Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI44216 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-47 191.8 89 100.0
SHI35188 Sapria himalayana HOM05D001560 ORTHO05D004675 2.5e-22 108.6 83 62.7
BcaC09g49591 Brassica carinata HOM05D001560 ORTHO05D004675 6.1e-21 104.0 86 61.6
SHI36939 Sapria himalayana HOM05D001560 ORTHO05D004675 2.3e-20 102.1 69 72.5
SHI26652 Sapria himalayana HOM05D001560 ORTHO05D004675 5.2e-20 100.9 70 70.0
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 8.8e-20 100.1 69 72.5
SHI47572 Sapria himalayana HOM05D001560 ORTHO05D004675 8.8e-20 100.1 69 72.5
SHI33931 Sapria himalayana HOM05D001560 ORTHO05D004675 3.4e-19 98.2 69 71.0
SHI48979 Sapria himalayana HOM05D001560 ORTHO05D004675 3.4e-19 98.2 69 69.6
SHI49196 Sapria himalayana HOM05D001560 ORTHO05D004675 3.4e-19 98.2 69 71.0
SHI54579 Sapria himalayana HOM05D001560 ORTHO05D004675 3.4e-19 98.2 69 71.0
SHI36971 Sapria himalayana HOM05D001560 ORTHO05D004675 4.4e-19 97.8 69 71.0
SHI43258 Sapria himalayana HOM05D001560 ORTHO05D004675 4.4e-19 97.8 69 71.0
SHI39097 Sapria himalayana HOM05D001560 ORTHO05D004675 5.7e-19 97.4 46 95.7
SHI51556 Sapria himalayana HOM05D001560 ORTHO05D004675 5.7e-19 97.4 45 97.8
SHI38033 Sapria himalayana HOM05D001560 ORTHO05D004675 7.5e-19 97.1 69 69.6
SHI39123 Sapria himalayana HOM05D001560 ORTHO05D004675 7.5e-19 97.1 69 68.1
SHI45393 Sapria himalayana HOM05D001560 ORTHO05D004675 7.5e-19 97.1 69 69.6
SHI37085 Sapria himalayana HOM05D001560 ORTHO05D004675 9.8e-19 96.7 68 70.6
Aa31csc239G40 Aethionema arabicum HOM05D001560 ORTHO05D004675 1.3e-18 96.3 69 69.6
BcaC09g49590 Brassica carinata HOM05D001560 ORTHO05D004675 1.3e-18 96.3 69 69.6
BolSC28t60362H Brassica oleracea HOM05D001560 ORTHO05D004675 1.3e-18 96.3 69 69.6
BraSC48t46349Z Brassica rapa HOM05D001560 ORTHO05D004675 1.3e-18 96.3 69 69.6
CARHR287160 Cardamine hirsuta HOM05D001560 ORTHO05D004675 1.3e-18 96.3 69 69.6
ECA039G0015 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.3e-18 96.3 69 69.6
ECA039G0026 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.3e-18 96.3 69 69.6
ECA041G0003 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.3e-18 96.3 69 69.6
ECA238G3729 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.3e-18 96.3 69 69.6
Migut.D01524 Erythranthe guttata HOM05D001560 ORTHO05D004675 1.3e-18 96.3 69 69.6
Thhalv10022839m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 1.3e-18 96.3 69 69.6
HanXRQChr02g0035261 Helianthus annuus HOM05D001560 ORTHO05D004675 1.3e-18 96.3 69 69.6
SHI35320 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-18 96.3 46 93.5
Sp3g25870 Schrenkiella parvula HOM05D001560 ORTHO05D004675 1.3e-18 96.3 69 69.6
BolSC28t60305H Brassica oleracea HOM05D001560 ORTHO05D004675 1.7e-18 95.9 68 70.6
Dinv06677 Davidia involucrata HOM05D001560 ORTHO05D004675 2.2e-18 95.5 76 64.5
SHI35231 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-18 95.5 46 91.3
SHI40902 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-18 95.5 69 68.1
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 2.2e-18 95.5 69 69.6
SHI51143 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-18 95.5 69 69.6
ATMG00070 Arabidopsis thaliana HOM05D001560 ORTHO05D004675 2.8e-18 95.1 69 68.1
CARHR282620 Cardamine hirsuta HOM05D001560 ORTHO05D004675 2.8e-18 95.1 69 68.1
SHI36139 Sapria himalayana HOM05D001560 ORTHO05D004675 2.8e-18 95.1 68 70.6
SHI36380 Sapria himalayana HOM05D001560 ORTHO05D004675 2.8e-18 95.1 69 69.6
SHI36583 Sapria himalayana HOM05D001560 ORTHO05D004675 3.7e-18 94.7 69 68.1
SHI37161 Sapria himalayana HOM05D000743 ORTHO05D000580 3.7e-18 94.7 69 68.1
SabraMtG0007900 Salix brachista HOM05D001560 ORTHO05D004675 6.3e-18 94.0 69 68.1
SHI36375 Sapria himalayana HOM05D001560 ORTHO05D004675 6.3e-18 94.0 69 68.1
arahy.Tifrunner.gnm1.ann1.E4X7TI Arachis hypogaea HOM05D001560 ORTHO05D004675 8.3e-18 93.6 69 66.7
Thhalv10002997m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 8.3e-18 93.6 69 68.1
Potri.013G066660 Populus trichocarpa HOM05D001560 ORTHO05D004675 8.3e-18 93.6 69 68.1
SHI36081 Sapria himalayana HOM05D001560 ORTHO05D004675 8.3e-18 93.6 45 93.3
SHI52730 Sapria himalayana HOM05D001560 ORTHO05D004675 8.3e-18 93.6 45 93.3
Actinidia34872 Actinidia chinensis HOM05D001560 ORTHO05D004675 1.1e-17 93.2 69 68.1
Ah.02g118870 Amaranthus hybridus HOM05D001560 ORTHO05D004675 1.1e-17 93.2 73 64.4
Ah.08g210720 Amaranthus hybridus HOM05D001560 ORTHO05D004675 1.1e-17 93.2 73 64.4
Ah.10g027950 Amaranthus hybridus HOM05D001560 ORTHO05D004675 1.1e-17 93.2 73 64.4
arahy.Tifrunner.gnm1.ann1.11DKXG Arachis hypogaea HOM05D001560 ORTHO05D004675 1.1e-17 93.2 69 68.1
arahy.Tifrunner.gnm1.ann1.HAH5KR Arachis hypogaea HOM05D001560 ORTHO05D004675 1.1e-17 93.2 69 68.1
CANSAT16G0009 Cannabis sativa HOM05D001560 ORTHO05D004675 1.1e-17 93.2 69 68.1
CAN.G223.15 Capsicum annuum HOM05D001560 ORTHO05D004675 1.1e-17 93.2 69 68.1
AUR62042344 Chenopodium quinoa HOM05D001560 ORTHO05D004675 1.1e-17 93.2 73 64.4
Ca_22175_v3 Cicer arietinum L. HOM05D001560 ORTHO05D004675 1.1e-17 93.2 69 68.1
CsaV3_UNG210330 Cucumis sativus L. HOM05D001560 ORTHO05D004675 1.1e-17 93.2 69 68.1
DCAR_031657 Daucus carota HOM05D001560 ORTHO05D004675 1.1e-17 93.2 69 68.1
DCAR_032222 Daucus carota HOM05D001560 ORTHO05D004675 1.1e-17 93.2 69 68.1
DCAR_032439 Daucus carota HOM05D001560 ORTHO05D004675 1.1e-17 93.2 69 68.1
Dinv29327 Davidia involucrata HOM05D001560 ORTHO05D004675 1.1e-17 93.2 69 68.1
Gohir.A01G022400 Gossypium hirsutum HOM05D001560 ORTHO05D004675 1.1e-17 93.2 69 68.1
HanXRQChr00c0055g0571471 Helianthus annuus HOM05D001560 ORTHO05D004675 1.1e-17 93.2 69 68.1
HanXRQChr12g0358671 Helianthus annuus HOM05D001560 ORTHO05D004675 1.1e-17 93.2 69 68.1
HanXRQMTg0579651 Helianthus annuus HOM05D001560 ORTHO05D004675 1.1e-17 93.2 69 68.1
Lj2P1224T99 Lonicera japonica HOM05D001560 ORTHO05D004675 1.1e-17 93.2 69 68.1
Lj2P1227T100 Lonicera japonica HOM05D001560 ORTHO05D004675 1.1e-17 93.2 69 68.1
LjContig00439g0006307 Lotus japonicus HOM05D001560 ORTHO05D004675 1.1e-17 93.2 69 68.1
LjContig00446g0014136 Lotus japonicus HOM05D001560 ORTHO05D004675 1.1e-17 93.2 69 68.1
Lalb_Chr00c21g0406161 Lupinus albus HOM05D001560 ORTHO05D004675 1.1e-17 93.2 69 68.1
Lalb_Chr00c39g0409121 Lupinus albus HOM05D001560 ORTHO05D004675 1.1e-17 93.2 69 68.1
Lalb_Chr00c39g0409261 Lupinus albus HOM05D001560 ORTHO05D004675 1.1e-17 93.2 69 68.1
Lalb_Chr00c51g0413181 Lupinus albus HOM05D001560 ORTHO05D004675 1.1e-17 93.2 69 68.1
Medtr0212s0080 Medicago truncatula HOM05D001560 ORTHO05D004675 1.1e-17 93.2 69 68.1
Peaxi162Scf01588g00002 Petunia axillaris HOM05D001560 ORTHO05D004675 1.1e-17 93.2 69 68.1
Psat7g198960 Pisum sativum HOM05D001560 ORTHO05D004675 1.1e-17 93.2 69 68.1
RcHm_v2.0_Chr6g0257991 Rosa chinensis HOM05D001560 ORTHO05D004675 1.1e-17 93.2 69 68.1
RcHm_v2.0_MTg0498881 Rosa chinensis HOM05D001560 ORTHO05D004675 1.1e-17 93.2 69 68.1
SalBow1G1852 Salvia bowleyana HOM05D001560 ORTHO05D004675 1.1e-17 93.2 69 68.1
Solyc00g019950.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 1.1e-17 93.2 69 68.1
Sopen00g002540 Solanum pennellii HOM05D001560 ORTHO05D004675 1.1e-17 93.2 69 68.1
TPR.G40193 Trifolium pratense HOM05D001560 ORTHO05D004675 1.1e-17 93.2 69 68.1
unitig_87.g28016 Utricularia gibba HOM05D001560 ORTHO05D004675 1.1e-17 93.2 69 68.1
C01p34750 Brassica napus HOM05D001560 ORTHO05D004675 1.8e-17 92.4 69 68.1
BolC1t03442H Brassica oleracea HOM05D001560 ORTHO05D004675 1.8e-17 92.4 69 68.1
Sed0020323 Sechium edule HOM05D001560 ORTHO05D004675 2.4e-17 92.0 69 66.7
SGA_v2.0_scaffold245G44645 Striga asiatica HOM05D001560 ORTHO05D004675 2.4e-17 92.0 69 66.7
Gorai.001G166700 Gossypium raimondii HOM05D007877 ORTHO05D009957 3.1e-17 91.7 45 93.3
SHI38213 Sapria himalayana HOM05D001560 ORTHO05D004675 3.1e-17 91.7 45 93.3
SHI43451 Sapria himalayana HOM05D001560 ORTHO05D004675 3.1e-17 91.7 69 65.2
CAN.G134.23 Capsicum annuum HOM05D001560 ORTHO05D004675 4.1e-17 91.3 69 66.7
Gohir.A03G134200 Gossypium hirsutum HOM05D001560 ORTHO05D004675 4.1e-17 91.3 69 66.7
SHI53856 Sapria himalayana HOM05D001560 ORTHO05D004675 4.1e-17 91.3 69 68.1
RhsimMtG0004600 Rhododendron simsii HOM05D001560 ORTHO05D004675 5.4e-17 90.9 69 66.7
RhsimMtG0006100 Rhododendron simsii HOM05D001560 ORTHO05D004675 5.4e-17 90.9 69 66.7
SHI46062 Sapria himalayana HOM05D001560 ORTHO05D004675 5.4e-17 90.9 64 70.3
SHI27346 Sapria himalayana HOM05D001560 ORTHO05D004675 7.0e-17 90.5 73 63.0
CDE02G0735 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 9.1e-17 90.1 69 66.7
CDE02G2746 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 9.1e-17 90.1 69 66.7
SHI36016 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-16 89.7 69 66.7
Manes.01G049495 Manihot esculenta HOM05D001560 ORTHO05D004675 1.6e-16 89.4 45 91.1
SHI34635 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-16 89.4 69 63.8
Cpa.g.sc38.8 Carica papaya HOM05D001560 ORTHO05D004675 2.0e-16 89.0 69 65.2
SHI37162 Sapria himalayana HOM05D001560 ORTHO05D004675 2.7e-16 88.6 69 65.2
Zm00001eb382940 Zea mays HOM05D001560 ORTHO05D004675 2.7e-16 88.6 69 65.2
Zm00001eb436070 Zea mays HOM05D001560 ORTHO05D004675 2.7e-16 88.6 69 65.2
Zm00001eb440310 Zea mays HOM05D001560 ORTHO05D004675 2.7e-16 88.6 69 65.2
Zm00001eb440380 Zea mays HOM05D001560 ORTHO05D004675 2.7e-16 88.6 69 65.2
Zm00001eb442180 Zea mays HOM05D001560 ORTHO05D004675 2.7e-16 88.6 69 65.2
MBI05_g23323_MAGBIO Magnolia biondii HOM05D001560 ORTHO05D004675 3.5e-16 88.2 69 65.2
Nn1g10115 Nelumbo nucifera HOM05D001560 ORTHO05D004675 3.5e-16 88.2 69 65.2
Ah.10g028660 Amaranthus hybridus HOM05D001560 ORTHO05D004675 4.5e-16 87.8 45 88.9
SHI36775 Sapria himalayana HOM05D001560 ORTHO05D004675 5.9e-16 87.4 45 88.9
SHI36786 Sapria himalayana HOM05D001560 ORTHO05D004675 5.9e-16 87.4 45 88.9
Nitab4.5_0013170g0020 Nicotiana tabacum HOM05D001560 ORTHO05D004675 7.7e-16 87.0 45 88.9
SHI36627 Sapria himalayana HOM05D001560 ORTHO05D004675 1.0e-15 86.7 65 66.2
SHI34631 Sapria himalayana HOM05D001560 ORTHO05D004675 2.3e-15 85.5 45 88.9
CsaV3_5G015950 Cucumis sativus L. HOM05D001560 ORTHO05D004675 3.8e-15 84.7 69 63.8
Hma1.2p1_1099F.1_g256790 Hydrangea macrophylla HOM05D001560 ORTHO05D004675 5.0e-15 84.3 45 86.7
Nitab4.5_0001152g0390 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.9e-14 82.4 45 82.2
SHI42241 Sapria himalayana HOM05D001560 ORTHO05D004675 1.9e-14 82.4 45 86.7
PGSC0003DMG400018984 Solanum tuberosum HOM05D001560 ORTHO05D004675 2.5e-14 82.0 51 76.5
SHI40934 Sapria himalayana HOM05D001560 ORTHO05D004675 3.3e-14 81.6 45 84.4
Lsat_1_v5_gn_1_23980 Lactuca sativa HOM05D001560 ORTHO05D004675 9.5e-14 80.1 45 84.4
Nitab4.5_0001127g0220 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.2e-13 79.7 70 61.4
SHI50434 Sapria himalayana HOM05D001560 ORTHO05D004675 6.1e-13 77.4 37 91.9
Haze_26224 Corylus avellana HOM05D001560 ORTHO05D004675 8.0e-13 77.0 42 78.6
SHI38099 Sapria himalayana HOM05D001560 ORTHO05D004675 1.0e-12 76.6 69 59.4
SHI35332 Sapria himalayana HOM05D001560 ORTHO05D004675 3.0e-12 75.1 34 97.1
SHI53284 Sapria himalayana HOM05D001560 ORTHO05D004675 5.2e-12 74.3 69 59.4
Cre07.g327400 Chlamydomonas reinhardtii HOM05D001560 ORTHO05D004675 1.5e-11 72.8 41 75.6
Os12g0422971 Oryza sativa ssp. japonica HOM05D001560 ORTHO05D004675 1.5e-11 72.8 39 84.6
Nitab4.5_0001152g0580 Nicotiana tabacum HOM05D001560 ORTHO05D004675 2.6e-11 72.0 45 75.6
SHI33107 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-10 69.7 46 73.9
Nitab4.5_0001152g0360 Nicotiana tabacum HOM05D001560 ORTHO05D004675 3.7e-10 68.2 31 96.8
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 3.7e-10 68.2 66 53.0
SHI36269 Sapria himalayana HOM05D001560 ORTHO05D004675 2.0e-08 62.4 29 93.1
HanXRQChr10g0297171 Helianthus annuus HOM05D001560 ORTHO05D004675 5.9e-08 60.8 51 60.8
Nitab4.5_0000661g0100 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.3e-07 59.7 53 58.5
SHI42054 Sapria himalayana HOM05D001560 ORTHO05D004675 9.5e-06 53.5 27 88.9


User provided reference genes

Program Settings