Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI45051 Sapria himalayana HOM05D004911 ORTHO05D005930 1.7e-70 270.0 133 100.0
SHI04173 Sapria himalayana HOM05D004911 ORTHO05D005930 2.3e-19 100.1 55 89.1
SHI34912 Sapria himalayana HOM05D004911 ORTHO05D005930 5.0e-19 99.0 59 79.7
SHI38855 Sapria himalayana HOM05D004911 ORTHO05D005930 1.5e-18 97.4 57 84.2
SHI39007 Sapria himalayana HOM05D004911 ORTHO05D005930 2.3e-16 90.1 57 77.2
TWI53G1120 Tripterygium wilfordii HOM05D004911 ORTHO05D005930 4.4e-15 85.9 55 72.7
Hund08529 Selenicereus undatus HOM05D004911 ORTHO05D005930 1.3e-14 84.3 58 70.7
PSO063G3537 Papaver somniferum HOM05D004911 ORTHO05D005930 2.2e-14 83.6 55 70.9
PSO782G1502 Papaver somniferum HOM05D004911 ORTHO05D005930 2.2e-14 83.6 55 70.9
Cc07_g19490 Coffea canephora HOM05D004911 ORTHO05D005930 2.9e-14 83.2 59 69.5
Cfa008718 Carpinus fangiana HOM05D004911 ORTHO05D005930 3.7e-14 82.8 54 72.2
QL03p043438 Quercus lobata HOM05D004911 ORTHO05D005930 3.7e-14 82.8 54 72.2
Atru.chr11.1224 Acer truncatum HOM05D004911 ORTHO05D005930 4.9e-14 82.4 52 75.0
CSS0020868 Camellia sinensis var. sinensis HOM05D004911 ORTHO05D005930 4.9e-14 82.4 52 75.0
AUR62017660 Chenopodium quinoa HOM05D004911 ORTHO05D005930 6.4e-14 82.0 57 66.7
Ca_25607_v3 Cicer arietinum L. HOM05D004911 ORTHO05D005930 8.3e-14 81.6 54 72.2
MD07G1172300 Malus domestica HOM05D004911 ORTHO05D005930 8.3e-14 81.6 54 70.4
EL10Ac9g22915 Beta vulgaris HOM05D004911 ORTHO05D005930 1.1e-13 81.3 54 66.7
Lj3C852G13 Lonicera japonica HOM05D004911 ORTHO05D005930 1.1e-13 81.3 52 73.1
Ah.01g001680 Amaranthus hybridus HOM05D004911 ORTHO05D005930 1.4e-13 80.9 57 63.2
Prupe.2G211300 Prunus persica HOM05D004911 ORTHO05D005930 1.4e-13 80.9 54 70.4
AUR62015197 Chenopodium quinoa HOM05D004911 ORTHO05D005930 1.9e-13 80.5 57 64.9
Lalb_Chr19g0139351 Lupinus albus HOM05D004911 ORTHO05D005930 1.9e-13 80.5 54 70.4
THA.LOC104809147 Tarenaya hassleriana HOM05D004911 ORTHO05D005930 1.9e-13 80.5 55 69.1
CANSAT56G0121 Cannabis sativa HOM05D004911 ORTHO05D005930 2.4e-13 80.1 54 68.5
vmacro16011 Vaccinium macrocarpon HOM05D004911 ORTHO05D005930 2.4e-13 80.1 52 69.2
Actinidia04316 Actinidia chinensis HOM05D004911 ORTHO05D005930 3.2e-13 79.7 56 66.1
Ciclev10030563m.g Citrus clementina HOM05D004911 ORTHO05D005930 3.2e-13 79.7 52 71.2
Glyma.11G102800 Glycine max HOM05D004911 ORTHO05D005930 3.2e-13 79.7 54 70.4
Lj3g0004396 Lotus japonicus HOM05D004911 ORTHO05D005930 3.2e-13 79.7 54 70.4
Rhsim09G0072200 Rhododendron simsii HOM05D004911 ORTHO05D005930 3.2e-13 79.7 52 69.2
RcHm_v2.0_Chr1g0362961 Rosa chinensis HOM05D004911 ORTHO05D005930 3.2e-13 79.7 54 70.4
TAR371G0035 Trochodendron aralioides HOM05D004911 ORTHO05D005930 3.2e-13 79.7 55 67.3
DCAR_023433 Daucus carota HOM05D004911 ORTHO05D005930 4.1e-13 79.3 52 69.2
Lsat_1_v5_gn_0_9321 Lactuca sativa HOM05D004911 ORTHO05D005930 4.1e-13 79.3 54 68.5
Os02g0829400 Oryza sativa ssp. japonica HOM05D004911 ORTHO05D005930 5.4e-13 79.0 52 71.2
Glyma.12G027900 Glycine max HOM05D004911 ORTHO05D005930 7.1e-13 78.6 54 68.5
Aqoxy3G04281 Aquilegia oxysepala HOM05D004911 ORTHO05D005930 9.2e-13 78.2 54 66.7
arahy.Tifrunner.gnm1.ann1.Q7DFN3 Arachis hypogaea HOM05D004911 ORTHO05D005930 9.2e-13 78.2 51 72.5
ClCG01G007110 Citrullus lanatus HOM05D004911 ORTHO05D005930 9.2e-13 78.2 54 70.4
MBI03_g33919_MAGBIO Magnolia biondii HOM05D004911 ORTHO05D005930 9.2e-13 78.2 51 68.6
MD01G1105900 Malus domestica HOM05D004911 ORTHO05D005930 9.2e-13 78.2 54 66.7
Nn3g18681 Nelumbo nucifera HOM05D004911 ORTHO05D005930 9.2e-13 78.2 52 69.2
Phvul.002G058701 Phaseolus vulgaris HOM05D004911 ORTHO05D005930 9.2e-13 78.2 54 70.4
Psat7g173880 Pisum sativum HOM05D004911 ORTHO05D005930 9.2e-13 78.2 51 72.5
Sabra08G0063200 Salix brachista HOM05D004911 ORTHO05D005930 9.2e-13 78.2 54 68.5
CiPaw.05G166600 Carya illinoinensis HOM05D004911 ORTHO05D005930 1.2e-12 77.8 54 66.7
MELO3C005202.2 Cucumis melo HOM05D004911 ORTHO05D005930 1.2e-12 77.8 54 68.5
CsaV3_5G017560 Cucumis sativus L. HOM05D004911 ORTHO05D005930 1.2e-12 77.8 54 68.5
Medtr4g074460 Medicago truncatula HOM05D004911 ORTHO05D005930 1.2e-12 77.8 51 72.5
Nitab4.5_0000677g0060 Nicotiana tabacum HOM05D004911 ORTHO05D005930 1.2e-12 77.8 56 64.3
Sc06g0007820 Simmondsia chinensis HOM05D004911 ORTHO05D005930 1.2e-12 77.8 52 69.2
AL3G33410 Arabidopsis lyrata HOM05D004911 ORTHO05D005930 1.6e-12 77.4 53 67.9
AT3G19870 Arabidopsis thaliana HOM05D004911 ORTHO05D005930 1.6e-12 77.4 52 69.2
Peaxi162Scf01315g00114 Petunia axillaris HOM05D004911 ORTHO05D005930 1.6e-12 77.4 55 65.5
HPP92_012845 Vanilla planifolia HOM05D004911 ORTHO05D005930 1.6e-12 77.4 55 65.5
Dinv12051 Davidia involucrata HOM05D004911 ORTHO05D005930 2.1e-12 77.0 52 69.2
Manes.03G080800 Manihot esculenta HOM05D004911 ORTHO05D005930 2.1e-12 77.0 59 62.7
Potri.008G085300 Populus trichocarpa HOM05D004911 ORTHO05D005930 2.1e-12 77.0 58 63.8
Sed0025480 Sechium edule HOM05D004911 ORTHO05D005930 2.1e-12 77.0 52 69.2
GSVIVG01010210001 Vitis vinifera HOM05D004911 ORTHO05D005930 2.1e-12 77.0 51 70.6
CAN.G1656.8 Capsicum annuum HOM05D004911 ORTHO05D005930 2.7e-12 76.6 56 62.5
Nitab4.5_0000562g0030 Nicotiana tabacum HOM05D004911 ORTHO05D005930 2.7e-12 76.6 56 62.5
PGR044G1924 Punica granatum HOM05D004911 ORTHO05D005930 2.7e-12 76.6 56 62.5
Sp3g17890 Schrenkiella parvula HOM05D004911 ORTHO05D005930 2.7e-12 76.6 52 69.2
Zm00001eb259390 Zea mays HOM05D004911 ORTHO05D005930 2.7e-12 76.6 52 69.2
ATR0564G294 Amborella trichopoda HOM05D004911 ORTHO05D005930 3.5e-12 76.3 53 67.9
BcaC09g48939 Brassica carinata HOM05D004911 ORTHO05D005930 3.5e-12 76.3 58 60.3
A01p34870 Brassica napus HOM05D004911 ORTHO05D005930 3.5e-12 76.3 58 60.3
C01p44300 Brassica napus HOM05D004911 ORTHO05D005930 3.5e-12 76.3 58 60.3
BolC1t04393H Brassica oleracea HOM05D004911 ORTHO05D005930 3.5e-12 76.3 58 60.3
BraA01t03570Z Brassica rapa HOM05D004911 ORTHO05D005930 3.5e-12 76.3 58 60.3
Carub.0003s1976 Capsella rubella HOM05D004911 ORTHO05D005930 4.6e-12 75.9 53 67.9
COL.COLO4_16624 Corchorus olitorius HOM05D004911 ORTHO05D005930 4.6e-12 75.9 54 66.7
VMungo1215G1051 Vigna mungo HOM05D004911 ORTHO05D005930 4.6e-12 75.9 54 66.7
Oeu056145.2 Olea europaea HOM05D004911 ORTHO05D005930 6.0e-12 75.5 54 68.5
Solyc10g079850.2 Solanum lycopersicum HOM05D004911 ORTHO05D005930 6.0e-12 75.5 56 62.5
Sopen10g030460 Solanum pennellii HOM05D004911 ORTHO05D005930 6.0e-12 75.5 56 62.5
PGSC0003DMG400029831 Solanum tuberosum HOM05D004911 ORTHO05D005930 6.0e-12 75.5 56 62.5
Thecc.02G295700 Theobroma cacao HOM05D004911 ORTHO05D005930 6.0e-12 75.5 59 59.3
CARHR095390 Cardamine hirsuta HOM05D004911 ORTHO05D005930 7.8e-12 75.1 53 66.0
FAN01G1211 Fragaria x ananassa HOM05D004911 ORTHO05D005930 7.8e-12 75.1 54 66.7
ECA246G1490 Erigeron canadensis HOM05D004911 ORTHO05D005930 1.0e-11 74.7 56 62.5
Migut.H02310 Erythranthe guttata HOM05D004911 ORTHO05D005930 1.0e-11 74.7 54 64.8
Mapoly0023s0169 Marchantia polymorpha HOM05D004911 ORTHO05D005930 1.0e-11 74.7 49 69.4
FvH4_7g19060 Fragaria vesca HOM05D004911 ORTHO05D005930 1.3e-11 74.3 54 66.7
FAN06G1517 Fragaria x ananassa HOM05D004911 ORTHO05D005930 1.3e-11 74.3 54 66.7
FAN06G4750 Fragaria x ananassa HOM05D004911 ORTHO05D005930 1.3e-11 74.3 54 66.7
FAN10G0928 Fragaria x ananassa HOM05D004911 ORTHO05D005930 1.3e-11 74.3 54 66.7
FAN10G1537 Fragaria x ananassa HOM05D004911 ORTHO05D005930 1.3e-11 74.3 54 66.7
Thhalv10019942m.g Eutrema salsugineum HOM05D004911 ORTHO05D005930 1.7e-11 73.9 53 64.2
FAN03G1024 Fragaria x ananassa HOM05D004911 ORTHO05D005930 2.3e-11 73.6 52 67.3
Gohir.A04G143200 Gossypium hirsutum HOM05D004911 ORTHO05D005930 2.3e-11 73.6 59 59.3
HanXRQChr06g0175521 Helianthus annuus HOM05D004911 ORTHO05D005930 2.3e-11 73.6 52 65.4
Cpa.g.sc63.15 Carica papaya HOM05D004911 ORTHO05D005930 3.0e-11 73.2 52 61.5
Gohir.D04G186500 Gossypium hirsutum HOM05D004911 ORTHO05D005930 3.0e-11 73.2 59 59.3
Gorai.012G182900 Gossypium raimondii HOM05D004911 ORTHO05D005930 3.0e-11 73.2 59 59.3
AagrBONN_evm.TU.Sc2ySwM_228.3554 Anthoceros agrestis HOM05D004911 ORTHO05D005930 3.9e-11 72.8 50 68.0
Hma1.2p1_0183F.1_g081050 Hydrangea macrophylla HOM05D004911 ORTHO05D005930 3.9e-11 72.8 52 65.4
Hma1.2p1_0183F.1_g081060 Hydrangea macrophylla HOM05D004911 ORTHO05D005930 3.9e-11 72.8 52 65.4
MSTRG.8077 Avicennia marina HOM05D004911 ORTHO05D005930 5.1e-11 72.4 52 63.5
Aa31LG8G6640 Aethionema arabicum HOM05D004911 ORTHO05D005930 8.6e-11 71.6 52 63.5
unitig_22.g6363 Utricularia gibba HOM05D004911 ORTHO05D005930 8.6e-11 71.6 51 68.6
CBR_g20270 Chara braunii HOM05D004911 ORTHO05D005930 1.9e-10 70.5 54 61.1
Duzib251G0593 Durio zibethinus HOM05D004911 ORTHO05D005930 1.9e-10 70.5 59 55.9
Eucgr.J00848 Eucalyptus grandis HOM05D004911 ORTHO05D005930 1.9e-10 70.5 51 62.7
SalBow2G3529 Salvia bowleyana HOM05D004911 ORTHO05D005930 1.9e-10 70.5 59 54.2
Pp3c23_5970 Physcomitrium patens HOM05D004911 ORTHO05D005930 2.5e-10 70.1 51 62.7
SHI34648 Sapria himalayana HOM05D002853 ORTHO05D003030 9.5e-10 68.2 97 42.3
SMO367G0101 Selaginella moellendorffii HOM05D004911 ORTHO05D005930 1.6e-09 67.4 55 52.7
CDE05G0535 Ceratophyllum demersum HOM05D004911 ORTHO05D005930 4.7e-09 65.9 60 51.7
SHI45395 Sapria himalayana HOM05D004911 ORTHO05D005930 5.2e-08 62.4 42 76.2
SHI45716 Sapria himalayana HOM05D004911 ORTHO05D005930 5.2e-08 62.4 42 76.2
Haze_11728 Corylus avellana HOM05D004911 ORTHO05D005930 2.6e-07 60.1 40 72.5
SHI50333 Sapria himalayana HOM05D004911 ORTHO05D005930 1.7e-06 57.4 38 76.3


User provided reference genes

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