29.1
Sopen10g030460 Solanum pennellii HOM05D004911 ORTHO05D005930 5.8e-47 193.0 481 29.7
PGSC0003DMG400029831 Solanum tuberosum HOM05D004911 ORTHO05D005930 5.8e-47 193.0 481 29.7
MSTRG.8077 Avicennia marina HOM05D004911 ORTHO05D005930 3.8e-46 190.3 489 30.1
ATR0564G294 Amborella trichopoda HOM05D004911 ORTHO05D005930 1.1e-45 188.7 513 28.8
Nitab4.5_0000562g0030 Nicotiana tabacum HOM05D004911 ORTHO05D005930 3.2e-45 187.2 481 28.7
Peaxi162Scf01315g00114 Petunia axillaris HOM05D004911 ORTHO05D005930 4.2e-45 186.8 483 28.6
SGA_v2.0_scaffold80G25956 Striga asiatica HOM05D004911 ORTHO05D005930 4.6e-44 183.3 487 29.2
Nitab4.5_0000677g0060 Nicotiana tabacum HOM05D004911 ORTHO05D005930 7.8e-44 182.6 481 28.5
HanXRQChr06g0175521 Helianthus annuus HOM05D004911 ORTHO05D005930 2.3e-43 181.0 481 28.3
ECA246G1490 Erigeron canadensis HOM05D004911 ORTHO05D005930 5.1e-43 179.9 490 28.2
CiPaw.05G166500 Carya illinoinensis HOM05D004911 ORTHO05D005930 1.5e-42 178.3 171 53.2
CAN.G1656.8 Capsicum annuum HOM05D004911 ORTHO05D005930 7.3e-42 176.0 483 28.4
unitig_22.g6363 Utricularia gibba HOM05D004911 ORTHO05D005930 6.2e-41 172.9 486 26.5
CiPaw.05G166600 Carya illinoinensis HOM05D004911 ORTHO05D005930 2.4e-40 171.0 136 61.8
Hma1.2p1_0183F.1_g081060 Hydrangea macrophylla HOM05D004911 ORTHO05D005930 4.5e-39 166.8 135 59.3
Sc06g0007820 Simmondsia chinensis HOM05D004911 ORTHO05D005930 1.3e-38 165.2 466 29.6
QL03p043438 Quercus lobata HOM05D004911 ORTHO05D005930 2.2e-38 164.5 133 58.6
QL03p043434 Quercus lobata HOM05D004911 ORTHO05D005930 4.9e-38 163.3 174 48.9
Eucgr.J00848 Eucalyptus grandis HOM05D004911 ORTHO05D005930 2.7e-36 157.5 142 53.5
TAR371G0490 Trochodendron aralioides HOM05D004911 ORTHO05D005930 1.1e-34 152.1 171 45.0
SHI50603 Sapria himalayana HOM05D004911 ORTHO05D005930 1.5e-34 151.8 137 59.1
Oeu056145.2 Olea europaea HOM05D004911 ORTHO05D005930 3.7e-33 147.1 139 51.8
CDE05G0535 Ceratophyllum demersum HOM05D004911 ORTHO05D005930 4.0e-32 143.7 175 44.0
Cc07_g19490 Coffea canephora HOM05D004911 ORTHO05D005930 4.0e-32 143.7 497 26.0
AUR62017660 Chenopodium quinoa HOM05D004911 ORTHO05D005930 6.9e-32 142.9 134 53.0
SHI45052 Sapria himalayana HOM05D004911 ORTHO05D005930 3.4e-31 140.6 131 57.3
HPP92_012853 Vanilla planifolia HOM05D004911 ORTHO05D005930 5.8e-31 139.8 145 46.9
SMO367G0101 Selaginella moellendorffii HOM05D004911 ORTHO05D005930 8.4e-30 136.0 503 24.7
Mapoly0023s0169 Marchantia polymorpha HOM05D004911 ORTHO05D005930 2.5e-29 134.4 495 25.1
Os02g0829400 Oryza sativa ssp. japonica HOM05D004911 ORTHO05D005930 8.7e-27 125.9 478 24.1
SHI38855 Sapria himalayana HOM05D004911 ORTHO05D005930 1.1e-26 125.6 192 44.8
SHI53022 Sapria himalayana HOM05D004911 ORTHO05D005930 7.4e-26 122.9 68 94.1
SHI45396 Sapria himalayana HOM05D004911 ORTHO05D005930 2.4e-24 117.9 169 43.8
SHI45717 Sapria himalayana HOM05D004911 ORTHO05D005930 2.4e-24 117.9 169 43.8
Pp3c23_5970 Physcomitrium patens HOM05D004911 ORTHO05D005930 4.0e-24 117.1 506 23.5
Zm00001eb259390 Zea mays HOM05D004911 ORTHO05D005930 2.6e-23 114.4 132 43.2
SHI00990 Sapria himalayana HOM05D000360 ORTHO05D000234 1.2e-20 105.5 66 75.8
SHI52879 Sapria himalayana HOM05D004911 ORTHO05D005930 4.6e-20 103.6 57 86.0
SHI47080 Sapria himalayana HOM05D004911 ORTHO05D005930 1.8e-19 101.7 53 88.7
AagrBONN_evm.TU.Sc2ySwM_228.3553 Anthoceros agrestis HOM05D004911 ORTHO05D005930 1.1e-18 99.0 187 34.2
HPP92_012844 Vanilla planifolia HOM05D004911 ORTHO05D005930 8.2e-17 92.8 134 38.8
VMungo0251G2567 Vigna mungo HOM05D004911 ORTHO05D018492 5.9e-15 86.7 79 54.4
SHI49910 Sapria himalayana HOM05D000360 ORTHO05D003030 3.2e-13 80.9 40 92.5
SHI38853 Sapria himalayana HOM05D004911 ORTHO05D005930 1.0e-11 75.9 53 73.6
TAR371G0035 Trochodendron aralioides HOM05D004911 ORTHO05D005930 9.7e-10 69.3 58 55.2
SHI34648 Sapria himalayana HOM05D002853 ORTHO05D003030 6.3e-09 66.6 44 70.5
Phvul.002G058701 Phaseolus vulgaris HOM05D004911 ORTHO05D005930 1.8e-08 65.1 51 56.9
CBR_g20270 Chara braunii HOM05D004911 ORTHO05D005930 2.2e-06 58.2 69 39.1
SHI23756 Sapria himalayana HOM05D000360 ORTHO05D000234 2.2e-06 58.2 40 67.5
HPP92_012845 Vanilla planifolia HOM05D004911 ORTHO05D005930 8.5e-06 56.2 202 23.3


User provided reference genes

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