Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI45052 Sapria himalayana HOM05D004911 ORTHO05D005930 1.1e-89 333.2 165 100.0
SHI34912 Sapria himalayana HOM05D004911 ORTHO05D005930 4.3e-68 261.5 188 69.1
SHI50603 Sapria himalayana HOM05D004911 ORTHO05D005930 4.1e-63 245.0 165 77.6
SHI04173 Sapria himalayana HOM05D004911 ORTHO05D005930 6.2e-59 231.1 224 55.4
SHI38855 Sapria himalayana HOM05D004911 ORTHO05D005930 2.2e-56 222.6 216 57.4
SHI39007 Sapria himalayana HOM05D004911 ORTHO05D005930 7.8e-46 187.6 207 50.7
SHI42568 Sapria himalayana HOM05D004911 ORTHO05D005930 7.8e-46 187.6 191 52.9
SHI49274 Sapria himalayana HOM05D004911 ORTHO05D005930 2.8e-43 179.1 187 53.5
SHI45395 Sapria himalayana HOM05D004911 ORTHO05D005930 2.1e-35 152.9 146 55.5
SHI45716 Sapria himalayana HOM05D004911 ORTHO05D005930 2.1e-35 152.9 146 55.5
SHI50333 Sapria himalayana HOM05D004911 ORTHO05D005930 4.4e-33 145.2 129 58.9
SHI47273 Sapria himalayana HOM05D004911 ORTHO05D005930 1.4e-31 140.2 131 57.3
SHI52879 Sapria himalayana HOM05D004911 ORTHO05D005930 2.7e-30 136.0 87 75.9
Manes.03G080800 Manihot esculenta HOM05D004911 ORTHO05D005930 1.2e-25 120.6 241 33.2
Rhsim09G0072200 Rhododendron simsii HOM05D004911 ORTHO05D005930 1.2e-25 120.6 240 32.5
Sabra08G0063200 Salix brachista HOM05D004911 ORTHO05D005930 5.8e-25 118.2 241 33.2
PSO063G3537 Papaver somniferum HOM05D004911 ORTHO05D005930 4.9e-24 115.2 241 32.8
PSO782G1502 Papaver somniferum HOM05D004911 ORTHO05D005930 6.4e-24 114.8 241 32.8
Ciclev10030563m.g Citrus clementina HOM05D004911 ORTHO05D005930 1.9e-23 113.2 240 31.2
DCAR_023433 Daucus carota HOM05D004911 ORTHO05D005930 2.4e-23 112.8 239 31.8
vmacro16011 Vaccinium macrocarpon HOM05D004911 ORTHO05D005930 3.2e-23 112.5 240 31.2
TAR371G0035 Trochodendron aralioides HOM05D004911 ORTHO05D005930 7.1e-23 111.3 240 31.2
MBI03_g33919_MAGBIO Magnolia biondii HOM05D004911 ORTHO05D005930 1.2e-22 110.5 240 30.4
MD07G1172300 Malus domestica HOM05D004911 ORTHO05D005930 1.6e-22 110.2 240 30.0
TWI53G1120 Tripterygium wilfordii HOM05D004911 ORTHO05D005930 2.7e-22 109.4 155 36.1
CiPaw.05G166600 Carya illinoinensis HOM05D004911 ORTHO05D005930 3.5e-22 109.0 239 30.5
Duzib251G0593 Durio zibethinus HOM05D004911 ORTHO05D005930 4.6e-22 108.6 240 29.2
CSS0020868 Camellia sinensis var. sinensis HOM05D004911 ORTHO05D005930 6.0e-22 108.2 154 37.7
Dinv12051 Davidia involucrata HOM05D004911 ORTHO05D005930 6.0e-22 108.2 240 29.6
ECA246G1490 Erigeron canadensis HOM05D004911 ORTHO05D005930 7.9e-22 107.8 240 29.6
Hma1.2p1_0183F.1_g081050 Hydrangea macrophylla HOM05D004911 ORTHO05D005930 1.0e-21 107.5 232 31.0
Cpa.g.sc63.15 Carica papaya HOM05D004911 ORTHO05D005930 2.3e-21 106.3 241 32.0
Nitab4.5_0000677g0060 Nicotiana tabacum HOM05D004911 ORTHO05D005930 3.0e-21 105.9 239 30.5
Hma1.2p1_0183F.1_g081060 Hydrangea macrophylla HOM05D004911 ORTHO05D005930 3.9e-21 105.5 180 32.8
Atru.chr11.1224 Acer truncatum HOM05D004911 ORTHO05D005930 6.7e-21 104.8 152 36.8
EL10Ac9g22915 Beta vulgaris HOM05D004911 ORTHO05D005930 6.7e-21 104.8 237 30.4
FAN03G1024 Fragaria x ananassa HOM05D004911 ORTHO05D005930 1.1e-20 104.0 240 30.8
FAN10G1537 Fragaria x ananassa HOM05D004911 ORTHO05D005930 1.1e-20 104.0 240 30.8
Nitab4.5_0000562g0030 Nicotiana tabacum HOM05D004911 ORTHO05D005930 1.1e-20 104.0 239 30.5
Potri.008G085300 Populus trichocarpa HOM05D004911 ORTHO05D005930 1.1e-20 104.0 153 37.3
Solyc10g079850.2 Solanum lycopersicum HOM05D004911 ORTHO05D005930 1.1e-20 104.0 239 31.0
PGSC0003DMG400029831 Solanum tuberosum HOM05D004911 ORTHO05D005930 1.1e-20 104.0 239 31.0
MSTRG.8077 Avicennia marina HOM05D004911 ORTHO05D005930 1.5e-20 103.6 240 30.0
FAN10G0928 Fragaria x ananassa HOM05D004911 ORTHO05D005930 1.5e-20 103.6 240 30.8
Actinidia04316 Actinidia chinensis HOM05D004911 ORTHO05D005930 1.9e-20 103.2 151 36.4
CAN.G1656.8 Capsicum annuum HOM05D004911 ORTHO05D005930 1.9e-20 103.2 239 31.0
Cfa008718 Carpinus fangiana HOM05D004911 ORTHO05D005930 1.9e-20 103.2 240 30.8
SalBow2G3529 Salvia bowleyana HOM05D004911 ORTHO05D005930 1.9e-20 103.2 154 35.1
BcaC09g48939 Brassica carinata HOM05D004911 ORTHO05D005930 2.5e-20 102.8 126 40.5
Eucgr.J00848 Eucalyptus grandis HOM05D004911 ORTHO05D005930 2.5e-20 102.8 240 29.2
Migut.H02310 Erythranthe guttata HOM05D004911 ORTHO05D005930 3.3e-20 102.4 153 35.3
FvH4_7g19060 Fragaria vesca HOM05D004911 ORTHO05D005930 3.3e-20 102.4 240 30.4
FAN06G1517 Fragaria x ananassa HOM05D004911 ORTHO05D005930 3.3e-20 102.4 240 30.4
FAN06G4750 Fragaria x ananassa HOM05D004911 ORTHO05D005930 3.3e-20 102.4 240 30.4
Nn3g18681 Nelumbo nucifera HOM05D004911 ORTHO05D005930 3.3e-20 102.4 161 35.4
HPP92_012845 Vanilla planifolia HOM05D004911 ORTHO05D005930 3.3e-20 102.4 156 35.3
FAN01G1211 Fragaria x ananassa HOM05D004911 ORTHO05D005930 4.3e-20 102.1 240 30.8
Lj3C852G13 Lonicera japonica HOM05D004911 ORTHO05D005930 4.3e-20 102.1 155 35.5
GSVIVG01010210001 Vitis vinifera HOM05D004911 ORTHO05D005930 4.3e-20 102.1 154 35.7
Lalb_Chr19g0139351 Lupinus albus HOM05D004911 ORTHO05D005930 5.6e-20 101.7 198 34.3
Peaxi162Scf01315g00114 Petunia axillaris HOM05D004911 ORTHO05D005930 5.6e-20 101.7 239 29.7
CARHR095390 Cardamine hirsuta HOM05D004911 ORTHO05D005930 7.4e-20 101.3 244 30.3
Psat7g173880 Pisum sativum HOM05D004911 ORTHO05D005930 7.4e-20 101.3 153 36.6
HanXRQChr06g0175521 Helianthus annuus HOM05D004911 ORTHO05D005930 9.6e-20 100.9 153 35.3
Oeu056145.2 Olea europaea HOM05D004911 ORTHO05D005930 9.6e-20 100.9 236 29.2
Sopen10g030460 Solanum pennellii HOM05D004911 ORTHO05D005930 9.6e-20 100.9 239 30.5
COL.COLO4_16624 Corchorus olitorius HOM05D004911 ORTHO05D005930 1.3e-19 100.5 240 27.1
Lj3g0004396 Lotus japonicus HOM05D004911 ORTHO05D005930 1.6e-19 100.1 240 30.8
A01p34870 Brassica napus HOM05D004911 ORTHO05D005930 2.1e-19 99.8 147 37.4
BraA01t03570Z Brassica rapa HOM05D004911 ORTHO05D005930 2.1e-19 99.8 147 37.4
Lsat_1_v5_gn_0_9321 Lactuca sativa HOM05D004911 ORTHO05D005930 2.1e-19 99.8 230 27.8
SGA_v2.0_scaffold80G25956 Striga asiatica HOM05D004911 ORTHO05D005930 2.8e-19 99.4 153 34.0
Thecc.02G295700 Theobroma cacao HOM05D004911 ORTHO05D005930 2.8e-19 99.4 240 28.3
Ca_25607_v3 Cicer arietinum L. HOM05D004911 ORTHO05D005930 3.6e-19 99.0 156 35.9
SHI47080 Sapria himalayana HOM05D004911 ORTHO05D005930 3.6e-19 99.0 77 64.9
Aqoxy3G04281 Aquilegia oxysepala HOM05D004911 ORTHO05D005930 4.8e-19 98.6 240 29.2
Sp3g17890 Schrenkiella parvula HOM05D004911 ORTHO05D005930 4.8e-19 98.6 146 37.7
Phvul.002G058701 Phaseolus vulgaris HOM05D004911 ORTHO05D005930 6.2e-19 98.2 156 35.9
AT3G19870 Arabidopsis thaliana HOM05D004911 ORTHO05D005930 8.1e-19 97.8 165 34.5
C01p44300 Brassica napus HOM05D004911 ORTHO05D005930 8.1e-19 97.8 147 36.1
BolC1t04393H Brassica oleracea HOM05D004911 ORTHO05D005930 8.1e-19 97.8 147 36.1
Carub.0003s1976 Capsella rubella HOM05D004911 ORTHO05D005930 8.1e-19 97.8 162 35.8
RcHm_v2.0_Chr1g0362961 Rosa chinensis HOM05D004911 ORTHO05D005930 8.1e-19 97.8 240 28.8
Glyma.12G027900 Glycine max HOM05D004911 ORTHO05D005930 1.1e-18 97.4 156 35.3
PGR044G1924 Punica granatum HOM05D004911 ORTHO05D005930 1.1e-18 97.4 246 28.9
ClCG01G007110 Citrullus lanatus HOM05D004911 ORTHO05D005930 1.4e-18 97.1 170 32.9
VMungo1215G1051 Vigna mungo HOM05D004911 ORTHO05D005930 1.4e-18 97.1 156 35.9
CDE05G0535 Ceratophyllum demersum HOM05D004911 ORTHO05D005930 1.8e-18 96.7 236 29.2
Prupe.2G211300 Prunus persica HOM05D004911 ORTHO05D005930 1.8e-18 96.7 153 33.3
Sc06g0007820 Simmondsia chinensis HOM05D004911 ORTHO05D005930 1.8e-18 96.7 232 28.9
Medtr4g074460 Medicago truncatula HOM05D004911 ORTHO05D005930 2.4e-18 96.3 148 36.5
Aa31LG8G6640 Aethionema arabicum HOM05D004911 ORTHO05D005930 3.1e-18 95.9 153 35.9
AL3G33410 Arabidopsis lyrata HOM05D004911 ORTHO05D005930 5.3e-18 95.1 162 34.6
MD01G1105900 Malus domestica HOM05D004911 ORTHO05D005930 5.3e-18 95.1 153 34.0
THA.LOC104809147 Tarenaya hassleriana HOM05D004911 ORTHO05D005930 5.3e-18 95.1 154 35.1
Glyma.11G102800 Glycine max HOM05D004911 ORTHO05D005930 1.5e-17 93.6 156 34.0
Sed0025480 Sechium edule HOM05D004911 ORTHO05D005930 2.0e-17 93.2 153 33.3
CsaV3_5G017560 Cucumis sativus L. HOM05D004911 ORTHO05D005930 2.6e-17 92.8 177 29.9
AUR62017660 Chenopodium quinoa HOM05D004911 ORTHO05D005930 3.4e-17 92.4 237 27.4
arahy.Tifrunner.gnm1.ann1.Q7DFN3 Arachis hypogaea HOM05D004911 ORTHO05D005930 5.8e-17 91.7 152 34.9
MELO3C005202.2 Cucumis melo HOM05D004911 ORTHO05D005930 5.8e-17 91.7 153 32.7
CANSAT56G0121 Cannabis sativa HOM05D004911 ORTHO05D005930 7.6e-17 91.3 153 34.6
Gohir.D04G186500 Gossypium hirsutum HOM05D004911 ORTHO05D005930 1.7e-16 90.1 242 26.4
ATR0564G294 Amborella trichopoda HOM05D004911 ORTHO05D005930 2.2e-16 89.7 156 30.8
unitig_22.g6363 Utricularia gibba HOM05D004911 ORTHO05D005930 3.8e-16 89.0 150 32.0
Thhalv10019942m.g Eutrema salsugineum HOM05D004911 ORTHO05D005930 8.4e-16 87.8 81 50.6
QL03p043438 Quercus lobata HOM05D004911 ORTHO05D005930 1.1e-15 87.4 129 38.8
Gohir.A04G143200 Gossypium hirsutum HOM05D004911 ORTHO05D005930 1.9e-15 86.7 242 25.6
Zm00001eb259390 Zea mays HOM05D004911 ORTHO05D005930 2.1e-14 83.2 232 25.4
Hund08529 Selenicereus undatus HOM05D004911 ORTHO05D005930 3.5e-14 82.4 144 30.6
Gorai.012G182900 Gossypium raimondii HOM05D004911 ORTHO05D005930 4.6e-14 82.0 153 30.1
Os02g0829400 Oryza sativa ssp. japonica HOM05D004911 ORTHO05D005930 4.6e-14 82.0 152 29.6
Haze_11728 Corylus avellana HOM05D004911 ORTHO05D005930 7.9e-14 81.3 130 36.2
Cc07_g19490 Coffea canephora HOM05D004911 ORTHO05D005930 2.3e-13 79.7 153 28.1
Ah.01g001680 Amaranthus hybridus HOM05D004911 ORTHO05D005930 1.9e-12 76.6 139 30.9
AUR62015197 Chenopodium quinoa HOM05D004911 ORTHO05D005930 5.6e-12 75.1 101 37.6
AagrBONN_evm.TU.Sc2ySwM_228.3554 Anthoceros agrestis HOM05D004911 ORTHO05D005930 4.8e-11 72.0 92 37.0
Mapoly0023s0169 Marchantia polymorpha HOM05D004911 ORTHO05D005930 5.3e-10 68.6 81 38.3
Pp3c23_5970 Physcomitrium patens HOM05D004911 ORTHO05D005930 6.9e-10 68.2 153 28.8
SMO367G0101 Selaginella moellendorffii HOM05D004911 ORTHO05D005930 1.4e-07 60.5 90 34.4


User provided reference genes

Program Settings