Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI43903 Sapria himalayana HOM05D000849 ORTHO05D003989 1.0e-14 82.0 37 100.0
SHI44503 Sapria himalayana HOM05D000849 ORTHO05D003989 1.0e-14 82.0 37 100.0
SHI47576 Sapria himalayana HOM05D000849 ORTHO05D003989 1.0e-14 82.0 37 100.0
SHI48149 Sapria himalayana HOM05D000849 ORTHO05D003989 1.0e-14 82.0 37 100.0
SHI35880 Sapria himalayana HOM05D000849 ORTHO05D003989 2.0e-13 77.8 37 91.9
SHI51537 Sapria himalayana HOM05D000849 ORTHO05D003989 1.3e-09 65.1 31 93.5
COL.COLO4_18271 Corchorus olitorius HOM05D000849 ORTHO05D003989 3.8e-09 63.5 34 73.5
Duzib150G0327 Durio zibethinus HOM05D000849 ORTHO05D003989 3.8e-09 63.5 34 73.5
Thecc.09G096900 Theobroma cacao HOM05D000849 ORTHO05D003989 3.8e-09 63.5 34 73.5
EL10Ac8g18347 Beta vulgaris HOM05D000849 ORTHO05D003989 5.0e-09 63.2 34 73.5
CANSAT56G1795 Cannabis sativa HOM05D000849 ORTHO05D003989 5.0e-09 63.2 34 73.5
Duzib187G0631 Durio zibethinus HOM05D000849 ORTHO05D003989 5.0e-09 63.2 32 78.1
Migut.J01079 Erythranthe guttata HOM05D000849 ORTHO05D003989 5.0e-09 63.2 34 73.5
Migut.K00562 Erythranthe guttata HOM05D000849 ORTHO05D003989 5.0e-09 63.2 34 73.5
FAN08G2450 Fragaria x ananassa HOM05D000849 ORTHO05D003989 5.0e-09 63.2 31 80.6
Gohir.A13G194600 Gossypium hirsutum HOM05D000849 ORTHO05D003989 5.0e-09 63.2 32 78.1
Gohir.D13G200300 Gossypium hirsutum HOM05D000849 ORTHO05D003989 5.0e-09 63.2 32 78.1
Gorai.013G229100 Gossypium raimondii HOM05D000849 ORTHO05D003989 5.0e-09 63.2 32 78.1
Manes.03G029400 Manihot esculenta HOM05D000849 ORTHO05D003989 5.0e-09 63.2 34 73.5
Nitab4.5_0004180g0010 Nicotiana tabacum HOM05D000849 ORTHO05D003989 5.0e-09 63.2 34 73.5
Phvul.004G173800 Phaseolus vulgaris HOM05D000849 ORTHO05D003989 5.0e-09 63.2 34 73.5
Rhsim03G0235600 Rhododendron simsii HOM05D000849 ORTHO05D003989 5.0e-09 63.2 34 73.5
SHI34978 Sapria himalayana HOM05D000849 ORTHO05D003989 5.0e-09 63.2 57 57.9
Sed0020746 Sechium edule HOM05D000849 ORTHO05D003989 5.0e-09 63.2 34 73.5
vmacro06264 Vaccinium macrocarpon HOM05D000849 ORTHO05D003989 5.0e-09 63.2 34 73.5
Atru.chr7.1508 Acer truncatum HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
Actinidia17501 Actinidia chinensis HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
Ah.09g230330 Amaranthus hybridus HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
ATR0705G079 Amborella trichopoda HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
arahy.Tifrunner.gnm1.ann1.URAI8Z Arachis hypogaea HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
arahy.Tifrunner.gnm1.ann1.XR2T8G Arachis hypogaea HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
MSTRG.19541 Avicennia marina HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
CSS0012070 Camellia sinensis var. sinensis HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
CAN.G1058.10 Capsicum annuum HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
Cpa.g.sc78.44 Carica papaya HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
CiPaw.03G221100 Carya illinoinensis HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
CiPaw.04G154300 Carya illinoinensis HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
CDE05G2264 Ceratophyllum demersum HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
CDE05G3423 Ceratophyllum demersum HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
AUR62021360 Chenopodium quinoa HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
AUR62033272 Chenopodium quinoa HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
ClCG03G015970 Citrullus lanatus HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
Ciclev10009831m.g Citrus clementina HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
Cc06_g10770 Coffea canephora HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
Haze_25852 Corylus avellana HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
MELO3C015429.2 Cucumis melo HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
CsaV3_1G039990 Cucumis sativus L. HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
DCAR_028635 Daucus carota HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
Dinv42272 Davidia involucrata HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
ECA236G3815 Erigeron canadensis HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
Eucgr.C00951 Eucalyptus grandis HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
FvH4_1g06580 Fragaria vesca HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
FAN19G1758 Fragaria x ananassa HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
FAN26G0314 Fragaria x ananassa HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
FAN26G0318 Fragaria x ananassa HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
FAN28G0398 Fragaria x ananassa HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
Glyma.01G005300 Glycine max HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
Glyma.07G126300 Glycine max HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
Gohir.A05G027200 Gossypium hirsutum HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
Gohir.D05G029100 Gossypium hirsutum HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
HanXRQChr09g0238561 Helianthus annuus HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
Hma1.2p1_0663F.1_g198540 Hydrangea macrophylla HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
Lsat_1_v5_gn_8_88280 Lactuca sativa HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
Lj2g0010400 Lotus japonicus HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
Lalb_Chr14g0375221 Lupinus albus HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
MBI04_g06989_MAGBIO Magnolia biondii HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
MD02G1069000 Malus domestica HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
MD15G1200600 Malus domestica HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
Nn8g39010 Nelumbo nucifera HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
Peaxi162Scf00298g00114 Petunia axillaris HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
Potri.006G149100 Populus trichocarpa HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
Prupe.7G216600 Prunus persica HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
PGR142G0605 Punica granatum HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
QL02p086970 Quercus lobata HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
RcHm_v2.0_Chr2g0092321 Rosa chinensis HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
Sabra06G0117900 Salix brachista HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
SalBow6G5864 Salvia bowleyana HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
SHI16713 Sapria himalayana HOM05D000849 ORTHO05D003989 6.5e-09 62.8 34 76.5
SHI37256 Sapria himalayana HOM05D010923 ORTHO05D001219 6.5e-09 62.8 29 96.6
SHI51484 Sapria himalayana HOM05D000849 ORTHO05D003989 6.5e-09 62.8 29 96.6
SHI52555 Sapria himalayana HOM05D000849 ORTHO05D003989 6.5e-09 62.8 29 96.6
SHI52725 Sapria himalayana HOM05D000849 ORTHO05D003989 6.5e-09 62.8 29 96.6
SHI53623 Sapria himalayana HOM05D000849 ORTHO05D003989 6.5e-09 62.8 29 96.6
Hund26299 Selenicereus undatus HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
SEGI_24636 Sequoiadendron giganteum HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
Sc08g0008140 Simmondsia chinensis HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
Solyc05g026130.3 Solanum lycopersicum HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
Sopen05g022340 Solanum pennellii HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
PGSC0003DMG400028942 Solanum tuberosum HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
SGA_v2.0_scaffold279G46782 Striga asiatica HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
SGA_v2.0_scaffold302G47808 Striga asiatica HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
THA.LOC104820037 Tarenaya hassleriana HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
TWI63G0367 Tripterygium wilfordii HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
TAR636G1139 Trochodendron aralioides HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
unitig_26.g9704 Utricularia gibba HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
HPP92_024117 Vanilla planifolia HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
VMungo0464G2126 Vigna mungo HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
GSVIVG01015270001 Vitis vinifera HOM05D000849 ORTHO05D003989 6.5e-09 62.8 31 80.6
Oeu036246.1 Olea europaea HOM05D000849 ORTHO05D003989 8.5e-09 62.4 31 77.4
THA.LOC104814582 Tarenaya hassleriana HOM05D000849 ORTHO05D003989 8.5e-09 62.4 31 77.4
FvH4_5g22770 Fragaria vesca HOM05D000849 ORTHO05D003989 1.1e-08 62.0 31 77.4
FAN18G0868 Fragaria x ananassa HOM05D000849 ORTHO05D003989 1.1e-08 62.0 31 77.4
Manes.16G106500 Manihot esculenta HOM05D000849 ORTHO05D003989 1.1e-08 62.0 34 70.6
SHI46441 Sapria himalayana HOM05D010923 ORTHO05D003989 1.1e-08 62.0 37 73.0
Aa31LG8G16770 Aethionema arabicum HOM05D000849 ORTHO05D003989 1.4e-08 61.6 31 77.4
AL3G48440 Arabidopsis lyrata HOM05D000849 ORTHO05D003989 1.4e-08 61.6 31 77.4
AT2G19790 Arabidopsis thaliana HOM05D000849 ORTHO05D003989 1.4e-08 61.6 31 77.4
BcaB03g16769 Brassica carinata HOM05D000849 ORTHO05D003989 1.4e-08 61.6 31 77.4
BcaC04g22820 Brassica carinata HOM05D000849 ORTHO05D003989 1.4e-08 61.6 31 77.4
BcaC06g36622 Brassica carinata HOM05D000849 ORTHO05D003989 1.4e-08 61.6 31 77.4
A07p00920 Brassica napus HOM05D000849 ORTHO05D003989 1.4e-08 61.6 31 77.4
A09p12580 Brassica napus HOM05D000849 ORTHO05D003989 1.4e-08 61.6 31 77.4
C07p02080 Brassica napus HOM05D000849 ORTHO05D003989 1.4e-08 61.6 31 77.4
C09p14940 Brassica napus HOM05D000849 ORTHO05D003989 1.4e-08 61.6 31 77.4
BolC7t40613H Brassica oleracea HOM05D000849 ORTHO05D003989 1.4e-08 61.6 31 77.4
BolC9t54396H Brassica oleracea HOM05D000849 ORTHO05D003989 1.4e-08 61.6 31 77.4
BraA07t27892Z Brassica rapa HOM05D000849 ORTHO05D003989 1.4e-08 61.6 31 77.4
BraA09t36905Z Brassica rapa HOM05D000849 ORTHO05D003989 1.4e-08 61.6 31 77.4
Carub.0003s3407 Capsella rubella HOM05D000849 ORTHO05D003989 1.4e-08 61.6 31 77.4
CARHR110250 Cardamine hirsuta HOM05D000849 ORTHO05D003989 1.4e-08 61.6 31 77.4
Thhalv10002117m.g Eutrema salsugineum HOM05D000849 ORTHO05D003989 1.4e-08 61.6 31 77.4
Sp3g33140 Schrenkiella parvula HOM05D000849 ORTHO05D003989 1.4e-08 61.6 31 77.4
Aqoxy7G03958 Aquilegia oxysepala HOM05D000849 ORTHO05D003989 1.9e-08 61.2 31 77.4
Ca_17379_v3 Cicer arietinum L. HOM05D000849 ORTHO05D003989 1.9e-08 61.2 31 77.4
Lj4g0006741 Lotus japonicus HOM05D000849 ORTHO05D003989 1.9e-08 61.2 31 77.4
Medtr7g100010 Medicago truncatula HOM05D000849 ORTHO05D003989 1.9e-08 61.2 31 77.4
Medtr8g102180 Medicago truncatula HOM05D000849 ORTHO05D003989 1.9e-08 61.2 31 77.4
Os08g0395300 Oryza sativa ssp. japonica HOM05D000849 ORTHO05D003989 1.9e-08 61.2 31 77.4
Os10g0368400 Oryza sativa ssp. japonica HOM05D000849 ORTHO05D003989 1.9e-08 61.2 31 77.4
PSO210G0713 Papaver somniferum HOM05D000849 ORTHO05D003989 1.9e-08 61.2 31 77.4
PSO210G7720 Papaver somniferum HOM05D000849 ORTHO05D003989 1.9e-08 61.2 31 77.4
PSO832G0835 Papaver somniferum HOM05D000849 ORTHO05D003989 1.9e-08 61.2 31 77.4
Phvul.002G306700 Phaseolus vulgaris HOM05D000849 ORTHO05D003989 1.9e-08 61.2 31 77.4
Psat7g018560 Pisum sativum HOM05D000849 ORTHO05D003989 1.9e-08 61.2 31 77.4
TPR.G34776 Trifolium pratense HOM05D000849 ORTHO05D003989 1.9e-08 61.2 31 77.4
VMungo0251G1053 Vigna mungo HOM05D000849 ORTHO05D003989 1.9e-08 61.2 31 77.4
Zm00001eb178620 Zea mays HOM05D000849 ORTHO05D003989 1.9e-08 61.2 31 77.4
Pp3c14_14670 Physcomitrium patens HOM05D000849 ORTHO05D003989 2.5e-08 60.8 34 70.6
HPP92_009846 Vanilla planifolia HOM05D000849 ORTHO05D003989 2.5e-08 60.8 31 74.2
Gorai.009G029200 Gossypium raimondii HOM05D000849 ORTHO05D003989 3.2e-08 60.5 31 77.4
SHI47843 Sapria himalayana HOM05D000849 ORTHO05D003989 3.2e-08 60.5 29 93.1
Mapoly0016s0005 Marchantia polymorpha HOM05D000849 ORTHO05D003989 4.2e-08 60.1 36 63.9
MSTRG.6030 Avicennia marina HOM05D000849 ORTHO05D003989 5.5e-08 59.7 31 77.4
CBR_g2797 Chara braunii HOM05D000849 ORTHO05D003989 5.5e-08 59.7 31 77.4
SMO196G0114 Selaginella moellendorffii HOM05D000849 ORTHO05D003989 7.2e-08 59.3 31 74.2
PSO063G4962 Papaver somniferum HOM05D000849 ORTHO05D003989 9.4e-08 58.9 31 74.2
PSO782G5042 Papaver somniferum HOM05D000849 ORTHO05D003989 9.4e-08 58.9 31 74.2
SHI42924 Sapria himalayana HOM05D010923 ORTHO05D003989 9.4e-08 58.9 31 80.6
MCO15G266 Micromonas commoda HOM05D000849 ORTHO05D003989 1.6e-07 58.2 31 71.0
SHI23604 Sapria himalayana HOM05D000849 ORTHO05D003989 2.7e-07 57.4 28 85.7
Aqoxy7G01359 Aquilegia oxysepala HOM05D000849 ORTHO05D003989 4.7e-07 56.6 31 71.0
Glyma.05G224800 Glycine max HOM05D000849 ORTHO05D003989 7.9e-07 55.8 31 74.2
PGR102G1239 Punica granatum HOM05D000849 ORTHO05D003989 7.9e-07 55.8 31 71.0
SHI20141 Sapria himalayana HOM05D000849 ORTHO05D003989 6.7e-06 52.8 53 49.1


User provided reference genes

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