Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI47009 Sapria himalayana HOM05D003883 ORTHO05D004605 5.1e-67 257.7 137 100.0
SHI19852 Sapria himalayana HOM05D003883 ORTHO05D004605 2.0e-26 122.9 123 63.4
SHI47059 Sapria himalayana HOM05D003883 ORTHO05D004605 5.9e-23 111.3 123 59.3
SHI16558 Sapria himalayana HOM05D003883 ORTHO05D004605 1.9e-21 106.3 64 84.4
SHI09697 Sapria himalayana HOM05D003883 ORTHO05D004605 4.2e-21 105.1 62 85.5
SHI36014 Sapria himalayana HOM05D003883 ORTHO05D004605 5.5e-21 104.8 154 51.3
SHI01632 Sapria himalayana HOM05D003883 ORTHO05D004605 7.2e-21 104.4 59 88.1
SHI16809 Sapria himalayana HOM05D003883 ORTHO05D004605 7.2e-21 104.4 59 88.1
SHI40358 Sapria himalayana HOM05D003883 ORTHO05D004605 7.2e-21 104.4 62 83.9
SHI00855 Sapria himalayana HOM05D000105 ORTHO05D000023 1.2e-20 103.6 59 88.1
SHI45198 Sapria himalayana HOM05D003883 ORTHO05D004605 2.1e-20 102.8 67 80.6
SHI31989 Sapria himalayana HOM05D003883 ORTHO05D004605 3.6e-20 102.1 62 83.9
SHI24738 Sapria himalayana HOM05D003883 ORTHO05D004605 8.0e-20 100.9 59 86.4
SHI34947 Sapria himalayana HOM05D003883 ORTHO05D004605 8.0e-20 100.9 59 84.7
SHI12193 Sapria himalayana HOM05D000105 ORTHO05D004605 2.3e-19 99.4 59 83.1
SHI15762 Sapria himalayana HOM05D003883 ORTHO05D004605 2.3e-19 99.4 62 80.6
SHI16150 Sapria himalayana HOM05D003883 ORTHO05D004605 2.3e-19 99.4 62 80.6
SHI22499 Sapria himalayana HOM05D003883 ORTHO05D004605 2.3e-19 99.4 79 70.9
SHI22734 Sapria himalayana HOM05D003883 ORTHO05D004605 2.3e-19 99.4 59 84.7
SHI48034 Sapria himalayana HOM05D003883 ORTHO05D004605 2.3e-19 99.4 59 83.1
SHI01655 Sapria himalayana HOM05D002349 ORTHO05D002464 6.8e-19 97.8 59 84.7
SHI03434 Sapria himalayana HOM05D003883 ORTHO05D004605 6.8e-19 97.8 58 84.5
SHI49925 Sapria himalayana HOM05D003883 ORTHO05D004605 6.8e-19 97.8 111 56.8
SHI53632 Sapria himalayana HOM05D003883 ORTHO05D004605 2.0e-18 96.3 55 87.3
SHI27587 Sapria himalayana HOM05D003883 ORTHO05D004605 3.4e-18 95.5 59 79.7
SHI53701 Sapria himalayana HOM05D003883 ORTHO05D004605 4.4e-18 95.1 59 81.4
SHI54185 Sapria himalayana HOM05D003883 ORTHO05D004605 1.7e-17 93.2 59 79.7
SHI15221 Sapria himalayana HOM05D003883 ORTHO05D004605 2.2e-17 92.8 59 79.7
SHI50134 Sapria himalayana HOM05D003883 ORTHO05D004605 2.2e-17 92.8 59 78.0
SHI15886 Sapria himalayana HOM05D003883 ORTHO05D004605 6.3e-17 91.3 62 79.0
SHI51464 Sapria himalayana HOM05D003883 ORTHO05D004605 1.4e-16 90.1 55 81.8
Lsat_1_v5_gn_6_111041 Lactuca sativa HOM05D003883 ORTHO05D004605 1.8e-16 89.7 68 64.7
Potri.019G069000 Populus trichocarpa HOM05D003883 ORTHO05D004605 1.8e-16 89.7 65 70.8
HanXRQChr05g0150991 Helianthus annuus HOM05D003883 ORTHO05D004605 2.4e-16 89.4 68 66.2
BcaB01g01452 Brassica carinata HOM05D003883 ORTHO05D004605 4.1e-16 88.6 59 74.6
SHI47005 Sapria himalayana HOM05D003883 ORTHO05D004605 4.1e-16 88.6 62 74.2
Sabra19G0082500 Salix brachista HOM05D003883 ORTHO05D004605 5.3e-16 88.2 65 69.2
SHI45438 Sapria himalayana HOM05D003883 ORTHO05D004605 5.3e-16 88.2 59 76.3
TWI75G0838 Tripterygium wilfordii HOM05D003883 ORTHO05D004605 5.3e-16 88.2 59 74.6
HanXRQChr12g0369281 Helianthus annuus HOM05D003883 ORTHO05D004605 9.1e-16 87.4 68 63.2
Aa31LG9G11890 Aethionema arabicum HOM05D003883 ORTHO05D004605 1.2e-15 87.0 59 71.2
BcaC04g21018 Brassica carinata HOM05D003883 ORTHO05D004605 1.2e-15 87.0 59 72.9
C09p36620 Brassica napus HOM05D003883 ORTHO05D004605 1.2e-15 87.0 59 72.9
BolC9t56494H Brassica oleracea HOM05D003883 ORTHO05D004605 1.2e-15 87.0 59 72.9
AL6G43920 Arabidopsis lyrata HOM05D003883 ORTHO05D004605 1.6e-15 86.7 59 71.2
AT4G10110 Arabidopsis thaliana HOM05D003883 ORTHO05D004605 1.6e-15 86.7 59 71.2
FvH4_2g00580 Fragaria vesca HOM05D003883 ORTHO05D004605 1.6e-15 86.7 65 66.2
FAN06G0896 Fragaria x ananassa HOM05D003883 ORTHO05D004605 1.6e-15 86.7 65 66.2
Atru.chr13.2533 Acer truncatum HOM05D003883 ORTHO05D004605 2.0e-15 86.3 59 69.5
arahy.Tifrunner.gnm1.ann1.6B58CR Arachis hypogaea HOM05D003883 ORTHO05D004605 2.0e-15 86.3 59 72.9
arahy.Tifrunner.gnm1.ann1.DBA4ID Arachis hypogaea HOM05D003883 ORTHO05D004605 2.0e-15 86.3 59 72.9
ECA246G4775 Erigeron canadensis HOM05D003883 ORTHO05D004605 2.0e-15 86.3 59 71.2
TPR.G1761 Trifolium pratense HOM05D003883 ORTHO05D004605 2.0e-15 86.3 64 68.8
A09p28820 Brassica napus HOM05D003883 ORTHO05D004605 2.7e-15 85.9 59 71.2
BraA09t38444Z Brassica rapa HOM05D003883 ORTHO05D004605 2.7e-15 85.9 59 71.2
Thhalv10029015m.g Eutrema salsugineum HOM05D003883 ORTHO05D004605 2.7e-15 85.9 59 71.2
FAN20G1119 Fragaria x ananassa HOM05D003883 ORTHO05D004605 2.7e-15 85.9 65 64.6
Lsat_1_v5_gn_1_24520 Lactuca sativa HOM05D005117 ORTHO05D005956 2.7e-15 85.9 59 71.2
RcHm_v2.0_Chr6g0251031 Rosa chinensis HOM05D003883 ORTHO05D004605 2.7e-15 85.9 59 71.2
Sp6g07310 Schrenkiella parvula HOM05D003883 ORTHO05D004605 2.7e-15 85.9 59 71.2
TWI12G1089 Tripterygium wilfordii HOM05D003883 ORTHO05D004605 2.7e-15 85.9 59 71.2
FAN27G2158 Fragaria x ananassa HOM05D003883 ORTHO05D004605 3.5e-15 85.5 65 64.6
Lalb_Chr02g0141881 Lupinus albus HOM05D003883 ORTHO05D004605 3.5e-15 85.5 59 71.2
Medtr1g096170 Medicago truncatula HOM05D003883 ORTHO05D004605 3.5e-15 85.5 59 72.9
Hund26941 Selenicereus undatus HOM05D003883 ORTHO05D004605 3.5e-15 85.5 59 72.9
MSTRG.1604 Avicennia marina HOM05D003883 ORTHO05D004605 4.5e-15 85.1 65 64.6
Cpa.g.sc21.99 Carica papaya HOM05D003883 ORTHO05D004605 4.5e-15 85.1 59 71.2
Psat6g186320 Pisum sativum HOM05D003883 ORTHO05D004605 4.5e-15 85.1 59 71.2
SalBow7G2433 Salvia bowleyana HOM05D003883 ORTHO05D004605 4.5e-15 85.1 74 58.1
Ca_10599_v3 Cicer arietinum L. HOM05D003883 ORTHO05D004605 7.7e-15 84.3 65 63.1
Cc10_g16020 Coffea canephora HOM05D003883 ORTHO05D004605 7.7e-15 84.3 68 60.3
Duzib147G1304 Durio zibethinus HOM05D003883 ORTHO05D004605 7.7e-15 84.3 65 63.1
Glyma.10G214800 Glycine max HOM05D003883 ORTHO05D004605 7.7e-15 84.3 65 63.1
Glyma.20G177100 Glycine max HOM05D003883 ORTHO05D004605 7.7e-15 84.3 65 63.1
Lj5g0005523 Lotus japonicus HOM05D003883 ORTHO05D004605 7.7e-15 84.3 65 63.1
Solyc11g039950.3 Solanum lycopersicum HOM05D003883 ORTHO05D004605 7.7e-15 84.3 68 63.2
Sopen11g016790 Solanum pennellii HOM05D003883 ORTHO05D004605 7.7e-15 84.3 68 63.2
PGSC0003DMG400026862 Solanum tuberosum HOM05D003883 ORTHO05D004605 7.7e-15 84.3 68 63.2
GSVIVG01037209001 Vitis vinifera HOM05D003883 ORTHO05D004605 7.7e-15 84.3 65 64.6
CARHR261150 Cardamine hirsuta HOM05D003883 ORTHO05D004605 1.0e-14 84.0 59 67.8
Cc10_g13970 Coffea canephora HOM05D003883 ORTHO05D004605 1.0e-14 84.0 68 60.3
Lj7P418T16 Lonicera japonica HOM05D003883 ORTHO05D004605 1.0e-14 84.0 59 69.5
MD10G1003200 Malus domestica HOM05D003883 ORTHO05D004605 1.0e-14 84.0 65 63.1
PSO210G0567 Papaver somniferum HOM05D003883 ORTHO05D004605 1.0e-14 84.0 59 69.5
THA.LOC104815789 Tarenaya hassleriana HOM05D003883 ORTHO05D004605 1.0e-14 84.0 59 67.8
Actinidia29370 Actinidia chinensis HOM05D003883 ORTHO05D004605 1.3e-14 83.6 59 67.8
DCAR_001170 Daucus carota HOM05D003883 ORTHO05D004605 1.3e-14 83.6 64 64.1
DCAR_010106 Daucus carota HOM05D003883 ORTHO05D004605 1.3e-14 83.6 64 64.1
Manes.18G112700 Manihot esculenta HOM05D003883 ORTHO05D004605 1.3e-14 83.6 59 69.5
Nitab4.5_0000009g0400 Nicotiana tabacum HOM05D003883 ORTHO05D004605 1.3e-14 83.6 59 69.5
Nitab4.5_0001202g0010 Nicotiana tabacum HOM05D003883 ORTHO05D004605 1.3e-14 83.6 68 61.8
PSO761G0643 Papaver somniferum HOM05D003883 ORTHO05D004605 1.3e-14 83.6 59 67.8
SHI17604 Sapria himalayana HOM05D003883 ORTHO05D004605 1.3e-14 83.6 140 47.9
VMungo0720G2352 Vigna mungo HOM05D003883 ORTHO05D004605 1.3e-14 83.6 65 63.1
CiPaw.03G013400 Carya illinoinensis HOM05D003883 ORTHO05D004605 1.7e-14 83.2 59 69.5
ClCG08G000830 Citrullus lanatus HOM05D003883 ORTHO05D004605 1.7e-14 83.2 59 71.2
MELO3C033524.2 Cucumis melo HOM05D003883 ORTHO05D004605 1.7e-14 83.2 59 71.2
Dinv22125 Davidia involucrata HOM05D003883 ORTHO05D004605 1.7e-14 83.2 59 69.5
Lsat_1_v5_gn_8_63781 Lactuca sativa HOM05D003883 ORTHO05D004605 1.7e-14 83.2 67 64.2
Phvul.007G091200 Phaseolus vulgaris HOM05D003883 ORTHO05D004605 1.7e-14 83.2 65 63.1
CANSAT01G1230 Cannabis sativa HOM05D003883 ORTHO05D004605 2.2e-14 82.8 64 65.6
Peaxi162Scf00078g00928 Petunia axillaris HOM05D003883 ORTHO05D004605 2.2e-14 82.8 68 58.8
ClCG08G001170 Citrullus lanatus HOM05D003883 ORTHO05D004605 2.9e-14 82.4 59 71.2
QL09p001675 Quercus lobata HOM05D003883 ORTHO05D004605 2.9e-14 82.4 59 67.8
Sc10g0006520 Simmondsia chinensis HOM05D003883 ORTHO05D004605 2.9e-14 82.4 68 60.3
SGA_v2.0_scaffold118G32634 Striga asiatica HOM05D003883 ORTHO05D004605 2.9e-14 82.4 59 69.5
Thecc.04G023200 Theobroma cacao HOM05D003883 ORTHO05D004605 2.9e-14 82.4 65 61.5
Hma1.2p1_1248F.1_g270250 Hydrangea macrophylla HOM05D003883 ORTHO05D004605 3.8e-14 82.0 59 67.8
Sed0003271 Sechium edule HOM05D003883 ORTHO05D004605 3.8e-14 82.0 64 65.6
TAR633G0350 Trochodendron aralioides HOM05D003883 ORTHO05D004605 3.8e-14 82.0 68 57.4
AUR62013386 Chenopodium quinoa HOM05D003883 ORTHO05D004605 5.0e-14 81.6 59 69.5
CsaV3_5G039780 Cucumis sativus L. HOM05D003883 ORTHO05D004605 5.0e-14 81.6 64 65.6
Ah.05g170410 Amaranthus hybridus HOM05D003883 ORTHO05D004605 6.5e-14 81.3 59 67.8
Gohir.A05G374200 Gossypium hirsutum HOM05D003883 ORTHO05D004605 6.5e-14 81.3 65 60.0
Gohir.D04G041300 Gossypium hirsutum HOM05D003883 ORTHO05D004605 6.5e-14 81.3 65 60.0
Gorai.012G046700 Gossypium raimondii HOM05D003883 ORTHO05D004605 6.5e-14 81.3 65 60.0
Oeu028627.2 Olea europaea HOM05D003883 ORTHO05D004605 6.5e-14 81.3 68 58.8
Sed0024898 Sechium edule HOM05D003883 ORTHO05D004605 6.5e-14 81.3 64 65.6
Haze_13971 Corylus avellana HOM05D003883 ORTHO05D004605 8.5e-14 80.9 59 67.8
Eucgr.F02940 Eucalyptus grandis HOM05D003883 ORTHO05D004605 8.5e-14 80.9 62 64.5
AUR62038537 Chenopodium quinoa HOM05D003883 ORTHO05D004605 1.1e-13 80.5 68 61.8
Ciclev10022415m.g Citrus clementina HOM05D003883 ORTHO05D004605 1.1e-13 80.5 65 58.5
MSTRG.25500 Avicennia marina HOM05D003883 ORTHO05D004605 1.5e-13 80.1 59 67.8
EL10Ac1g01277 Beta vulgaris HOM05D003883 ORTHO05D004605 1.5e-13 80.1 59 66.1
Rhsim02G0081700 Rhododendron simsii HOM05D003883 ORTHO05D004605 1.5e-13 80.1 68 58.8
GSVIVG01011528001 Vitis vinifera HOM05D003883 ORTHO05D004605 1.5e-13 80.1 59 66.1
CSS0035251 Camellia sinensis var. sinensis HOM05D003883 ORTHO05D004605 2.5e-13 79.3 59 64.4
Cfa008054 Carpinus fangiana HOM05D003883 ORTHO05D004605 2.5e-13 79.3 59 66.1
Os05g0427300 Oryza sativa ssp. japonica HOM05D003883 ORTHO05D004605 2.5e-13 79.3 68 57.4
Nitab4.5_0005094g0010 Nicotiana tabacum HOM05D003883 ORTHO05D004605 3.2e-13 79.0 68 57.4
Migut.C01393 Erythranthe guttata HOM05D003883 ORTHO05D004605 4.2e-13 78.6 64 60.9
CsaV3_5G039770 Cucumis sativus L. HOM05D003883 ORTHO05D004605 5.5e-13 78.2 59 66.1
DCAR_027538 Daucus carota HOM05D003883 ORTHO05D004605 5.5e-13 78.2 59 64.4
MBI10_g20271_MAGBIO Magnolia biondii HOM05D003883 ORTHO05D004605 5.5e-13 78.2 59 61.0
Aqoxy5G01863 Aquilegia oxysepala HOM05D003883 ORTHO05D004605 9.4e-13 77.4 59 59.3
MBI17_g19026_MAGBIO Magnolia biondii HOM05D003883 ORTHO05D004605 1.2e-12 77.0 73 50.7
unitig_749.g13869 Utricularia gibba HOM05D003883 ORTHO05D004605 1.2e-12 77.0 59 62.7
MELO3C022158.2 Cucumis melo HOM05D003883 ORTHO05D004605 2.1e-12 76.3 59 66.1
Nn5g27336 Nelumbo nucifera HOM05D003883 ORTHO05D004605 2.7e-12 75.9 68 52.9
SHI20281 Sapria himalayana HOM05D003883 ORTHO05D004605 3.6e-12 75.5 38 94.7
PGR042G1493 Punica granatum HOM05D003883 ORTHO05D004605 4.7e-12 75.1 59 62.7
SHI13269 Sapria himalayana HOM05D003883 ORTHO05D004605 8.0e-12 74.3 62 66.1
Zm00001eb145960 Zea mays HOM05D003883 ORTHO05D004605 8.0e-12 74.3 82 48.8
Solyc10g081990.1 Solanum lycopersicum HOM05D003883 ORTHO05D004605 1.0e-11 73.9 59 61.0
MBI03_g20879_MAGBIO Magnolia biondii HOM05D003883 ORTHO05D004605 1.4e-11 73.6 68 52.9
MBI18_g04721_MAGBIO Magnolia biondii HOM05D003883 ORTHO05D004605 1.4e-11 73.6 59 59.3
SEGI_10411 Sequoiadendron giganteum HOM05D003883 ORTHO05D004605 4.0e-11 72.0 68 48.5
HPP92_004500 Vanilla planifolia HOM05D003883 ORTHO05D004605 4.0e-11 72.0 59 57.6
CDE02G3110 Ceratophyllum demersum HOM05D003883 ORTHO05D004605 5.2e-11 71.6 58 60.3
CDE04G3585 Ceratophyllum demersum HOM05D003883 ORTHO05D004605 1.2e-10 70.5 75 50.7
SHI25304 Sapria himalayana HOM05D003883 ORTHO05D004605 2.6e-10 69.3 37 86.5
AagrBONN_evm.TU.Sc2ySwM_228.826 Anthoceros agrestis HOM05D003883 ORTHO05D004605 5.7e-10 68.2 68 45.6
Carub.0006s2868 Capsella rubella HOM05D003883 ORTHO05D004605 7.5e-10 67.8 46 71.7
SHI29471 Sapria himalayana HOM05D003883 ORTHO05D004605 1.3e-09 67.0 37 83.8
SMO239G0046 Selaginella moellendorffii HOM05D003883 ORTHO05D004605 2.2e-09 66.2 66 45.5
SMO307G0014 Selaginella moellendorffii HOM05D003883 ORTHO05D004605 2.2e-09 66.2 66 45.5
SEGI_14755 Sequoiadendron giganteum HOM05D003883 ORTHO05D004605 2.8e-09 65.9 68 44.1
COL.COLO4_25136 Corchorus olitorius HOM05D003883 ORTHO05D004605 6.3e-09 64.7 46 69.6
Mapoly0019s0080 Marchantia polymorpha HOM05D003883 ORTHO05D004605 8.3e-09 64.3 59 49.2
CBR_g955 Chara braunii HOM05D003883 ORTHO05D004605 5.4e-08 61.6 64 42.2
RcHm_v2.0_Chr6g0280021 Rosa chinensis HOM05D003883 ORTHO05D004605 5.4e-08 61.6 45 64.4
SHI37949 Sapria himalayana HOM05D003883 ORTHO05D004605 2.7e-07 59.3 43 76.7
ATR1089G108 Amborella trichopoda HOM05D003883 ORTHO05D004605 3.8e-06 55.5 37 67.6
Lsat_1_v5_gn_7_27180 Lactuca sativa HOM05D003995 ORTHO05D004605 6.6e-06 54.7 40 62.5


User provided reference genes

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