Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI47005 Sapria himalayana HOM05D003883 ORTHO05D004605 1.6e-160 569.3 284 100.0
SHI48034 Sapria himalayana HOM05D003883 ORTHO05D004605 8.6e-93 344.4 257 74.3
SHI16558 Sapria himalayana HOM05D003883 ORTHO05D004605 1.0e-90 337.4 266 72.9
SHI16150 Sapria himalayana HOM05D003883 ORTHO05D004605 6.4e-88 328.2 318 61.3
SHI01632 Sapria himalayana HOM05D003883 ORTHO05D004605 1.9e-84 316.6 203 83.7
SHI45438 Sapria himalayana HOM05D003883 ORTHO05D004605 1.1e-82 310.8 172 93.0
SHI09697 Sapria himalayana HOM05D003883 ORTHO05D004605 6.8e-82 308.1 244 70.9
SHI15886 Sapria himalayana HOM05D003883 ORTHO05D004605 1.1e-79 300.8 200 82.0
SHI17604 Sapria himalayana HOM05D003883 ORTHO05D004605 4.1e-79 298.9 203 77.8
SHI15762 Sapria himalayana HOM05D003883 ORTHO05D004605 2.7e-78 296.2 209 78.0
SHI16809 Sapria himalayana HOM05D003883 ORTHO05D004605 1.9e-76 290.0 180 85.6
SHI36014 Sapria himalayana HOM05D003883 ORTHO05D004605 5.2e-74 282.0 234 67.9
SHI31989 Sapria himalayana HOM05D003883 ORTHO05D004605 6.4e-72 275.0 173 85.0
SHI24738 Sapria himalayana HOM05D003883 ORTHO05D004605 4.6e-70 268.9 209 71.8
SHI13269 Sapria himalayana HOM05D003883 ORTHO05D004605 6.6e-69 265.0 203 74.9
SHI45198 Sapria himalayana HOM05D003883 ORTHO05D004605 1.5e-68 263.8 273 58.2
SHI00855 Sapria himalayana HOM05D000105 ORTHO05D000023 9.6e-68 261.2 171 83.0
SHI12193 Sapria himalayana HOM05D000105 ORTHO05D004605 4.0e-66 255.8 257 61.1
SHI34947 Sapria himalayana HOM05D003883 ORTHO05D004605 1.3e-64 250.8 172 80.2
SHI19852 Sapria himalayana HOM05D003883 ORTHO05D004605 3.8e-64 249.2 196 72.4
SHI22734 Sapria himalayana HOM05D003883 ORTHO05D004605 9.0e-58 228.0 191 66.5
SHI49925 Sapria himalayana HOM05D003883 ORTHO05D004605 9.9e-57 224.6 147 81.6
SHI15221 Sapria himalayana HOM05D003883 ORTHO05D004605 1.6e-54 217.2 196 65.3
SHI50134 Sapria himalayana HOM05D003883 ORTHO05D004605 2.7e-54 216.5 147 78.9
SHI40358 Sapria himalayana HOM05D003883 ORTHO05D004605 6.2e-51 205.3 178 68.5
SHI28093 Sapria himalayana HOM05D002538 ORTHO05D000001 4.5e-49 199.1 186 62.4
SHI27587 Sapria himalayana HOM05D003883 ORTHO05D004605 2.4e-47 193.4 144 74.3
SHI25304 Sapria himalayana HOM05D003883 ORTHO05D004605 2.9e-40 169.9 148 67.6
SHI29471 Sapria himalayana HOM05D003883 ORTHO05D004605 2.9e-40 169.9 106 84.0
SHI52029 Sapria himalayana HOM05D003883 ORTHO05D004605 1.4e-39 167.5 96 88.5
SHI01655 Sapria himalayana HOM05D002349 ORTHO05D002464 1.9e-39 167.2 193 53.9
SHI03434 Sapria himalayana HOM05D003883 ORTHO05D004605 1.9e-39 167.2 185 57.3
SHI20166 Sapria himalayana HOM05D003883 ORTHO05D004605 3.9e-37 159.5 130 70.0
SHI22499 Sapria himalayana HOM05D003883 ORTHO05D004605 1.6e-35 154.1 263 41.8
SHI53632 Sapria himalayana HOM05D003883 ORTHO05D004605 1.2e-33 147.9 109 75.2
Thecc.04G023200 Theobroma cacao HOM05D003883 ORTHO05D004605 2.5e-31 140.2 172 51.7
SHI46342 Sapria himalayana HOM05D003883 ORTHO05D000233 7.2e-31 138.7 136 60.3
SHI46947 Sapria himalayana HOM05D003883 ORTHO05D000233 7.2e-31 138.7 136 60.3
GSVIVG01037209001 Vitis vinifera HOM05D003883 ORTHO05D004605 1.0e-29 134.8 171 49.7
CiPaw.03G013400 Carya illinoinensis HOM05D003883 ORTHO05D004605 1.1e-28 131.3 172 50.6
TWI12G1089 Tripterygium wilfordii HOM05D003883 ORTHO05D004605 1.9e-28 130.6 167 49.1
MSTRG.1604 Avicennia marina HOM05D003883 ORTHO05D004605 1.6e-27 127.5 174 51.1
Glyma.10G214800 Glycine max HOM05D003883 ORTHO05D004605 1.6e-27 127.5 167 49.7
TWI75G0838 Tripterygium wilfordii HOM05D003883 ORTHO05D004605 1.6e-27 127.5 150 52.7
Potri.019G069000 Populus trichocarpa HOM05D003883 ORTHO05D004605 2.2e-27 127.1 163 53.4
Peaxi162Scf00078g00928 Petunia axillaris HOM05D003883 ORTHO05D004605 4.8e-27 125.9 179 46.9
SHI51464 Sapria himalayana HOM05D003883 ORTHO05D004605 8.2e-27 125.2 106 68.9
Manes.18G112700 Manihot esculenta HOM05D003883 ORTHO05D004605 1.1e-26 124.8 125 59.2
QL09p001675 Quercus lobata HOM05D003883 ORTHO05D004605 1.1e-26 124.8 171 48.0
Sabra19G0082500 Salix brachista HOM05D003883 ORTHO05D004605 1.1e-26 124.8 174 50.6
Cpa.g.sc21.99 Carica papaya HOM05D003883 ORTHO05D004605 1.4e-26 124.4 171 46.2
Dinv22125 Davidia involucrata HOM05D003883 ORTHO05D004605 1.8e-26 124.0 172 47.1
Haze_13971 Corylus avellana HOM05D003883 ORTHO05D004605 5.3e-26 122.5 171 46.8
Lalb_Chr02g0141881 Lupinus albus HOM05D003883 ORTHO05D004605 5.3e-26 122.5 162 49.4
FAN06G0896 Fragaria x ananassa HOM05D003883 ORTHO05D004605 1.5e-25 120.9 165 47.3
Gorai.012G046700 Gossypium raimondii HOM05D003883 ORTHO05D004605 1.5e-25 120.9 162 47.5
Lj5g0005523 Lotus japonicus HOM05D003883 ORTHO05D004605 1.5e-25 120.9 167 47.9
Nitab4.5_0001202g0010 Nicotiana tabacum HOM05D003883 ORTHO05D004605 1.5e-25 120.9 181 47.0
Gohir.D04G041300 Gossypium hirsutum HOM05D003883 ORTHO05D004605 4.5e-25 119.4 162 46.9
Nitab4.5_0000009g0400 Nicotiana tabacum HOM05D003883 ORTHO05D004605 5.9e-25 119.0 180 46.1
Sed0003271 Sechium edule HOM05D003883 ORTHO05D004605 5.9e-25 119.0 168 45.2
MD10G1003200 Malus domestica HOM05D003883 ORTHO05D004605 1.0e-24 118.2 172 45.3
RcHm_v2.0_Chr6g0251031 Rosa chinensis HOM05D003883 ORTHO05D004605 1.7e-24 117.5 165 46.1
SGA_v2.0_scaffold118G32634 Striga asiatica HOM05D003883 ORTHO05D004605 1.7e-24 117.5 169 45.6
arahy.Tifrunner.gnm1.ann1.6B58CR Arachis hypogaea HOM05D003883 ORTHO05D004605 2.2e-24 117.1 166 46.4
arahy.Tifrunner.gnm1.ann1.DBA4ID Arachis hypogaea HOM05D003883 ORTHO05D004605 2.9e-24 116.7 169 46.2
Cfa008054 Carpinus fangiana HOM05D003883 ORTHO05D004605 2.9e-24 116.7 171 44.4
Glyma.20G177100 Glycine max HOM05D003883 ORTHO05D004605 2.9e-24 116.7 123 55.3
Atru.chr13.2533 Acer truncatum HOM05D003883 ORTHO05D004605 3.8e-24 116.3 167 43.7
Psat6g186320 Pisum sativum HOM05D003883 ORTHO05D004605 6.5e-24 115.5 167 45.5
Duzib147G1304 Durio zibethinus HOM05D003883 ORTHO05D004605 1.4e-23 114.4 141 52.5
Hma1.2p1_1248F.1_g270250 Hydrangea macrophylla HOM05D003883 ORTHO05D004605 1.4e-23 114.4 167 45.5
Medtr1g096170 Medicago truncatula HOM05D003883 ORTHO05D004605 1.4e-23 114.4 178 44.9
PGSC0003DMG400026862 Solanum tuberosum HOM05D003883 ORTHO05D004605 1.4e-23 114.4 149 50.3
SHI47059 Sapria himalayana HOM05D003883 ORTHO05D004605 1.9e-23 114.0 92 69.6
Phvul.007G091200 Phaseolus vulgaris HOM05D003883 ORTHO05D004605 2.5e-23 113.6 124 54.8
Eucgr.F02940 Eucalyptus grandis HOM05D003883 ORTHO05D004605 3.2e-23 113.2 173 46.2
ClCG08G001170 Citrullus lanatus HOM05D003883 ORTHO05D004605 5.5e-23 112.5 169 45.6
VMungo0720G2352 Vigna mungo HOM05D003883 ORTHO05D004605 5.5e-23 112.5 167 45.5
MSTRG.25500 Avicennia marina HOM05D003883 ORTHO05D004605 9.4e-23 111.7 147 51.7
FvH4_2g00580 Fragaria vesca HOM05D003883 ORTHO05D004605 9.4e-23 111.7 165 45.5
FAN20G1119 Fragaria x ananassa HOM05D003883 ORTHO05D004605 9.4e-23 111.7 150 49.3
SHI53701 Sapria himalayana HOM05D003883 ORTHO05D004605 1.6e-22 110.9 71 78.9
TAR633G0350 Trochodendron aralioides HOM05D003883 ORTHO05D004605 1.6e-22 110.9 162 43.8
CSS0035251 Camellia sinensis var. sinensis HOM05D003883 ORTHO05D004605 2.1e-22 110.5 167 46.7
MELO3C033524.2 Cucumis melo HOM05D003883 ORTHO05D004605 2.1e-22 110.5 142 50.7
Nn5g27336 Nelumbo nucifera HOM05D003883 ORTHO05D004605 2.1e-22 110.5 167 41.9
Hund26941 Selenicereus undatus HOM05D003883 ORTHO05D004605 2.1e-22 110.5 97 62.9
AT4G10110 Arabidopsis thaliana HOM05D003883 ORTHO05D004605 2.7e-22 110.2 79 70.9
BcaB01g01452 Brassica carinata HOM05D003883 ORTHO05D004605 2.7e-22 110.2 79 72.2
Cc10_g16020 Coffea canephora HOM05D003883 ORTHO05D004605 2.7e-22 110.2 157 47.8
FAN27G2158 Fragaria x ananassa HOM05D003883 ORTHO05D004605 2.7e-22 110.2 165 44.8
MBI03_g20879_MAGBIO Magnolia biondii HOM05D003883 ORTHO05D004605 3.6e-22 109.8 124 51.6
Aa31LG9G11890 Aethionema arabicum HOM05D003883 ORTHO05D004605 6.1e-22 109.0 78 70.5
CsaV3_5G039780 Cucumis sativus L. HOM05D003883 ORTHO05D004605 6.1e-22 109.0 171 46.2
BcaC04g21018 Brassica carinata HOM05D003883 ORTHO05D004605 7.9e-22 108.6 79 70.9
C09p36620 Brassica napus HOM05D003883 ORTHO05D004605 7.9e-22 108.6 79 70.9
BolC9t56494H Brassica oleracea HOM05D003883 ORTHO05D004605 7.9e-22 108.6 79 70.9
Gohir.A05G374200 Gossypium hirsutum HOM05D003883 ORTHO05D004605 7.9e-22 108.6 113 54.9
Sopen11g016790 Solanum pennellii HOM05D003883 ORTHO05D004605 7.9e-22 108.6 126 54.0
Ah.05g170410 Amaranthus hybridus HOM05D003883 ORTHO05D004605 1.0e-21 108.2 172 43.0
Aqoxy5G01863 Aquilegia oxysepala HOM05D003883 ORTHO05D004605 1.0e-21 108.2 163 43.6
HanXRQChr05g0150991 Helianthus annuus HOM05D003883 ORTHO05D004605 1.0e-21 108.2 136 50.7
AL6G43920 Arabidopsis lyrata HOM05D003883 ORTHO05D004605 1.4e-21 107.8 78 70.5
Cc10_g13970 Coffea canephora HOM05D003883 ORTHO05D004605 1.4e-21 107.8 157 47.1
A09p28820 Brassica napus HOM05D003883 ORTHO05D004605 1.8e-21 107.5 79 69.6
BraA09t38444Z Brassica rapa HOM05D003883 ORTHO05D004605 1.8e-21 107.5 79 69.6
COL.COLO4_25136 Corchorus olitorius HOM05D003883 ORTHO05D004605 1.8e-21 107.5 159 48.4
GSVIVG01011528001 Vitis vinifera HOM05D003883 ORTHO05D004605 1.8e-21 107.5 175 41.1
Sp6g07310 Schrenkiella parvula HOM05D003883 ORTHO05D004605 2.3e-21 107.1 78 70.5
Ca_10599_v3 Cicer arietinum L. HOM05D003883 ORTHO05D004605 3.0e-21 106.7 181 42.5
Solyc11g039950.3 Solanum lycopersicum HOM05D003883 ORTHO05D004605 3.0e-21 106.7 79 70.9
THA.LOC104815789 Tarenaya hassleriana HOM05D003883 ORTHO05D004605 3.9e-21 106.3 76 69.7
EL10Ac1g01277 Beta vulgaris HOM05D003883 ORTHO05D004605 5.1e-21 105.9 121 51.2
TPR.G1761 Trifolium pratense HOM05D003883 ORTHO05D004605 5.1e-21 105.9 176 43.8
Thhalv10029015m.g Eutrema salsugineum HOM05D003883 ORTHO05D004605 6.7e-21 105.5 76 71.1
Lsat_1_v5_gn_6_111041 Lactuca sativa HOM05D003883 ORTHO05D004605 6.7e-21 105.5 96 62.5
AUR62038537 Chenopodium quinoa HOM05D003883 ORTHO05D004605 8.8e-21 105.1 116 50.0
SHI53439 Sapria himalayana HOM05D003883 ORTHO05D004605 8.8e-21 105.1 93 62.4
AUR62013386 Chenopodium quinoa HOM05D003883 ORTHO05D004605 1.5e-20 104.4 118 50.8
Migut.C01393 Erythranthe guttata HOM05D003883 ORTHO05D004605 1.5e-20 104.4 163 45.4
CARHR261150 Cardamine hirsuta HOM05D003883 ORTHO05D004605 2.6e-20 103.6 76 68.4
SHI20281 Sapria himalayana HOM05D003883 ORTHO05D004605 2.6e-20 103.6 153 45.1
Sc10g0006520 Simmondsia chinensis HOM05D003883 ORTHO05D004605 2.6e-20 103.6 161 43.5
HanXRQChr12g0369281 Helianthus annuus HOM05D003883 ORTHO05D004605 3.3e-20 103.2 88 61.4
Lsat_1_v5_gn_1_24520 Lactuca sativa HOM05D005117 ORTHO05D005956 3.3e-20 103.2 76 68.4
SalBow7G2433 Salvia bowleyana HOM05D003883 ORTHO05D004605 3.3e-20 103.2 74 70.3
PSO761G0643 Papaver somniferum HOM05D003883 ORTHO05D004605 4.3e-20 102.8 110 53.6
Ciclev10022415m.g Citrus clementina HOM05D003883 ORTHO05D004605 5.7e-20 102.4 168 42.3
Os05g0427300 Oryza sativa ssp. japonica HOM05D003883 ORTHO05D004605 5.7e-20 102.4 129 47.3
Rhsim02G0081700 Rhododendron simsii HOM05D003883 ORTHO05D004605 5.7e-20 102.4 158 45.6
Sed0024898 Sechium edule HOM05D003883 ORTHO05D004605 5.7e-20 102.4 123 51.2
PSO210G0567 Papaver somniferum HOM05D003883 ORTHO05D004605 7.4e-20 102.1 161 43.5
Actinidia29370 Actinidia chinensis HOM05D003883 ORTHO05D004605 9.7e-20 101.7 161 43.5
PGR042G1493 Punica granatum HOM05D003883 ORTHO05D004605 9.7e-20 101.7 174 43.1
Lj7P418T16 Lonicera japonica HOM05D003883 ORTHO05D004605 1.3e-19 101.3 76 67.1
CANSAT01G1230 Cannabis sativa HOM05D003883 ORTHO05D004605 1.7e-19 100.9 125 51.2
SHI54185 Sapria himalayana HOM05D003883 ORTHO05D004605 2.8e-19 100.1 71 73.2
DCAR_001170 Daucus carota HOM05D003883 ORTHO05D004605 3.7e-19 99.8 167 44.3
ECA246G4775 Erigeron canadensis HOM05D003883 ORTHO05D004605 3.7e-19 99.8 157 44.6
Oeu028627.2 Olea europaea HOM05D003883 ORTHO05D004605 3.7e-19 99.8 188 42.0
CsaV3_5G039770 Cucumis sativus L. HOM05D003883 ORTHO05D004605 4.8e-19 99.4 166 43.4
MELO3C022158.2 Cucumis melo HOM05D003883 ORTHO05D004605 8.2e-19 98.6 91 59.3
SHI37949 Sapria himalayana HOM05D003883 ORTHO05D004605 8.2e-19 98.6 122 49.2
ClCG08G000830 Citrullus lanatus HOM05D003883 ORTHO05D004605 1.4e-18 97.8 71 70.4
DCAR_010106 Daucus carota HOM05D003883 ORTHO05D004605 3.1e-18 96.7 167 43.7
MBI10_g20271_MAGBIO Magnolia biondii HOM05D003883 ORTHO05D004605 5.3e-18 95.9 128 44.5
HPP92_004500 Vanilla planifolia HOM05D003883 ORTHO05D004605 4.5e-17 92.8 94 54.3
SEGI_10411 Sequoiadendron giganteum HOM05D003883 ORTHO05D004605 1.0e-16 91.7 150 40.7
MBI17_g19026_MAGBIO Magnolia biondii HOM05D003883 ORTHO05D004605 1.3e-16 91.3 82 52.4
DCAR_027538 Daucus carota HOM05D003883 ORTHO05D004605 1.7e-16 90.9 71 62.0
Nitab4.5_0005094g0010 Nicotiana tabacum HOM05D003883 ORTHO05D004605 3.8e-16 89.7 69 66.7
Zm00001eb145960 Zea mays HOM05D003883 ORTHO05D004605 6.5e-16 89.0 176 40.3
SHI47009 Sapria himalayana HOM05D003883 ORTHO05D004605 8.5e-16 88.6 62 74.2
unitig_749.g13869 Utricularia gibba HOM05D003883 ORTHO05D004605 1.1e-15 88.2 171 35.1
CDE04G3585 Ceratophyllum demersum HOM05D003883 ORTHO05D004605 3.2e-15 86.7 134 42.5
SHI11547 Sapria himalayana HOM05D003883 ORTHO05D000093 4.2e-15 86.3 113 50.4
Carub.0006s2868 Capsella rubella HOM05D003883 ORTHO05D004605 9.4e-15 85.1 94 53.2
Solyc10g081990.1 Solanum lycopersicum HOM05D003883 ORTHO05D004605 2.7e-14 83.6 71 59.2
AagrBONN_evm.TU.Sc2ySwM_228.826 Anthoceros agrestis HOM05D003883 ORTHO05D004605 7.9e-14 82.0 76 50.0
MBI18_g04721_MAGBIO Magnolia biondii HOM05D003883 ORTHO05D004605 7.9e-14 82.0 86 51.2
Lsat_1_v5_gn_8_63781 Lactuca sativa HOM05D003883 ORTHO05D004605 2.3e-13 80.5 75 57.3
SEGI_14755 Sequoiadendron giganteum HOM05D003883 ORTHO05D004605 1.1e-12 78.2 74 48.6
Mapoly0019s0080 Marchantia polymorpha HOM05D003883 ORTHO05D004605 2.6e-12 77.0 149 35.6
SMO239G0046 Selaginella moellendorffii HOM05D003883 ORTHO05D004605 5.7e-12 75.9 76 44.7
SMO307G0014 Selaginella moellendorffii HOM05D003883 ORTHO05D004605 5.7e-12 75.9 76 44.7
CBR_g955 Chara braunii HOM05D003883 ORTHO05D004605 2.2e-11 73.9 75 42.7
CDE02G3110 Ceratophyllum demersum HOM05D003883 ORTHO05D004605 2.4e-10 70.5 61 57.4
ATR1089G108 Amborella trichopoda HOM05D003883 ORTHO05D004605 5.9e-09 65.9 99 41.4
RcHm_v2.0_Chr6g0280021 Rosa chinensis HOM05D003883 ORTHO05D004605 1.7e-08 64.3 99 43.4
FAN11G1445 Fragaria x ananassa HOM05D003883 ORTHO05D004605 1.9e-07 60.8 50 62.0
SHI15545 Sapria himalayana HOM05D000616 ORTHO05D000062 2.5e-07 60.5 36 83.3
FvH4_3g25440 Fragaria vesca HOM05D003883 ORTHO05D004605 9.4e-07 58.5 44 61.4
Lsat_1_v5_gn_7_27180 Lactuca sativa HOM05D003995 ORTHO05D004605 2.1e-06 57.4 54 50.0
SHI33600 Sapria himalayana HOM05D003883 ORTHO05D010069 4.7e-06 56.2 62 56.5


User provided reference genes

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