Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI43343 Sapria himalayana HOM05D007130 ORTHO05D002078 7.8e-178 627.1 336 100.0
SHI00452 Sapria himalayana HOM05D007130 ORTHO05D002078 1.0e-129 467.2 326 80.1
SHI01765 Sapria himalayana HOM05D007130 ORTHO05D002078 1.5e-99 367.1 346 65.0
SHI22413 Sapria himalayana HOM05D007130 ORTHO05D002078 2.9e-79 299.7 280 65.4
SHI15242 Sapria himalayana HOM05D007130 ORTHO05D002078 2.1e-77 293.5 216 77.3
SHI36601 Sapria himalayana HOM05D007130 ORTHO05D002078 8.1e-74 281.6 235 70.6
SHI37073 Sapria himalayana HOM05D007130 ORTHO05D002078 3.1e-73 279.6 296 58.4
SHI15429 Sapria himalayana HOM05D007130 ORTHO05D002078 1.1e-54 218.0 213 61.5
Manes.03G177600 Manihot esculenta HOM05D007130 ORTHO05D002078 1.9e-51 207.2 387 38.8
Sabra08G0117300 Salix brachista HOM05D007130 ORTHO05D002078 5.5e-46 189.1 358 37.7
Sabra10G0056800 Salix brachista HOM05D007130 ORTHO05D002078 5.5e-46 189.1 356 37.9
Potri.010G086700 Populus trichocarpa HOM05D007130 ORTHO05D002078 1.2e-45 188.0 362 37.0
Potri.008G153800 Populus trichocarpa HOM05D007130 ORTHO05D002078 1.6e-45 187.6 365 37.3
Manes.15G029700 Manihot esculenta HOM05D007130 ORTHO05D002078 1.9e-43 180.6 379 36.7
SHI32253 Sapria himalayana HOM05D007130 ORTHO05D002078 2.5e-43 180.3 205 57.1
Thecc.04G233400 Theobroma cacao HOM05D007130 ORTHO05D002078 1.3e-42 177.9 339 37.8
SHI15023 Sapria himalayana HOM05D007130 ORTHO05D002078 1.5e-40 171.0 195 53.3
SHI31594 Sapria himalayana HOM05D007130 ORTHO05D002078 4.5e-40 169.5 109 82.6
SHI47506 Sapria himalayana HOM05D007130 ORTHO05D002078 1.7e-39 167.5 212 53.3
Duzib052G0494 Durio zibethinus HOM05D007130 ORTHO05D002078 4.2e-38 162.9 338 37.0
Duzib151G0843 Durio zibethinus HOM05D007130 ORTHO05D002078 7.1e-38 162.2 344 35.8
Gorai.005G043500 Gossypium raimondii HOM05D007130 ORTHO05D002078 2.1e-37 160.6 358 34.4
Gohir.D02G039300 Gossypium hirsutum HOM05D007130 ORTHO05D002078 3.5e-37 159.8 366 33.9
COL.COLO4_21489 Corchorus olitorius HOM05D007130 ORTHO05D002078 2.3e-36 157.1 331 36.0
AL7G41010 Arabidopsis lyrata HOM05D007130 ORTHO05D002078 3.0e-36 156.8 394 31.2
Gohir.D09G218800 Gossypium hirsutum HOM05D007130 ORTHO05D002078 2.5e-35 153.7 215 41.9
Gohir.A02G032600 Gossypium hirsutum HOM05D007130 ORTHO05D002078 3.3e-35 153.3 364 33.5
Gohir.A09G216400 Gossypium hirsutum HOM05D007130 ORTHO05D002078 3.3e-35 153.3 215 41.9
Gorai.006G239800 Gossypium raimondii HOM05D007130 ORTHO05D002078 7.4e-35 152.1 215 41.4
BraA05t20581Z Brassica rapa HOM05D007130 ORTHO05D002078 1.1e-33 148.3 392 30.6
BcaC08g44270 Brassica carinata HOM05D007130 ORTHO05D002078 2.4e-33 147.1 392 30.9
Dinv44541 Davidia involucrata HOM05D007130 ORTHO05D002078 2.4e-33 147.1 258 39.5
A05p16760 Brassica napus HOM05D007130 ORTHO05D002078 6.9e-33 145.6 391 30.2
C06p16890 Brassica napus HOM05D007130 ORTHO05D002078 9.0e-33 145.2 392 30.6
BolC6t36885H Brassica oleracea HOM05D007130 ORTHO05D002078 9.0e-33 145.2 392 30.6
THA.LOC104808552 Tarenaya hassleriana HOM05D007130 ORTHO05D002078 9.0e-33 145.2 404 30.4
AT4G14840 Arabidopsis thaliana HOM05D007130 ORTHO05D002078 5.0e-31 139.4 396 29.3
BcaB02g07856 Brassica carinata HOM05D007130 ORTHO05D002078 6.5e-31 139.0 224 38.8
AL3G36830 Arabidopsis lyrata HOM05D007130 ORTHO05D002078 1.1e-30 138.3 406 29.6
Sp7g12990 Schrenkiella parvula HOM05D007130 ORTHO05D002078 1.1e-30 138.3 222 38.3
Aa31LG8G9060 Aethionema arabicum HOM05D007130 ORTHO05D002078 1.9e-30 137.5 400 30.5
Carub.0007s2727 Capsella rubella HOM05D007130 ORTHO05D002078 4.2e-30 136.3 219 38.8
Cfa015660 Carpinus fangiana HOM05D007130 ORTHO05D002078 5.5e-30 136.0 220 41.8
Thhalv10020335m.g Eutrema salsugineum HOM05D007130 ORTHO05D002078 5.5e-30 136.0 404 30.4
Sp3g20280 Schrenkiella parvula HOM05D007130 ORTHO05D002078 7.2e-30 135.6 402 31.1
Carub.0003s2268 Capsella rubella HOM05D007130 ORTHO05D002078 9.4e-30 135.2 403 28.3
Lalb_Chr09g0319881 Lupinus albus HOM05D007130 ORTHO05D002078 9.4e-30 135.2 327 31.8
AT3G22520 Arabidopsis thaliana HOM05D007130 ORTHO05D002078 2.1e-29 134.0 405 29.4
Cpa.g.sc58.97 Carica papaya HOM05D007130 ORTHO05D002078 2.1e-29 134.0 223 39.5
Haze_00888 Corylus avellana HOM05D007130 ORTHO05D002078 7.9e-29 132.1 220 38.2
SHI15430 Sapria himalayana HOM05D007130 ORTHO05D002078 3.0e-28 130.2 90 77.8
SHI31593 Sapria himalayana HOM05D000105 ORTHO05D000001 3.0e-28 130.2 137 56.9
CARHR098410 Cardamine hirsuta HOM05D007130 ORTHO05D002078 3.9e-28 129.8 412 29.1
CARHR221400 Cardamine hirsuta HOM05D007130 ORTHO05D002078 2.0e-27 127.5 390 28.7
Cc03_g03890 Coffea canephora HOM05D007130 ORTHO05D002078 2.5e-27 127.1 360 29.4
BcaC09g49178 Brassica carinata HOM05D007130 ORTHO05D002078 5.7e-27 125.9 220 35.9
C01p41760 Brassica napus HOM05D007130 ORTHO05D002078 5.7e-27 125.9 220 35.9
BolC1t04132H Brassica oleracea HOM05D007130 ORTHO05D002078 5.7e-27 125.9 220 35.9
BcaC05g28042 Brassica carinata HOM05D007130 ORTHO05D002078 7.4e-27 125.6 396 29.8
C05p40640 Brassica napus HOM05D007130 ORTHO05D002078 7.4e-27 125.6 396 29.8
BolC5t32803H Brassica oleracea HOM05D007130 ORTHO05D002078 7.4e-27 125.6 396 29.8
BcaB04g20515 Brassica carinata HOM05D007130 ORTHO05D002078 9.7e-27 125.2 400 28.2
BcaC05g28058 Brassica carinata HOM05D007130 ORTHO05D002078 9.7e-27 125.2 398 28.9
C05p40720 Brassica napus HOM05D007130 ORTHO05D002078 9.7e-27 125.2 398 28.9
BolC5t32817H Brassica oleracea HOM05D007130 ORTHO05D002078 9.7e-27 125.2 398 28.9
A03p42790 Brassica napus HOM05D007130 ORTHO05D002078 1.1e-25 121.7 219 34.7
BraA01t03389Z Brassica rapa HOM05D007130 ORTHO05D002078 1.8e-25 120.9 399 29.1
A01p32610 Brassica napus HOM05D007130 ORTHO05D002078 2.4e-25 120.6 400 29.0
BraA03t13426Z Brassica rapa HOM05D007130 ORTHO05D002078 2.4e-25 120.6 219 34.7
Aa31LG9G2460 Aethionema arabicum HOM05D007130 ORTHO05D002078 3.1e-25 120.2 408 27.5
BcaB06g26362 Brassica carinata HOM05D007130 ORTHO05D002078 1.2e-24 118.2 405 28.9
A05p26240 Brassica napus HOM05D007130 ORTHO05D002078 1.2e-24 118.2 393 28.5
MSTRG.9978 Avicennia marina HOM05D007130 ORTHO05D002078 2.0e-24 117.5 356 28.1
VMungo0720G1198 Vigna mungo HOM05D007130 ORTHO05D002078 4.5e-24 116.3 325 28.9
BcaC01g03442 Brassica carinata HOM05D007130 ORTHO05D002078 7.7e-24 115.5 219 33.8
C03p52560 Brassica napus HOM05D007130 ORTHO05D002078 7.7e-24 115.5 219 33.8
BraA05t21500Z Brassica rapa HOM05D007130 ORTHO05D002078 2.2e-23 114.0 402 28.1
Nitab4.5_0001342g0090 Nicotiana tabacum HOM05D007130 ORTHO05D002078 2.2e-23 114.0 272 30.5
BolC3t17525H Brassica oleracea HOM05D007130 ORTHO05D002078 5.0e-23 112.8 219 33.8
Glyma.10G127200 Glycine max HOM05D007130 ORTHO05D002078 1.4e-22 111.3 219 33.8
Glyma.20G078300 Glycine max HOM05D007130 ORTHO05D002078 3.2e-22 110.2 223 33.6
Solyc09g082130.4 Solanum lycopersicum HOM05D007130 ORTHO05D002078 3.2e-22 110.2 221 35.3
Sopen09g031010 Solanum pennellii HOM05D007130 ORTHO05D002078 3.2e-22 110.2 221 35.3
Phvul.007G237900 Phaseolus vulgaris HOM05D007130 ORTHO05D002078 1.2e-21 108.2 329 29.5
GSVIVG01023108001 Vitis vinifera HOM05D007130 ORTHO05D002078 1.2e-21 108.2 179 41.9
Nitab4.5_0004256g0020 Nicotiana tabacum HOM05D007130 ORTHO05D002078 3.6e-21 106.7 272 29.8
SGA_v2.0_scaffold39G15213 Striga asiatica HOM05D007130 ORTHO05D002078 6.7e-20 102.4 367 26.7
Peaxi162Scf00092g00720 Petunia axillaris HOM05D007130 ORTHO05D002078 8.8e-20 102.1 359 27.0
Phvul.010G080100 Phaseolus vulgaris HOM05D007130 ORTHO05D002078 4.4e-19 99.8 345 29.6
CAN.G1094.6 Capsicum annuum HOM05D007130 ORTHO05D002078 7.4e-19 99.0 277 30.0
Aa31sc50G40 Aethionema arabicum HOM05D007130 ORTHO05D002078 3.7e-18 96.7 174 36.8
Glyma.01G137900 Glycine max HOM05D007130 ORTHO05D002078 3.7e-18 96.7 349 28.9
Glyma.01G138200 Glycine max HOM05D007130 ORTHO05D002078 3.7e-18 96.7 349 28.9
VMungo0331G0902 Vigna mungo HOM05D007130 ORTHO05D002078 8.2e-18 95.5 358 30.2
Ciclev10005290m.g Citrus clementina HOM05D007130 ORTHO05D002078 3.1e-17 93.6 306 30.4
SHI32255 Sapria himalayana HOM05D007130 ORTHO05D002078 3.8e-15 86.7 95 52.6
DCAR_027220 Daucus carota HOM05D007130 ORTHO05D002078 9.7e-11 72.0 355 27.3
Cpa.g.sc79.63 Carica papaya HOM05D007130 ORTHO05D002078 1.3e-10 71.6 154 39.0
VMungo0265G0002 Vigna mungo HOM05D007130 ORTHO05D002078 4.5e-08 63.2 128 35.2
QL10p019789 Quercus lobata HOM05D007130 ORTHO05D002078 1.7e-07 61.2 307 22.1
SHI32252 Sapria himalayana HOM05D007130 ORTHO05D002078 5.0e-07 59.7 31 87.1


User provided reference genes

Program Settings