Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI46084 Sapria himalayana HOM05D000849 ORTHO05D003989 4.0e-57 224.6 115 100.0
SHI50198 Sapria himalayana HOM05D000849 ORTHO05D003989 5.6e-35 151.0 102 78.4
SHI42703 Sapria himalayana HOM05D000849 ORTHO05D003989 3.4e-32 141.7 88 84.1
SHI47843 Sapria himalayana HOM05D000849 ORTHO05D003989 7.6e-32 140.6 81 85.2
SHI34965 Sapria himalayana HOM05D000849 ORTHO05D003989 1.7e-31 139.4 76 89.5
SHI38667 Sapria himalayana HOM05D000849 ORTHO05D003989 2.9e-31 138.7 81 87.7
SHI53541 Sapria himalayana HOM05D000849 ORTHO05D003989 6.7e-28 127.5 84 78.6
SHI53653 Sapria himalayana HOM05D000849 ORTHO05D003989 6.7e-28 127.5 84 78.6
SHI33029 Sapria himalayana HOM05D000849 ORTHO05D003989 3.1e-25 118.6 79 77.2
SHI52623 Sapria himalayana HOM05D000849 ORTHO05D003989 1.2e-24 116.7 75 80.0
SHI20141 Sapria himalayana HOM05D000849 ORTHO05D003989 2.7e-21 105.5 109 57.8
SHI43632 Sapria himalayana HOM05D000558 ORTHO05D001857 6.1e-21 104.4 93 63.4
SHI49175 Sapria himalayana HOM05D000849 ORTHO05D003989 6.7e-20 100.9 88 62.5
SHI40238 Sapria himalayana HOM05D010923 ORTHO05D003989 1.1e-17 93.6 114 53.5
SHI35260 Sapria himalayana HOM05D000558 ORTHO05D001857 6.9e-17 90.9 49 89.8
Hma1.2p1_0663F.1_g198540 Hydrangea macrophylla HOM05D000849 ORTHO05D003989 7.2e-14 80.9 69 60.9
PSO063G4962 Papaver somniferum HOM05D000849 ORTHO05D003989 4.6e-13 78.2 64 60.9
PSO782G5042 Papaver somniferum HOM05D000849 ORTHO05D003989 4.6e-13 78.2 64 60.9
HPP92_024117 Vanilla planifolia HOM05D000849 ORTHO05D003989 4.6e-13 78.2 64 62.5
Atru.chr7.1508 Acer truncatum HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
Ah.09g230330 Amaranthus hybridus HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
Aqoxy7G03958 Aquilegia oxysepala HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 60.9
EL10Ac8g18347 Beta vulgaris HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
CAN.G1058.10 Capsicum annuum HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
Cpa.g.sc78.44 Carica papaya HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
CiPaw.03G221100 Carya illinoinensis HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
CiPaw.04G154300 Carya illinoinensis HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
CDE05G3423 Ceratophyllum demersum HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
AUR62033272 Chenopodium quinoa HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
ClCG03G015970 Citrullus lanatus HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
Ciclev10009831m.g Citrus clementina HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
Haze_25852 Corylus avellana HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
MELO3C015429.2 Cucumis melo HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
CsaV3_1G039990 Cucumis sativus L. HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
Dinv42272 Davidia involucrata HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
Duzib150G0327 Durio zibethinus HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
Duzib187G0631 Durio zibethinus HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
Eucgr.C00951 Eucalyptus grandis HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
FAN28G0398 Fragaria x ananassa HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
Gohir.A05G027200 Gossypium hirsutum HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
Gohir.A13G194600 Gossypium hirsutum HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
Gohir.D05G029100 Gossypium hirsutum HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
Gohir.D13G200300 Gossypium hirsutum HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
Gorai.009G029200 Gossypium raimondii HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
Gorai.013G229100 Gossypium raimondii HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
MD02G1069000 Malus domestica HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
MD15G1200600 Malus domestica HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
Manes.16G106500 Manihot esculenta HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
Peaxi162Scf00298g00114 Petunia axillaris HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
Phvul.002G306700 Phaseolus vulgaris HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
Prupe.7G216600 Prunus persica HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
PGR142G0605 Punica granatum HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
QL02p086970 Quercus lobata HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
RcHm_v2.0_Chr2g0092321 Rosa chinensis HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
Sabra06G0117900 Salix brachista HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
Sed0020746 Sechium edule HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
Hund26299 Selenicereus undatus HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
Sc08g0008140 Simmondsia chinensis HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
Thecc.09G096900 Theobroma cacao HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
TWI63G0367 Tripterygium wilfordii HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
VMungo0251G1053 Vigna mungo HOM05D000849 ORTHO05D003989 7.9e-13 77.4 64 62.5
CDE05G2264 Ceratophyllum demersum HOM05D000849 ORTHO05D003989 1.0e-12 77.0 64 60.9
FvH4_1g06580 Fragaria vesca HOM05D000849 ORTHO05D003989 1.0e-12 77.0 64 60.9
FAN19G1758 Fragaria x ananassa HOM05D000849 ORTHO05D003989 1.0e-12 77.0 64 60.9
FAN26G0314 Fragaria x ananassa HOM05D000849 ORTHO05D003989 1.0e-12 77.0 64 60.9
FAN26G0318 Fragaria x ananassa HOM05D000849 ORTHO05D003989 1.0e-12 77.0 64 60.9
Manes.03G029400 Manihot esculenta HOM05D000849 ORTHO05D003989 1.0e-12 77.0 64 60.9
Nn8g39010 Nelumbo nucifera HOM05D000849 ORTHO05D003989 1.0e-12 77.0 64 60.9
Os10g0368400 Oryza sativa ssp. japonica HOM05D000849 ORTHO05D003989 1.0e-12 77.0 64 60.9
Potri.006G149100 Populus trichocarpa HOM05D000849 ORTHO05D003989 1.0e-12 77.0 64 60.9
TAR636G1139 Trochodendron aralioides HOM05D000849 ORTHO05D003989 1.0e-12 77.0 64 60.9
MBI04_g06989_MAGBIO Magnolia biondii HOM05D000849 ORTHO05D003989 1.4e-12 76.6 64 59.4
PSO210G7720 Papaver somniferum HOM05D000849 ORTHO05D003989 1.4e-12 76.6 64 59.4
AL3G48440 Arabidopsis lyrata HOM05D000849 ORTHO05D003989 2.3e-12 75.9 64 60.9
AT2G19790 Arabidopsis thaliana HOM05D000849 ORTHO05D003989 2.3e-12 75.9 64 60.9
BcaB03g16769 Brassica carinata HOM05D000849 ORTHO05D003989 2.3e-12 75.9 64 60.9
BcaC04g22820 Brassica carinata HOM05D000849 ORTHO05D003989 2.3e-12 75.9 64 60.9
BcaC06g36622 Brassica carinata HOM05D000849 ORTHO05D003989 2.3e-12 75.9 64 60.9
A07p00920 Brassica napus HOM05D000849 ORTHO05D003989 2.3e-12 75.9 64 60.9
A09p12580 Brassica napus HOM05D000849 ORTHO05D003989 2.3e-12 75.9 64 60.9
C07p02080 Brassica napus HOM05D000849 ORTHO05D003989 2.3e-12 75.9 64 60.9
C09p14940 Brassica napus HOM05D000849 ORTHO05D003989 2.3e-12 75.9 64 60.9
BolC7t40613H Brassica oleracea HOM05D000849 ORTHO05D003989 2.3e-12 75.9 64 60.9
BolC9t54396H Brassica oleracea HOM05D000849 ORTHO05D003989 2.3e-12 75.9 64 60.9
BraA07t27892Z Brassica rapa HOM05D000849 ORTHO05D003989 2.3e-12 75.9 64 60.9
BraA09t36905Z Brassica rapa HOM05D000849 ORTHO05D003989 2.3e-12 75.9 64 60.9
CSS0012070 Camellia sinensis var. sinensis HOM05D000849 ORTHO05D003989 2.3e-12 75.9 64 60.9
Carub.0003s3407 Capsella rubella HOM05D000849 ORTHO05D003989 2.3e-12 75.9 64 60.9
CARHR110250 Cardamine hirsuta HOM05D000849 ORTHO05D003989 2.3e-12 75.9 64 60.9
Cc06_g10770 Coffea canephora HOM05D000849 ORTHO05D003989 2.3e-12 75.9 64 60.9
ECA236G3815 Erigeron canadensis HOM05D000849 ORTHO05D003989 2.3e-12 75.9 64 60.9
Lsat_1_v5_gn_8_88280 Lactuca sativa HOM05D000849 ORTHO05D003989 2.3e-12 75.9 64 60.9
Nitab4.5_0004180g0010 Nicotiana tabacum HOM05D000849 ORTHO05D003989 2.3e-12 75.9 64 60.9
Oeu036246.1 Olea europaea HOM05D000849 ORTHO05D003989 2.3e-12 75.9 64 60.9
Rhsim03G0235600 Rhododendron simsii HOM05D000849 ORTHO05D003989 2.3e-12 75.9 64 60.9
Sp3g33140 Schrenkiella parvula HOM05D000849 ORTHO05D003989 2.3e-12 75.9 64 60.9
vmacro06264 Vaccinium macrocarpon HOM05D000849 ORTHO05D003989 2.3e-12 75.9 64 60.9
HPP92_009846 Vanilla planifolia HOM05D000849 ORTHO05D003989 2.3e-12 75.9 64 60.9
arahy.Tifrunner.gnm1.ann1.URAI8Z Arachis hypogaea HOM05D000849 ORTHO05D003989 3.0e-12 75.5 64 60.9
arahy.Tifrunner.gnm1.ann1.XR2T8G Arachis hypogaea HOM05D000849 ORTHO05D003989 3.0e-12 75.5 64 60.9
MSTRG.19541 Avicennia marina HOM05D000849 ORTHO05D003989 3.0e-12 75.5 64 59.4
Migut.K00562 Erythranthe guttata HOM05D000849 ORTHO05D003989 3.0e-12 75.5 64 59.4
Glyma.01G005300 Glycine max HOM05D000849 ORTHO05D003989 3.0e-12 75.5 64 60.9
Glyma.07G126300 Glycine max HOM05D000849 ORTHO05D003989 3.0e-12 75.5 64 60.9
Lalb_Chr14g0375221 Lupinus albus HOM05D000849 ORTHO05D003989 3.0e-12 75.5 64 60.9
Os08g0395300 Oryza sativa ssp. japonica HOM05D000849 ORTHO05D003989 3.0e-12 75.5 64 59.4
Phvul.004G173800 Phaseolus vulgaris HOM05D000849 ORTHO05D003989 3.0e-12 75.5 64 60.9
SHI34978 Sapria himalayana HOM05D000849 ORTHO05D003989 3.0e-12 75.5 48 83.3
unitig_26.g9704 Utricularia gibba HOM05D000849 ORTHO05D003989 3.0e-12 75.5 64 59.4
VMungo0464G2126 Vigna mungo HOM05D000849 ORTHO05D003989 3.0e-12 75.5 64 60.9
SGA_v2.0_scaffold279G46782 Striga asiatica HOM05D000849 ORTHO05D003989 3.9e-12 75.1 64 57.8
SGA_v2.0_scaffold302G47808 Striga asiatica HOM05D000849 ORTHO05D003989 3.9e-12 75.1 64 57.8
Zm00001eb178620 Zea mays HOM05D000849 ORTHO05D003989 3.9e-12 75.1 64 59.4
Actinidia29881 Actinidia chinensis HOM05D000849 ORTHO05D003989 5.1e-12 74.7 59 66.1
ATR0705G079 Amborella trichopoda HOM05D000849 ORTHO05D003989 5.1e-12 74.7 64 59.4
MSTRG.6030 Avicennia marina HOM05D000849 ORTHO05D003989 5.1e-12 74.7 64 56.2
PSO210G0713 Papaver somniferum HOM05D000849 ORTHO05D003989 5.1e-12 74.7 64 57.8
PSO832G0835 Papaver somniferum HOM05D000849 ORTHO05D003989 5.1e-12 74.7 64 57.8
Aa31LG8G16770 Aethionema arabicum HOM05D000849 ORTHO05D003989 6.7e-12 74.3 64 59.4
Lj4g0006741 Lotus japonicus HOM05D000849 ORTHO05D003989 6.7e-12 74.3 64 60.9
DCAR_028635 Daucus carota HOM05D000849 ORTHO05D003989 8.8e-12 73.9 68 55.9
THA.LOC104820037 Tarenaya hassleriana HOM05D000849 ORTHO05D003989 8.8e-12 73.9 64 59.4
Ca_17379_v3 Cicer arietinum L. HOM05D000849 ORTHO05D003989 1.1e-11 73.6 64 62.5
HanXRQChr09g0238561 Helianthus annuus HOM05D000849 ORTHO05D003989 1.1e-11 73.6 64 59.4
Medtr7g100010 Medicago truncatula HOM05D000849 ORTHO05D003989 1.1e-11 73.6 64 62.5
Medtr8g102180 Medicago truncatula HOM05D000849 ORTHO05D003989 1.1e-11 73.6 64 62.5
Psat7g018560 Pisum sativum HOM05D000849 ORTHO05D003989 1.1e-11 73.6 64 62.5
Solyc05g026130.3 Solanum lycopersicum HOM05D000849 ORTHO05D003989 1.1e-11 73.6 64 59.4
Sopen05g022340 Solanum pennellii HOM05D000849 ORTHO05D003989 1.1e-11 73.6 64 59.4
PGSC0003DMG400028942 Solanum tuberosum HOM05D000849 ORTHO05D003989 1.1e-11 73.6 64 59.4
THA.LOC104814582 Tarenaya hassleriana HOM05D000849 ORTHO05D003989 1.1e-11 73.6 64 57.8
TPR.G34776 Trifolium pratense HOM05D000849 ORTHO05D003989 1.1e-11 73.6 64 62.5
Aqoxy7G01359 Aquilegia oxysepala HOM05D000849 ORTHO05D003989 1.5e-11 73.2 64 60.9
Lj2g0010400 Lotus japonicus HOM05D000849 ORTHO05D003989 1.5e-11 73.2 64 59.4
SEGI_24636 Sequoiadendron giganteum HOM05D000849 ORTHO05D003989 1.5e-11 73.2 64 56.2
Actinidia17501 Actinidia chinensis HOM05D000849 ORTHO05D003989 2.0e-11 72.8 64 56.2
FvH4_5g22770 Fragaria vesca HOM05D000849 ORTHO05D003989 2.5e-11 72.4 64 57.8
FAN08G2450 Fragaria x ananassa HOM05D000849 ORTHO05D003989 2.5e-11 72.4 64 57.8
FAN18G0868 Fragaria x ananassa HOM05D000849 ORTHO05D003989 2.5e-11 72.4 64 57.8
GSVIVG01015270001 Vitis vinifera HOM05D000849 ORTHO05D003989 2.5e-11 72.4 64 59.4
SHI36761 Sapria himalayana HOM05D010923 ORTHO05D003989 9.7e-11 70.5 45 77.8
PGR102G1239 Punica granatum HOM05D000849 ORTHO05D003989 1.3e-10 70.1 64 57.8
Mapoly0016s0005 Marchantia polymorpha HOM05D000849 ORTHO05D003989 2.8e-10 68.9 64 54.7
SMO196G0114 Selaginella moellendorffii HOM05D000849 ORTHO05D003989 3.7e-10 68.6 64 53.1
Pp3c14_14670 Physcomitrium patens HOM05D000849 ORTHO05D003989 4.8e-10 68.2 64 53.1
Thhalv10002117m.g Eutrema salsugineum HOM05D000849 ORTHO05D003989 2.4e-09 65.9 59 57.6
CBR_g2797 Chara braunii HOM05D000849 ORTHO05D003989 3.1e-09 65.5 64 53.1
SHI52965 Sapria himalayana HOM05D000849 ORTHO05D003989 3.1e-09 65.5 46 71.7
SHI51537 Sapria himalayana HOM05D000849 ORTHO05D003989 1.2e-08 63.5 37 81.1
Cre07.g330950 Chlamydomonas reinhardtii HOM05D000849 ORTHO05D003989 1.5e-08 63.2 64 51.6
SHI50902 Sapria himalayana HOM05D010923 ORTHO05D003989 3.4e-08 62.0 37 78.4
Glyma.08G031600 Glycine max HOM05D000849 ORTHO05D003989 4.5e-08 61.6 59 57.6
SHI52725 Sapria himalayana HOM05D000849 ORTHO05D003989 1.0e-07 60.5 36 80.6
SHI36351 Sapria himalayana HOM05D010923 ORTHO05D003989 3.8e-07 58.5 29 93.1
SHI52555 Sapria himalayana HOM05D000849 ORTHO05D003989 5.0e-07 58.2 29 89.7
SHI53623 Sapria himalayana HOM05D000849 ORTHO05D003989 5.0e-07 58.2 29 89.7
SHI33597 Sapria himalayana HOM05D000849 ORTHO05D003989 8.5e-07 57.4 38 71.1
MCO15G266 Micromonas commoda HOM05D000849 ORTHO05D003989 1.1e-06 57.0 64 45.3
SHI49839 Sapria himalayana HOM05D010923 ORTHO05D003989 1.1e-06 57.0 29 89.7
SHI40091 Sapria himalayana HOM05D010923 ORTHO05D367824 4.2e-06 55.1 28 89.3
SHI03952 Sapria himalayana HOM05D000849 ORTHO05D003989 7.2e-06 54.3 41 65.9
SHI48305 Sapria himalayana HOM05D000849 ORTHO05D003989 7.2e-06 54.3 100 41.0
Migut.J01079 Erythranthe guttata HOM05D000849 ORTHO05D003989 9.4e-06 53.9 121 33.1
SHI13831 Sapria himalayana HOM05D000849 ORTHO05D003989 9.4e-06 53.9 48 60.4
SHI42924 Sapria himalayana HOM05D010923 ORTHO05D003989 9.4e-06 53.9 38 71.1


User provided reference genes

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