Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI47121 Sapria himalayana HOM05D001607 ORTHO05D010610 1.4e-40 169.1 78 100.0
SHI47040 Sapria himalayana HOM05D001607 ORTHO05D010610 4.1e-37 157.5 78 93.6
SHI51100 Sapria himalayana HOM05D001607 ORTHO05D010610 2.5e-34 148.3 78 89.7
SHI51493 Sapria himalayana HOM05D001607 ORTHO05D001893 9.4e-34 146.4 78 88.5
SHI52001 Sapria himalayana HOM05D001607 ORTHO05D010610 3.6e-33 144.4 78 85.9
SHI27291 Sapria himalayana HOM05D001607 ORTHO05D001893 1.4e-32 142.5 78 84.6
SHI51363 Sapria himalayana HOM05D001607 ORTHO05D010610 4.0e-32 141.0 78 84.6
SHI50967 Sapria himalayana HOM05D001607 ORTHO05D010610 2.6e-31 138.3 78 84.6
SHI51481 Sapria himalayana HOM05D001607 ORTHO05D010610 6.3e-30 133.7 82 79.3
SHI51575 Sapria himalayana HOM05D001607 ORTHO05D001893 6.3e-30 133.7 78 82.1
SHI49988 Sapria himalayana HOM05D001607 ORTHO05D010610 1.8e-29 132.1 78 76.9
SHI50875 Sapria himalayana HOM05D001607 ORTHO05D010610 7.0e-29 130.2 65 89.2
SHI51257 Sapria himalayana HOM05D001607 ORTHO05D010610 9.1e-29 129.8 84 77.4
SHI51659 Sapria himalayana HOM05D001607 ORTHO05D001893 1.6e-28 129.0 65 87.7
SHI51314 Sapria himalayana HOM05D001607 ORTHO05D010610 8.5e-27 123.2 65 84.6
SHI52825 Sapria himalayana HOM05D001607 ORTHO05D001893 2.0e-20 102.1 61 80.3
SHI36350 Sapria himalayana HOM05D001607 ORTHO05D010610 7.7e-20 100.1 58 81.0
SHI50996 Sapria himalayana HOM05D001607 ORTHO05D010610 7.7e-20 100.1 50 92.0
SHI36760 Sapria himalayana HOM05D001607 ORTHO05D010610 1.0e-19 99.8 58 81.0
SHI53307 Sapria himalayana HOM05D001607 ORTHO05D010610 1.0e-19 99.8 57 82.5
SHI51373 Sapria himalayana HOM05D001607 ORTHO05D010610 1.3e-19 99.4 64 76.6
SHI53323 Sapria himalayana HOM05D001607 ORTHO05D010610 1.3e-19 99.4 57 82.5
SHI50834 Sapria himalayana HOM05D001607 ORTHO05D010610 1.7e-19 99.0 50 90.0
SHI50518 Sapria himalayana HOM05D001607 ORTHO05D010610 1.6e-17 92.4 67 64.2
SHI51824 Sapria himalayana HOM05D001607 ORTHO05D010610 8.0e-17 90.1 50 78.0
SHI38909 Sapria himalayana HOM05D001607 ORTHO05D010610 3.0e-16 88.2 50 84.0
SHI51502 Sapria himalayana HOM05D001607 ORTHO05D010610 4.0e-16 87.8 50 78.0
SHI53240 Sapria himalayana HOM05D001607 ORTHO05D010610 8.9e-16 86.7 50 76.0
SHI51434 Sapria himalayana HOM05D001607 ORTHO05D010610 1.7e-14 82.4 50 80.0
SHI50598 Sapria himalayana HOM05D001607 ORTHO05D010610 2.9e-14 81.6 42 88.1
SHI35171 Sapria himalayana HOM05D001607 ORTHO05D010610 1.3e-11 72.8 42 83.3
MBI18_g25519_MAGBIO Magnolia biondii HOM05D001607 ORTHO05D001893 6.6e-11 70.5 91 48.4
SHI19793 Sapria himalayana HOM05D001607 ORTHO05D001893 1.1e-10 69.7 91 46.2
Cfa022712 Carpinus fangiana HOM05D001607 ORTHO05D001893 3.3e-10 68.2 91 46.2
Haze_13673 Corylus avellana HOM05D001607 ORTHO05D001893 3.3e-10 68.2 91 46.2
Manes.06G148500 Manihot esculenta HOM05D001607 ORTHO05D001893 3.3e-10 68.2 91 46.2
GSVIVG01028929001 Vitis vinifera HOM05D001607 ORTHO05D001893 3.3e-10 68.2 91 45.1
Dinv28425 Davidia involucrata HOM05D001607 ORTHO05D001893 5.6e-10 67.4 91 46.2
Sabra12G0106800 Salix brachista HOM05D001607 ORTHO05D001893 5.6e-10 67.4 91 46.2
arahy.Tifrunner.gnm1.ann1.2YSW8E Arachis hypogaea HOM05D001607 ORTHO05D001893 7.3e-10 67.0 91 45.1
Ciclev10004167m.g Citrus clementina HOM05D001607 ORTHO05D001893 7.3e-10 67.0 91 46.2
Medtr1g101030 Medicago truncatula HOM05D001607 ORTHO05D001893 7.3e-10 67.0 91 45.1
Potri.012G142200 Populus trichocarpa HOM05D001607 ORTHO05D001893 7.3e-10 67.0 91 45.1
Sc25g0000580 Simmondsia chinensis HOM05D001607 ORTHO05D001893 7.3e-10 67.0 91 45.1
Lj5g0010480 Lotus japonicus HOM05D001607 ORTHO05D001893 9.5e-10 66.6 91 45.1
Psat6g198240 Pisum sativum HOM05D001607 ORTHO05D001893 9.5e-10 66.6 91 45.1
Ah.07g207010 Amaranthus hybridus HOM05D001607 ORTHO05D001893 1.2e-09 66.2 91 44.0
CSS0006931 Camellia sinensis var. sinensis HOM05D001607 ORTHO05D001893 1.2e-09 66.2 91 45.1
EL10Ac3g05618 Beta vulgaris HOM05D001607 ORTHO05D001893 1.6e-09 65.9 91 44.0
Glyma.16G182500 Glycine max HOM05D001607 ORTHO05D001893 2.1e-09 65.5 91 45.1
arahy.Tifrunner.gnm1.ann1.HZL4S5 Arachis hypogaea HOM05D001607 ORTHO05D001893 2.8e-09 65.1 91 44.0
arahy.Tifrunner.gnm1.ann1.M3PRP5 Arachis hypogaea HOM05D001607 ORTHO05D001893 2.8e-09 65.1 91 44.0
Ca_05502_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 2.8e-09 65.1 91 45.1
Medtr0025s0060 Medicago truncatula HOM05D001607 ORTHO05D001893 2.8e-09 65.1 91 45.1
Phvul.004G114200 Phaseolus vulgaris HOM05D001607 ORTHO05D001893 2.8e-09 65.1 91 45.1
VMungo0464G1130 Vigna mungo HOM05D001607 ORTHO05D001893 2.8e-09 65.1 91 45.1
CiPaw.04G071800 Carya illinoinensis HOM05D001607 ORTHO05D001893 3.6e-09 64.7 91 42.9
Rhsim03G0187200 Rhododendron simsii HOM05D001607 ORTHO05D001893 3.6e-09 64.7 91 44.0
Hund04758 Selenicereus undatus HOM05D001607 ORTHO05D001893 3.6e-09 64.7 91 42.9
vmacro06666 Vaccinium macrocarpon HOM05D001607 ORTHO05D001893 3.6e-09 64.7 91 44.0
MD07G1272600 Malus domestica HOM05D001607 ORTHO05D001893 4.7e-09 64.3 91 44.0
TWI39G1280 Tripterygium wilfordii HOM05D001607 ORTHO05D001893 4.7e-09 64.3 91 45.1
Aqoxy1G00239 Aquilegia oxysepala HOM05D001607 ORTHO05D001893 6.2e-09 63.9 91 44.0
Lj2g0000053 Lotus japonicus HOM05D001607 ORTHO05D001893 6.2e-09 63.9 91 45.1
Zm00001eb249900 Zea mays HOM05D001607 ORTHO05D001893 6.2e-09 63.9 91 44.0
Actinidia34121 Actinidia chinensis HOM05D001607 ORTHO05D001893 8.0e-09 63.5 91 44.0
Ca_10751_v3 Cicer arietinum L. HOM05D001607 ORTHO05D001893 8.0e-09 63.5 91 45.1
TPR.G8164 Trifolium pratense HOM05D001607 ORTHO05D001893 8.0e-09 63.5 91 44.0
Actinidia25880 Actinidia chinensis HOM05D001607 ORTHO05D001893 1.0e-08 63.2 91 44.0
AUR62015965 Chenopodium quinoa HOM05D001607 ORTHO05D001893 1.0e-08 63.2 91 42.9
AUR62021171 Chenopodium quinoa HOM05D001607 ORTHO05D001893 1.0e-08 63.2 91 42.9
Eucgr.A02778 Eucalyptus grandis HOM05D001607 ORTHO05D001893 1.0e-08 63.2 91 42.9
Glyma.09G137200 Glycine max HOM05D001607 ORTHO05D001893 1.0e-08 63.2 91 44.0
Potri.015G145300 Populus trichocarpa HOM05D001607 ORTHO05D001893 1.0e-08 63.2 91 44.0
ATR0680G301 Amborella trichopoda HOM05D001607 ORTHO05D001893 1.4e-08 62.8 91 42.9
CDE08G0131 Ceratophyllum demersum HOM05D001607 ORTHO05D001893 1.4e-08 62.8 91 42.9
Glyma.10G234500 Glycine max HOM05D001607 ORTHO05D001893 1.4e-08 62.8 91 42.9
PSO478G2555 Papaver somniferum HOM05D001607 ORTHO05D001893 1.4e-08 62.8 91 44.0
PSO782G3230 Papaver somniferum HOM05D001607 ORTHO05D001893 1.4e-08 62.8 91 44.0
Lj1A999G29 Lonicera japonica HOM05D001607 ORTHO05D001893 1.8e-08 62.4 78 46.2
Nn1g01507 Nelumbo nucifera HOM05D001607 ORTHO05D001893 1.8e-08 62.4 91 42.9
SHI50530 Sapria himalayana HOM05D011114 ORTHO05D010610 1.8e-08 62.4 54 57.4
SHI52823 Sapria himalayana HOM05D001607 ORTHO05D010610 1.8e-08 62.4 30 86.7
CAN.G307.24 Capsicum annuum HOM05D001607 ORTHO05D001893 2.3e-08 62.0 91 42.9
MD01G1203100 Malus domestica HOM05D001607 ORTHO05D001893 2.3e-08 62.0 91 42.9
Prupe.2G295900 Prunus persica HOM05D001607 ORTHO05D001893 2.3e-08 62.0 91 42.9
SHI53468 Sapria himalayana HOM05D001607 ORTHO05D001893 2.3e-08 62.0 30 83.3
Solyc03g025610.3 Solanum lycopersicum HOM05D001607 ORTHO05D001893 2.3e-08 62.0 91 42.9
Sopen03g004440 Solanum pennellii HOM05D001607 ORTHO05D001893 2.3e-08 62.0 91 42.9
Gohir.A08G099300 Gossypium hirsutum HOM05D001607 ORTHO05D001893 3.1e-08 61.6 91 42.9
Gohir.D08G110716 Gossypium hirsutum HOM05D001607 ORTHO05D001893 3.1e-08 61.6 91 42.9
Gorai.004G118300 Gossypium raimondii HOM05D001607 ORTHO05D001893 3.1e-08 61.6 91 42.9
SHI52916 Sapria himalayana HOM05D001607 ORTHO05D010610 3.1e-08 61.6 27 92.6
TAR375G0166 Trochodendron aralioides HOM05D001607 ORTHO05D001893 3.1e-08 61.6 91 42.9
VMungo0720G1584 Vigna mungo HOM05D001607 ORTHO05D001893 3.1e-08 61.6 91 42.9
Duzib205G1855 Durio zibethinus HOM05D001607 ORTHO05D001893 5.2e-08 60.8 91 42.9
Phvul.007G071600 Phaseolus vulgaris HOM05D001607 ORTHO05D001893 5.2e-08 60.8 91 42.9
SHI53343 Sapria himalayana HOM05D001607 ORTHO05D010610 5.2e-08 60.8 27 92.6
SHI54211 Sapria himalayana HOM05D001607 ORTHO05D010610 5.2e-08 60.8 27 92.6
ClCG01G004440 Citrullus lanatus HOM05D001607 ORTHO05D001893 6.8e-08 60.5 91 42.9
Duzib068G0651 Durio zibethinus HOM05D001607 ORTHO05D001893 6.8e-08 60.5 91 42.9
Lalb_Chr02g0141081 Lupinus albus HOM05D001607 ORTHO05D001893 6.8e-08 60.5 91 42.9
SHI52576 Sapria himalayana HOM05D001607 ORTHO05D010610 6.8e-08 60.5 30 83.3
Atru.chr1.433 Acer truncatum HOM05D001607 ORTHO05D001893 8.9e-08 60.1 91 42.9
Cpa.g.sc107.66 Carica papaya HOM05D001607 ORTHO05D001893 8.9e-08 60.1 90 42.2
MELO3C005470.2 Cucumis melo HOM05D001607 ORTHO05D001893 8.9e-08 60.1 91 41.8
CsaV3_5G004660 Cucumis sativus L. HOM05D001607 ORTHO05D001893 8.9e-08 60.1 91 41.8
FvH4_7g29630 Fragaria vesca HOM05D001607 ORTHO05D001893 8.9e-08 60.1 91 41.8
FAN01G0648 Fragaria x ananassa HOM05D001607 ORTHO05D001893 8.9e-08 60.1 91 41.8
FAN03G1039 Fragaria x ananassa HOM05D001607 ORTHO05D001893 8.9e-08 60.1 91 41.8
FAN03G1056 Fragaria x ananassa HOM05D001607 ORTHO05D001893 8.9e-08 60.1 91 41.8
FAN06G1924 Fragaria x ananassa HOM05D001607 ORTHO05D001893 8.9e-08 60.1 91 41.8
FAN06G4239 Fragaria x ananassa HOM05D001607 ORTHO05D001893 8.9e-08 60.1 91 41.8
FAN10G1529 Fragaria x ananassa HOM05D001607 ORTHO05D001893 8.9e-08 60.1 91 41.8
FAN10G2541 Fragaria x ananassa HOM05D001607 ORTHO05D001893 8.9e-08 60.1 91 41.8
Gohir.A11G010500 Gossypium hirsutum HOM05D001607 ORTHO05D001893 8.9e-08 60.1 91 42.9
Gohir.D11G009700 Gossypium hirsutum HOM05D001607 ORTHO05D001893 8.9e-08 60.1 91 42.9
Gorai.007G011200 Gossypium raimondii HOM05D001607 ORTHO05D001893 8.9e-08 60.1 91 42.9
Lalb_Chr19g0130771 Lupinus albus HOM05D001607 ORTHO05D001893 8.9e-08 60.1 91 42.9
Sopen03g004450 Solanum pennellii HOM05D001607 ORTHO05D001893 8.9e-08 60.1 91 41.8
Thecc.03G178600 Theobroma cacao HOM05D001607 ORTHO05D001893 8.9e-08 60.1 91 42.9
Os02g0664300 Oryza sativa ssp. japonica HOM05D001607 ORTHO05D001893 1.2e-07 59.7 91 41.8
CiPaw.03G107800 Carya illinoinensis HOM05D001607 ORTHO05D001893 1.5e-07 59.3 91 40.7
COL.COLO4_14332 Corchorus olitorius HOM05D001607 ORTHO05D001893 1.5e-07 59.3 91 42.9
Nitab4.5_0005845g0050 Nicotiana tabacum HOM05D001607 ORTHO05D001893 1.5e-07 59.3 91 40.7
SHI53064 Sapria himalayana HOM05D001607 ORTHO05D010610 1.5e-07 59.3 27 88.9
arahy.Tifrunner.gnm1.ann1.CMMP9X Arachis hypogaea HOM05D001607 ORTHO05D001893 2.0e-07 58.9 91 41.8
arahy.Tifrunner.gnm1.ann1.GK85WT Arachis hypogaea HOM05D001607 ORTHO05D001893 2.0e-07 58.9 91 41.8
SHI52836 Sapria himalayana HOM05D001607 ORTHO05D010610 2.0e-07 58.9 27 88.9
CANSAT21G1423 Cannabis sativa HOM05D001607 ORTHO05D001893 2.6e-07 58.5 91 41.8
RcHm_v2.0_Chr1g0377641 Rosa chinensis HOM05D001607 ORTHO05D001893 3.4e-07 58.2 91 40.7
SHI52799 Sapria himalayana HOM05D001607 ORTHO05D010610 3.4e-07 58.2 30 80.0
SHI52897 Sapria himalayana HOM05D001607 ORTHO05D010610 3.4e-07 58.2 30 80.0
DCAR_001509 Daucus carota HOM05D001607 ORTHO05D001893 5.8e-07 57.4 91 41.8
Psat0s3405g0040 Pisum sativum HOM05D001607 ORTHO05D001893 5.8e-07 57.4 91 41.8
SHI53663 Sapria himalayana HOM05D001607 ORTHO05D010610 5.8e-07 57.4 30 80.0
SHI54070 Sapria himalayana HOM05D001607 ORTHO05D010610 5.8e-07 57.4 28 82.1
Sed0028131 Sechium edule HOM05D001607 ORTHO05D001893 5.8e-07 57.4 91 41.8
SHI52885 Sapria himalayana HOM05D001607 ORTHO05D010610 7.5e-07 57.0 28 85.7
Peaxi162Scf00444g00720 Petunia axillaris HOM05D001607 ORTHO05D001893 1.3e-06 56.2 91 39.6
PGR042G0514 Punica granatum HOM05D001607 ORTHO05D001893 1.3e-06 56.2 91 39.6
Carub.0007s2059 Capsella rubella HOM05D001607 ORTHO05D001893 1.7e-06 55.8 90 38.9
CARHR227400 Cardamine hirsuta HOM05D001607 ORTHO05D001893 1.7e-06 55.8 90 38.9
Migut.F00330 Erythranthe guttata HOM05D001607 ORTHO05D001893 1.7e-06 55.8 91 40.7
Oeu045396.1 Olea europaea HOM05D001607 ORTHO05D001893 1.7e-06 55.8 91 39.6
SHI53915 Sapria himalayana HOM05D001607 ORTHO05D010610 1.7e-06 55.8 27 85.2
SEGI_31249 Sequoiadendron giganteum HOM05D001607 ORTHO05D001893 1.7e-06 55.8 88 39.8
Aa31LG6G2920 Aethionema arabicum HOM05D001607 ORTHO05D001893 2.2e-06 55.5 90 38.9
SHI39452 Sapria himalayana HOM05D001607 ORTHO05D001893 2.2e-06 55.5 55 50.9
SHI20615 Sapria himalayana HOM05D001607 ORTHO05D010610 2.9e-06 55.1 27 85.2
unitig_46.g18794 Utricularia gibba HOM05D001607 ORTHO05D001893 2.9e-06 55.1 91 40.7
MSTRG.27107 Avicennia marina HOM05D001607 ORTHO05D001893 4.9e-06 54.3 91 40.7
SalBow4G1573 Salvia bowleyana HOM05D001607 ORTHO05D001893 4.9e-06 54.3 91 40.7
AL7G33300 Arabidopsis lyrata HOM05D001607 ORTHO05D001893 6.4e-06 53.9 90 37.8
AT4G20850 Arabidopsis thaliana HOM05D001607 ORTHO05D001893 6.4e-06 53.9 90 37.8
SHI31372 Sapria himalayana HOM05D001607 ORTHO05D001893 6.4e-06 53.9 50 56.0
HPP92_011358 Vanilla planifolia HOM05D001607 ORTHO05D001893 6.4e-06 53.9 91 39.6
SGA_v2.0_scaffold44G16733 Striga asiatica HOM05D001607 ORTHO05D001893 8.3e-06 53.5 91 40.7


User provided reference genes

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