Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI45393 Sapria himalayana HOM05D001560 ORTHO05D004675 3.2e-130 468.4 230 100.0
SHI35231 Sapria himalayana HOM05D001560 ORTHO05D004675 2.6e-95 352.4 276 68.8
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 3.7e-94 348.6 277 68.2
SHI51143 Sapria himalayana HOM05D001560 ORTHO05D004675 5.3e-93 344.7 280 66.4
SHI36380 Sapria himalayana HOM05D001560 ORTHO05D004675 2.5e-90 335.9 283 64.7
SHI33931 Sapria himalayana HOM05D001560 ORTHO05D004675 1.5e-87 326.6 278 66.2
SHI37085 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-85 319.7 259 66.0
SHI35188 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-78 296.2 249 64.7
SHI36971 Sapria himalayana HOM05D001560 ORTHO05D004675 2.4e-77 292.7 261 62.1
SHI39097 Sapria himalayana HOM05D001560 ORTHO05D004675 8.0e-73 277.7 254 61.4
SHI36583 Sapria himalayana HOM05D001560 ORTHO05D004675 5.7e-71 271.6 315 52.7
SHI49196 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-70 269.6 221 65.6
SHI26652 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-61 240.7 151 80.1
SHI36016 Sapria himalayana HOM05D001560 ORTHO05D004675 2.3e-59 233.0 214 59.8
SHI36139 Sapria himalayana HOM05D001560 ORTHO05D004675 6.6e-59 231.5 202 63.9
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 4.4e-55 218.8 262 50.4
SHI36775 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-52 210.7 159 69.2
SHI36786 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-52 210.7 159 69.2
SHI35320 Sapria himalayana HOM05D001560 ORTHO05D004675 4.6e-52 208.8 100 96.0
SHI37162 Sapria himalayana HOM05D001560 ORTHO05D004675 6.0e-52 208.4 235 52.8
SHI47572 Sapria himalayana HOM05D001560 ORTHO05D004675 6.0e-52 208.4 216 56.9
SHI35288 Sapria himalayana HOM05D001560 ORTHO05D004675 3.0e-51 206.1 216 55.6
SHI54579 Sapria himalayana HOM05D001560 ORTHO05D004675 7.3e-50 201.4 100 94.0
SHI43258 Sapria himalayana HOM05D001560 ORTHO05D004675 2.1e-49 199.9 200 56.5
SHI48979 Sapria himalayana HOM05D001560 ORTHO05D004675 6.2e-49 198.4 95 94.7
Migut.D01524 Erythranthe guttata HOM05D001560 ORTHO05D004675 2.6e-47 193.0 100 90.0
Aa31csc239G40 Aethionema arabicum HOM05D001560 ORTHO05D004675 3.4e-47 192.6 100 90.0
BcaC09g49590 Brassica carinata HOM05D001560 ORTHO05D004675 3.4e-47 192.6 100 90.0
BolSC28t60362H Brassica oleracea HOM05D001560 ORTHO05D004675 3.4e-47 192.6 100 90.0
BraSC48t46349Z Brassica rapa HOM05D001560 ORTHO05D004675 3.4e-47 192.6 100 90.0
Thhalv10022839m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 3.4e-47 192.6 100 90.0
Sp3g25870 Schrenkiella parvula HOM05D001560 ORTHO05D004675 3.4e-47 192.6 100 90.0
ECA039G0015 Erigeron canadensis HOM05D001560 ORTHO05D004675 4.4e-47 192.2 100 90.0
ECA039G0026 Erigeron canadensis HOM05D001560 ORTHO05D004675 4.4e-47 192.2 100 90.0
ECA041G0003 Erigeron canadensis HOM05D001560 ORTHO05D004675 4.4e-47 192.2 100 90.0
ECA238G3729 Erigeron canadensis HOM05D001560 ORTHO05D004675 4.4e-47 192.2 100 90.0
ATMG00070 Arabidopsis thaliana HOM05D001560 ORTHO05D004675 7.5e-47 191.4 100 89.0
CARHR282620 Cardamine hirsuta HOM05D001560 ORTHO05D004675 7.5e-47 191.4 100 89.0
CARHR287160 Cardamine hirsuta HOM05D001560 ORTHO05D004675 9.8e-47 191.0 99 89.9
SHI36269 Sapria himalayana HOM05D001560 ORTHO05D004675 9.8e-47 191.0 221 55.7
SHI36570 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-46 190.7 117 83.8
CANSAT16G0009 Cannabis sativa HOM05D001560 ORTHO05D004675 1.7e-46 190.3 100 89.0
Thhalv10002997m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 1.7e-46 190.3 100 89.0
Potri.013G066660 Populus trichocarpa HOM05D001560 ORTHO05D004675 2.2e-46 189.9 100 88.0
CsaV3_UNG210330 Cucumis sativus L. HOM05D001560 ORTHO05D004675 2.9e-46 189.5 100 89.0
LjContig00439g0006307 Lotus japonicus HOM05D001560 ORTHO05D004675 2.9e-46 189.5 100 89.0
LjContig00446g0014136 Lotus japonicus HOM05D001560 ORTHO05D004675 2.9e-46 189.5 100 89.0
Lalb_Chr00c21g0406161 Lupinus albus HOM05D001560 ORTHO05D004675 2.9e-46 189.5 100 89.0
Lalb_Chr00c39g0409121 Lupinus albus HOM05D001560 ORTHO05D004675 2.9e-46 189.5 100 89.0
Lalb_Chr00c39g0409261 Lupinus albus HOM05D001560 ORTHO05D004675 2.9e-46 189.5 100 89.0
Lalb_Chr00c51g0413181 Lupinus albus HOM05D001560 ORTHO05D004675 2.9e-46 189.5 100 89.0
SalBow1G1852 Salvia bowleyana HOM05D001560 ORTHO05D004675 2.9e-46 189.5 100 89.0
Sopen00g002540 Solanum pennellii HOM05D001560 ORTHO05D004675 2.9e-46 189.5 100 89.0
Gohir.A01G022400 Gossypium hirsutum HOM05D001560 ORTHO05D004675 3.7e-46 189.1 100 89.0
HanXRQChr00c0055g0571471 Helianthus annuus HOM05D001560 ORTHO05D004675 3.7e-46 189.1 100 89.0
HanXRQChr12g0358671 Helianthus annuus HOM05D001560 ORTHO05D004675 3.7e-46 189.1 100 89.0
HanXRQMTg0579651 Helianthus annuus HOM05D001560 ORTHO05D004675 3.7e-46 189.1 100 89.0
Lj2P1224T99 Lonicera japonica HOM05D001560 ORTHO05D004675 3.7e-46 189.1 100 89.0
Lj2P1227T100 Lonicera japonica HOM05D001560 ORTHO05D004675 3.7e-46 189.1 100 89.0
unitig_87.g28016 Utricularia gibba HOM05D001560 ORTHO05D004675 3.7e-46 189.1 100 89.0
Actinidia34872 Actinidia chinensis HOM05D001560 ORTHO05D004675 4.9e-46 188.7 100 89.0
arahy.Tifrunner.gnm1.ann1.11DKXG Arachis hypogaea HOM05D001560 ORTHO05D004675 6.4e-46 188.3 100 88.0
arahy.Tifrunner.gnm1.ann1.HAH5KR Arachis hypogaea HOM05D001560 ORTHO05D004675 6.4e-46 188.3 100 88.0
Sed0020323 Sechium edule HOM05D001560 ORTHO05D004675 6.4e-46 188.3 100 88.0
SGA_v2.0_scaffold245G44645 Striga asiatica HOM05D001560 ORTHO05D004675 6.4e-46 188.3 100 88.0
BcaC09g49591 Brassica carinata HOM05D001560 ORTHO05D004675 8.3e-46 188.0 97 89.7
CAN.G223.15 Capsicum annuum HOM05D001560 ORTHO05D004675 8.3e-46 188.0 134 72.4
SabraMtG0007900 Salix brachista HOM05D001560 ORTHO05D004675 8.3e-46 188.0 100 88.0
Solyc00g019950.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 8.3e-46 188.0 134 72.4
Dinv29327 Davidia involucrata HOM05D001560 ORTHO05D004675 1.1e-45 187.6 99 88.9
RhsimMtG0004600 Rhododendron simsii HOM05D001560 ORTHO05D004675 1.4e-45 187.2 100 88.0
RhsimMtG0006100 Rhododendron simsii HOM05D001560 ORTHO05D004675 1.4e-45 187.2 100 88.0
RcHm_v2.0_Chr6g0257991 Rosa chinensis HOM05D001560 ORTHO05D004675 2.4e-45 186.4 100 88.0
RcHm_v2.0_MTg0498881 Rosa chinensis HOM05D001560 ORTHO05D004675 2.4e-45 186.4 100 88.0
HanXRQChr02g0035261 Helianthus annuus HOM05D001560 ORTHO05D004675 4.1e-45 185.7 100 87.0
SHI53856 Sapria himalayana HOM05D001560 ORTHO05D004675 7.0e-45 184.9 99 88.9
Ca_22175_v3 Cicer arietinum L. HOM05D001560 ORTHO05D004675 1.6e-44 183.7 95 89.5
Dinv06677 Davidia involucrata HOM05D001560 ORTHO05D004675 2.1e-44 183.3 95 89.5
Medtr0212s0080 Medicago truncatula HOM05D001560 ORTHO05D004675 2.1e-44 183.3 105 81.9
Psat7g198960 Pisum sativum HOM05D001560 ORTHO05D004675 2.1e-44 183.3 105 81.9
Zm00001eb382940 Zea mays HOM05D001560 ORTHO05D004675 2.7e-44 183.0 100 87.0
arahy.Tifrunner.gnm1.ann1.E4X7TI Arachis hypogaea HOM05D001560 ORTHO05D004675 3.5e-44 182.6 97 87.6
DCAR_031657 Daucus carota HOM05D001560 ORTHO05D004675 3.5e-44 182.6 98 87.8
DCAR_032439 Daucus carota HOM05D001560 ORTHO05D004675 3.5e-44 182.6 98 87.8
CsaV3_5G015950 Cucumis sativus L. HOM05D001560 ORTHO05D004675 1.0e-43 181.0 100 86.0
MBI05_g23323_MAGBIO Magnolia biondii HOM05D001560 ORTHO05D004675 1.0e-43 181.0 100 86.0
Ah.02g118870 Amaranthus hybridus HOM05D001560 ORTHO05D004675 1.3e-43 180.6 95 88.4
Ah.10g027950 Amaranthus hybridus HOM05D001560 ORTHO05D004675 1.3e-43 180.6 95 88.4
DCAR_032222 Daucus carota HOM05D001560 ORTHO05D004675 2.3e-43 179.9 98 86.7
Nn1g10115 Nelumbo nucifera HOM05D001560 ORTHO05D004675 5.1e-43 178.7 100 86.0
CDE02G2746 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 6.6e-43 178.3 98 85.7
CDE02G0735 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 1.5e-42 177.2 122 73.0
Ah.08g210720 Amaranthus hybridus HOM05D001560 ORTHO05D004675 1.9e-42 176.8 95 87.4
SHI42241 Sapria himalayana HOM05D001560 ORTHO05D004675 3.3e-42 176.0 100 85.0
SHI53284 Sapria himalayana HOM05D001560 ORTHO05D004675 2.8e-41 172.9 97 85.6
Cpa.g.sc38.8 Carica papaya HOM05D001560 ORTHO05D004675 4.7e-41 172.2 100 82.0
PGSC0003DMG400018984 Solanum tuberosum HOM05D001560 ORTHO05D004675 4.7e-41 172.2 99 81.8
Peaxi162Scf01588g00002 Petunia axillaris HOM05D001560 ORTHO05D004675 3.1e-40 169.5 87 89.7
Ah.10g028660 Amaranthus hybridus HOM05D001560 ORTHO05D004675 8.9e-40 167.9 89 88.8
BolC1t03442H Brassica oleracea HOM05D001560 ORTHO05D004675 1.5e-39 167.2 118 72.0
SHI37161 Sapria himalayana HOM05D000743 ORTHO05D000580 4.4e-39 165.6 121 70.2
C01p34750 Brassica napus HOM05D001560 ORTHO05D004675 4.9e-38 162.2 118 71.2
SHI39123 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-36 157.1 74 97.3
TPR.G40193 Trifolium pratense HOM05D001560 ORTHO05D004675 1.6e-36 157.1 79 89.9
BolSC28t60305H Brassica oleracea HOM05D001560 ORTHO05D004675 2.1e-36 156.8 77 90.9
SHI40902 Sapria himalayana HOM05D001560 ORTHO05D004675 6.0e-36 155.2 74 94.6
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 1.5e-34 150.6 195 48.7
SHI38033 Sapria himalayana HOM05D001560 ORTHO05D004675 1.5e-34 150.6 74 93.2
SHI40934 Sapria himalayana HOM05D001560 ORTHO05D004675 1.5e-34 150.6 255 40.4
SHI52730 Sapria himalayana HOM05D001560 ORTHO05D004675 9.5e-34 147.9 92 78.3
SHI36375 Sapria himalayana HOM05D001560 ORTHO05D004675 2.1e-33 146.7 74 91.9
SHI43451 Sapria himalayana HOM05D001560 ORTHO05D004675 3.6e-33 146.0 74 90.5
SHI51556 Sapria himalayana HOM05D001560 ORTHO05D004675 4.7e-33 145.6 71 93.0
SHI36939 Sapria himalayana HOM05D001560 ORTHO05D004675 8.1e-33 144.8 72 93.1
SHI34998 Sapria himalayana HOM05D001560 ORTHO05D003613 1.8e-32 143.7 128 63.3
SHI36081 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-32 143.7 74 90.5
SHI34631 Sapria himalayana HOM05D001560 ORTHO05D004675 2.4e-32 143.3 74 90.5
SHI27346 Sapria himalayana HOM05D001560 ORTHO05D004675 4.0e-32 142.5 71 93.0
Lsat_1_v5_gn_1_23980 Lactuca sativa HOM05D001560 ORTHO05D004675 5.2e-32 142.1 83 80.7
Gorai.001G166700 Gossypium raimondii HOM05D007877 ORTHO05D009957 6.8e-32 141.7 74 89.2
SHI34635 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-31 141.0 72 90.3
SHI36627 Sapria himalayana HOM05D001560 ORTHO05D004675 5.8e-31 138.7 70 91.4
Manes.01G049495 Manihot esculenta HOM05D001560 ORTHO05D004675 9.9e-31 137.9 79 81.0
Hma1.2p1_1099F.1_g256790 Hydrangea macrophylla HOM05D001560 ORTHO05D004675 1.3e-30 137.5 74 86.5
CAN.G134.23 Capsicum annuum HOM05D001560 ORTHO05D004675 2.9e-30 136.3 74 86.5
Gohir.A03G134200 Gossypium hirsutum HOM05D001560 ORTHO05D004675 2.9e-30 136.3 74 86.5
SHI46062 Sapria himalayana HOM05D001560 ORTHO05D004675 2.9e-30 136.3 73 86.3
SHI38213 Sapria himalayana HOM05D001560 ORTHO05D004675 3.8e-30 136.0 74 87.8
Zm00001eb436070 Zea mays HOM05D001560 ORTHO05D004675 1.1e-29 134.4 74 86.5
Zm00001eb440310 Zea mays HOM05D001560 ORTHO05D004675 1.1e-29 134.4 74 86.5
Zm00001eb440380 Zea mays HOM05D001560 ORTHO05D004675 1.1e-29 134.4 74 86.5
Zm00001eb442180 Zea mays HOM05D001560 ORTHO05D004675 1.1e-29 134.4 74 86.5
Haze_26224 Corylus avellana HOM05D001560 ORTHO05D004675 5.4e-29 132.1 122 52.5
Nitab4.5_0013170g0020 Nicotiana tabacum HOM05D001560 ORTHO05D004675 7.1e-29 131.7 72 83.3
Cre07.g327400 Chlamydomonas reinhardtii HOM05D001560 ORTHO05D004675 1.2e-28 131.0 93 63.4
SHI38099 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-28 130.6 74 85.1
AUR62042344 Chenopodium quinoa HOM05D001560 ORTHO05D004675 3.5e-28 129.4 69 87.0
Os12g0422971 Oryza sativa ssp. japonica HOM05D001560 ORTHO05D004675 1.9e-26 123.6 65 87.7
Nitab4.5_0001127g0220 Nicotiana tabacum HOM05D001560 ORTHO05D004675 7.3e-26 121.7 74 77.0
Nitab4.5_0001152g0390 Nicotiana tabacum HOM05D001560 ORTHO05D004675 2.8e-25 119.8 67 79.1
SHI50434 Sapria himalayana HOM05D001560 ORTHO05D004675 2.8e-25 119.8 63 87.3
SHI35332 Sapria himalayana HOM05D001560 ORTHO05D004675 3.1e-24 116.3 59 88.1
HanXRQChr10g0297171 Helianthus annuus HOM05D001560 ORTHO05D004675 6.9e-24 115.2 102 62.7
Nitab4.5_0001152g0360 Nicotiana tabacum HOM05D001560 ORTHO05D004675 7.6e-23 111.7 57 87.7
SHI37068 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-21 107.8 68 79.4
SHI49835 Sapria himalayana HOM05D001560 ORTHO05D004675 1.9e-21 107.1 163 43.6
SHI50380 Sapria himalayana HOM05D001560 ORTHO05D004675 1.9e-21 107.1 163 43.6
Nitab4.5_0000661g0100 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.1e-18 97.8 57 78.9
SMO053G0006 Selaginella moellendorffii HOM05D001560 ORTHO05D004675 1.5e-18 97.4 92 51.1
SHI44216 Sapria himalayana HOM05D001560 ORTHO05D004675 1.9e-18 97.1 69 69.6
SHI35323 Sapria himalayana HOM05D001560 ORTHO05D004675 7.3e-18 95.1 58 79.3
SHI39080 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-16 91.3 63 73.0
Solyc08g029250.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 1.8e-16 90.5 72 63.9
CsaV3_5G015880 Cucumis sativus L. HOM05D001560 ORTHO05D004675 1.7e-14 84.0 49 77.6
Solyc01g020470.3 Solanum lycopersicum HOM05D001560 ORTHO05D004675 1.7e-14 84.0 50 78.0
SHI33107 Sapria himalayana HOM05D001560 ORTHO05D004675 3.2e-13 79.7 48 77.1
TPR.G15690 Trifolium pratense HOM05D001560 ORTHO05D004675 9.3e-13 78.2 48 75.0
Nitab4.5_0019346g0010 Nicotiana tabacum HOM05D001560 ORTHO05D004675 4.6e-12 75.9 44 79.5
Nitab4.5_0001152g0580 Nicotiana tabacum HOM05D001560 ORTHO05D004675 2.3e-11 73.6 50 70.0
SHI38481 Sapria himalayana HOM05D001560 ORTHO05D004675 2.8e-09 66.6 37 83.8
Solyc08g065620.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 1.5e-07 60.8 55 58.2
DCAR_022732 Daucus carota HOM05D001560 ORTHO05D004675 4.5e-07 59.3 30 86.7
Nitab4.5_0003709g0080 Nicotiana tabacum HOM05D012582 ORTHO05D011721 4.5e-07 59.3 29 89.7
EL10Ac7g17432 Beta vulgaris HOM05D001560 ORTHO05D004675 6.4e-06 55.5 41 68.3


User provided reference genes

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