Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI42924 Sapria himalayana HOM05D010923 ORTHO05D003989 1.4e-53 212.6 100 100.0
SHI36351 Sapria himalayana HOM05D010923 ORTHO05D003989 9.9e-36 153.3 91 81.3
SHI40238 Sapria himalayana HOM05D010923 ORTHO05D003989 3.4e-28 128.3 86 73.3
SHI37256 Sapria himalayana HOM05D010923 ORTHO05D001219 2.4e-26 122.1 111 60.4
SHI23604 Sapria himalayana HOM05D000849 ORTHO05D003989 1.2e-25 119.8 76 73.7
SHI35822 Sapria himalayana HOM05D010923 ORTHO05D003989 2.7e-25 118.6 69 82.6
SHI46441 Sapria himalayana HOM05D010923 ORTHO05D003989 3.5e-25 118.2 103 62.1
SHI50902 Sapria himalayana HOM05D010923 ORTHO05D003989 2.3e-24 115.5 77 75.3
SHI49839 Sapria himalayana HOM05D010923 ORTHO05D003989 5.1e-24 114.4 92 65.2
SHI36761 Sapria himalayana HOM05D010923 ORTHO05D003989 9.6e-23 110.2 80 72.5
SHI51537 Sapria himalayana HOM05D000849 ORTHO05D003989 2.1e-22 109.0 74 74.3
SHI52555 Sapria himalayana HOM05D000849 ORTHO05D003989 6.2e-22 107.5 69 75.4
SHI52725 Sapria himalayana HOM05D000849 ORTHO05D003989 6.2e-22 107.5 70 75.7
SHI53623 Sapria himalayana HOM05D000849 ORTHO05D003989 6.2e-22 107.5 69 75.4
SHI35683 Sapria himalayana HOM05D000558 ORTHO05D001857 1.1e-21 106.7 69 72.5
SHI35267 Sapria himalayana HOM05D000849 ORTHO05D001857 1.0e-16 90.1 43 90.7
SHI42703 Sapria himalayana HOM05D000849 ORTHO05D003989 3.0e-16 88.6 62 75.8
SHI47843 Sapria himalayana HOM05D000849 ORTHO05D003989 6.7e-16 87.4 108 46.3
Duzib150G0327 Durio zibethinus HOM05D000849 ORTHO05D003989 8.7e-16 87.0 116 43.1
Duzib187G0631 Durio zibethinus HOM05D000849 ORTHO05D003989 8.7e-16 87.0 114 43.9
Gohir.A13G194600 Gossypium hirsutum HOM05D000849 ORTHO05D003989 8.7e-16 87.0 114 43.9
Gohir.D13G200300 Gossypium hirsutum HOM05D000849 ORTHO05D003989 8.7e-16 87.0 114 43.9
Gorai.013G229100 Gossypium raimondii HOM05D000849 ORTHO05D003989 8.7e-16 87.0 114 43.9
Thecc.09G096900 Theobroma cacao HOM05D000849 ORTHO05D003989 8.7e-16 87.0 116 43.1
Gohir.A05G027200 Gossypium hirsutum HOM05D000849 ORTHO05D003989 1.5e-15 86.3 113 44.2
Gohir.D05G029100 Gossypium hirsutum HOM05D000849 ORTHO05D003989 1.5e-15 86.3 113 44.2
Manes.03G029400 Manihot esculenta HOM05D000849 ORTHO05D003989 1.5e-15 86.3 116 42.2
Sabra06G0117900 Salix brachista HOM05D000849 ORTHO05D003989 1.5e-15 86.3 113 44.2
TWI63G0367 Tripterygium wilfordii HOM05D000849 ORTHO05D003989 1.5e-15 86.3 113 44.2
Atru.chr7.1508 Acer truncatum HOM05D000849 ORTHO05D003989 1.9e-15 85.9 113 44.2
Cpa.g.sc78.44 Carica papaya HOM05D000849 ORTHO05D003989 1.9e-15 85.9 113 44.2
Ciclev10009831m.g Citrus clementina HOM05D000849 ORTHO05D003989 1.9e-15 85.9 113 44.2
Manes.16G106500 Manihot esculenta HOM05D000849 ORTHO05D003989 1.9e-15 85.9 116 42.2
Potri.006G149100 Populus trichocarpa HOM05D000849 ORTHO05D003989 1.9e-15 85.9 113 43.4
SHI54080 Sapria himalayana HOM05D000849 ORTHO05D003989 1.9e-15 85.9 54 72.2
SHI51484 Sapria himalayana HOM05D000849 ORTHO05D003989 3.3e-15 85.1 71 64.8
AL3G48440 Arabidopsis lyrata HOM05D000849 ORTHO05D003989 4.3e-15 84.7 113 43.4
AT2G19790 Arabidopsis thaliana HOM05D000849 ORTHO05D003989 4.3e-15 84.7 113 43.4
BolC7t40613H Brassica oleracea HOM05D000849 ORTHO05D003989 4.3e-15 84.7 113 43.4
Carub.0003s3407 Capsella rubella HOM05D000849 ORTHO05D003989 4.3e-15 84.7 113 43.4
CARHR110250 Cardamine hirsuta HOM05D000849 ORTHO05D003989 4.3e-15 84.7 113 43.4
Sp3g33140 Schrenkiella parvula HOM05D000849 ORTHO05D003989 4.3e-15 84.7 113 43.4
FAN28G0398 Fragaria x ananassa HOM05D000849 ORTHO05D003989 7.4e-15 84.0 113 43.4
Gorai.009G029200 Gossypium raimondii HOM05D000849 ORTHO05D003989 7.4e-15 84.0 113 43.4
MD02G1069000 Malus domestica HOM05D000849 ORTHO05D003989 7.4e-15 84.0 113 43.4
RcHm_v2.0_Chr2g0092321 Rosa chinensis HOM05D000849 ORTHO05D003989 7.4e-15 84.0 113 43.4
BcaB03g16769 Brassica carinata HOM05D000849 ORTHO05D003989 9.6e-15 83.6 113 43.4
BcaC04g22820 Brassica carinata HOM05D000849 ORTHO05D003989 9.6e-15 83.6 113 42.5
BcaC06g36622 Brassica carinata HOM05D000849 ORTHO05D003989 9.6e-15 83.6 113 43.4
A07p00920 Brassica napus HOM05D000849 ORTHO05D003989 9.6e-15 83.6 113 43.4
A09p12580 Brassica napus HOM05D000849 ORTHO05D003989 9.6e-15 83.6 113 42.5
C07p02080 Brassica napus HOM05D000849 ORTHO05D003989 9.6e-15 83.6 113 43.4
C09p14940 Brassica napus HOM05D000849 ORTHO05D003989 9.6e-15 83.6 113 42.5
BolC9t54396H Brassica oleracea HOM05D000849 ORTHO05D003989 9.6e-15 83.6 113 42.5
BraA07t27892Z Brassica rapa HOM05D000849 ORTHO05D003989 9.6e-15 83.6 113 43.4
BraA09t36905Z Brassica rapa HOM05D000849 ORTHO05D003989 9.6e-15 83.6 113 42.5
Haze_25852 Corylus avellana HOM05D000849 ORTHO05D003989 9.6e-15 83.6 113 44.2
Dinv42272 Davidia involucrata HOM05D000849 ORTHO05D003989 9.6e-15 83.6 113 44.2
FvH4_1g06580 Fragaria vesca HOM05D000849 ORTHO05D003989 9.6e-15 83.6 113 42.5
FAN19G1758 Fragaria x ananassa HOM05D000849 ORTHO05D003989 9.6e-15 83.6 113 42.5
FAN26G0314 Fragaria x ananassa HOM05D000849 ORTHO05D003989 9.6e-15 83.6 113 42.5
FAN26G0318 Fragaria x ananassa HOM05D000849 ORTHO05D003989 9.6e-15 83.6 113 42.5
Peaxi162Scf00298g00114 Petunia axillaris HOM05D000849 ORTHO05D003989 9.6e-15 83.6 113 44.2
Prupe.7G216600 Prunus persica HOM05D000849 ORTHO05D003989 9.6e-15 83.6 113 43.4
Sed0020746 Sechium edule HOM05D000849 ORTHO05D003989 9.6e-15 83.6 116 42.2
Aa31LG8G16770 Aethionema arabicum HOM05D000849 ORTHO05D003989 1.3e-14 83.2 113 42.5
EL10Ac8g18347 Beta vulgaris HOM05D000849 ORTHO05D003989 1.3e-14 83.2 116 42.2
SHI01895 Sapria himalayana HOM05D000849 ORTHO05D003989 1.3e-14 83.2 50 70.0
CAN.G1058.10 Capsicum annuum HOM05D000849 ORTHO05D003989 1.6e-14 82.8 113 43.4
CiPaw.04G154300 Carya illinoinensis HOM05D000849 ORTHO05D003989 1.6e-14 82.8 113 43.4
MD15G1200600 Malus domestica HOM05D000849 ORTHO05D003989 1.6e-14 82.8 113 43.4
QL02p086970 Quercus lobata HOM05D000849 ORTHO05D003989 1.6e-14 82.8 113 43.4
THA.LOC104820037 Tarenaya hassleriana HOM05D000849 ORTHO05D003989 1.6e-14 82.8 113 42.5
HPP92_024117 Vanilla planifolia HOM05D000849 ORTHO05D003989 1.6e-14 82.8 113 43.4
Ah.09g230330 Amaranthus hybridus HOM05D000849 ORTHO05D003989 2.1e-14 82.4 113 43.4
CiPaw.03G221100 Carya illinoinensis HOM05D000849 ORTHO05D003989 2.1e-14 82.4 113 43.4
Eucgr.C00951 Eucalyptus grandis HOM05D000849 ORTHO05D003989 2.1e-14 82.4 113 43.4
PGR142G0605 Punica granatum HOM05D000849 ORTHO05D003989 2.1e-14 82.4 113 43.4
SHI35365 Sapria himalayana HOM05D000849 ORTHO05D003989 2.1e-14 82.4 52 69.2
Nitab4.5_0004180g0010 Nicotiana tabacum HOM05D000849 ORTHO05D003989 2.8e-14 82.0 116 41.4
THA.LOC104814582 Tarenaya hassleriana HOM05D000849 ORTHO05D003989 2.8e-14 82.0 113 40.7
vmacro06264 Vaccinium macrocarpon HOM05D000849 ORTHO05D003989 2.8e-14 82.0 116 41.4
Cc06_g10770 Coffea canephora HOM05D000849 ORTHO05D003989 3.7e-14 81.6 113 43.4
Phvul.004G173800 Phaseolus vulgaris HOM05D000849 ORTHO05D003989 3.7e-14 81.6 116 41.4
CDE05G3423 Ceratophyllum demersum HOM05D000849 ORTHO05D003989 4.8e-14 81.3 113 43.4
AUR62033272 Chenopodium quinoa HOM05D000849 ORTHO05D003989 4.8e-14 81.3 113 42.5
ECA236G3815 Erigeron canadensis HOM05D000849 ORTHO05D003989 4.8e-14 81.3 113 42.5
Lsat_1_v5_gn_8_88280 Lactuca sativa HOM05D000849 ORTHO05D003989 4.8e-14 81.3 113 42.5
Lalb_Chr14g0375221 Lupinus albus HOM05D000849 ORTHO05D003989 4.8e-14 81.3 113 42.5
Hund26299 Selenicereus undatus HOM05D000849 ORTHO05D003989 4.8e-14 81.3 113 42.5
CDE05G2264 Ceratophyllum demersum HOM05D000849 ORTHO05D003989 6.2e-14 80.9 113 42.5
Glyma.01G005300 Glycine max HOM05D000849 ORTHO05D003989 6.2e-14 80.9 113 42.5
Glyma.07G126300 Glycine max HOM05D000849 ORTHO05D003989 6.2e-14 80.9 113 42.5
MBI04_g06989_MAGBIO Magnolia biondii HOM05D000849 ORTHO05D003989 6.2e-14 80.9 113 41.6
Nn8g39010 Nelumbo nucifera HOM05D000849 ORTHO05D003989 6.2e-14 80.9 113 41.6
Sc08g0008140 Simmondsia chinensis HOM05D000849 ORTHO05D003989 6.2e-14 80.9 113 42.5
VMungo0464G2126 Vigna mungo HOM05D000849 ORTHO05D003989 6.2e-14 80.9 113 42.5
Aqoxy7G01359 Aquilegia oxysepala HOM05D000849 ORTHO05D003989 8.1e-14 80.5 113 41.6
arahy.Tifrunner.gnm1.ann1.URAI8Z Arachis hypogaea HOM05D000849 ORTHO05D003989 8.1e-14 80.5 113 42.5
arahy.Tifrunner.gnm1.ann1.XR2T8G Arachis hypogaea HOM05D000849 ORTHO05D003989 8.1e-14 80.5 113 42.5
MSTRG.19541 Avicennia marina HOM05D000849 ORTHO05D003989 8.1e-14 80.5 113 41.6
CSS0012070 Camellia sinensis var. sinensis HOM05D000849 ORTHO05D003989 8.1e-14 80.5 113 42.5
ClCG03G015970 Citrullus lanatus HOM05D000849 ORTHO05D003989 8.1e-14 80.5 113 43.4
MELO3C015429.2 Cucumis melo HOM05D000849 ORTHO05D003989 8.1e-14 80.5 113 43.4
CsaV3_1G039990 Cucumis sativus L. HOM05D000849 ORTHO05D003989 8.1e-14 80.5 113 43.4
Oeu036246.1 Olea europaea HOM05D000849 ORTHO05D003989 8.1e-14 80.5 113 41.6
TAR636G1139 Trochodendron aralioides HOM05D000849 ORTHO05D003989 8.1e-14 80.5 113 41.6
HPP92_009846 Vanilla planifolia HOM05D000849 ORTHO05D003989 8.1e-14 80.5 113 41.6
Mapoly0016s0005 Marchantia polymorpha HOM05D000849 ORTHO05D003989 1.1e-13 80.1 118 39.8
ATR0705G079 Amborella trichopoda HOM05D000849 ORTHO05D003989 1.4e-13 79.7 113 41.6
Migut.K00562 Erythranthe guttata HOM05D000849 ORTHO05D003989 1.4e-13 79.7 116 39.7
PSO210G0713 Papaver somniferum HOM05D000849 ORTHO05D003989 1.4e-13 79.7 113 40.7
PSO210G7720 Papaver somniferum HOM05D000849 ORTHO05D003989 1.4e-13 79.7 113 40.7
Pp3c14_14670 Physcomitrium patens HOM05D000849 ORTHO05D003989 1.4e-13 79.7 116 39.7
Actinidia17501 Actinidia chinensis HOM05D000849 ORTHO05D003989 1.8e-13 79.3 113 41.6
Aqoxy7G03958 Aquilegia oxysepala HOM05D000849 ORTHO05D003989 1.8e-13 79.3 113 39.8
Lj2g0010400 Lotus japonicus HOM05D000849 ORTHO05D003989 1.8e-13 79.3 113 41.6
SHI27184 Sapria himalayana HOM05D000849 ORTHO05D003989 1.8e-13 79.3 54 66.7
FAN08G2450 Fragaria x ananassa HOM05D000849 ORTHO05D003989 2.4e-13 79.0 113 41.6
SEGI_24636 Sequoiadendron giganteum HOM05D000849 ORTHO05D003989 2.4e-13 79.0 113 39.8
Solyc05g026130.3 Solanum lycopersicum HOM05D000849 ORTHO05D003989 2.4e-13 79.0 113 41.6
Sopen05g022340 Solanum pennellii HOM05D000849 ORTHO05D003989 2.4e-13 79.0 113 41.6
PGSC0003DMG400028942 Solanum tuberosum HOM05D000849 ORTHO05D003989 2.4e-13 79.0 113 41.6
unitig_26.g9704 Utricularia gibba HOM05D000849 ORTHO05D003989 2.4e-13 79.0 113 40.7
Lj4g0006741 Lotus japonicus HOM05D000849 ORTHO05D003989 3.1e-13 78.6 113 42.5
SGA_v2.0_scaffold279G46782 Striga asiatica HOM05D000849 ORTHO05D003989 3.1e-13 78.6 113 39.8
SGA_v2.0_scaffold302G47808 Striga asiatica HOM05D000849 ORTHO05D003989 3.1e-13 78.6 113 39.8
Phvul.002G306700 Phaseolus vulgaris HOM05D000849 ORTHO05D003989 4.0e-13 78.2 113 42.5
VMungo0251G1053 Vigna mungo HOM05D000849 ORTHO05D003989 4.0e-13 78.2 113 42.5
FAN18G0868 Fragaria x ananassa HOM05D000849 ORTHO05D003989 5.3e-13 77.8 113 40.7
FvH4_5g22770 Fragaria vesca HOM05D000849 ORTHO05D003989 6.9e-13 77.4 113 40.7
HanXRQChr09g0238561 Helianthus annuus HOM05D000849 ORTHO05D003989 6.9e-13 77.4 113 40.7
CBR_g2797 Chara braunii HOM05D000849 ORTHO05D003989 9.0e-13 77.0 113 40.7
Os08g0395300 Oryza sativa ssp. japonica HOM05D000849 ORTHO05D003989 9.0e-13 77.0 113 40.7
Medtr7g100010 Medicago truncatula HOM05D000849 ORTHO05D003989 1.5e-12 76.3 113 39.8
Medtr8g102180 Medicago truncatula HOM05D000849 ORTHO05D003989 1.5e-12 76.3 113 39.8
Os10g0368400 Oryza sativa ssp. japonica HOM05D000849 ORTHO05D003989 1.5e-12 76.3 113 39.8
GSVIVG01015270001 Vitis vinifera HOM05D000849 ORTHO05D003989 1.5e-12 76.3 113 40.7
Hma1.2p1_0663F.1_g198540 Hydrangea macrophylla HOM05D000849 ORTHO05D003989 2.0e-12 75.9 125 37.6
Ca_17379_v3 Cicer arietinum L. HOM05D000849 ORTHO05D003989 2.6e-12 75.5 113 39.8
Psat7g018560 Pisum sativum HOM05D000849 ORTHO05D003989 2.6e-12 75.5 113 39.8
TPR.G34776 Trifolium pratense HOM05D000849 ORTHO05D003989 2.6e-12 75.5 113 39.8
Zm00001eb178620 Zea mays HOM05D000849 ORTHO05D003989 5.8e-12 74.3 113 38.9
SMO196G0114 Selaginella moellendorffii HOM05D000849 ORTHO05D003989 7.6e-12 73.9 113 38.1
PSO832G0835 Papaver somniferum HOM05D000849 ORTHO05D003989 1.0e-11 73.6 113 37.2
MSTRG.6030 Avicennia marina HOM05D000849 ORTHO05D003989 1.3e-11 73.2 113 37.2
DCAR_028635 Daucus carota HOM05D000849 ORTHO05D003989 4.9e-11 71.2 91 45.1
Rhsim03G0235600 Rhododendron simsii HOM05D000849 ORTHO05D003989 6.5e-11 70.9 78 47.4
PSO063G4962 Papaver somniferum HOM05D000849 ORTHO05D003989 8.4e-11 70.5 113 36.3
PGR102G1239 Punica granatum HOM05D000849 ORTHO05D003989 1.4e-10 69.7 109 38.5
SHI43902 Sapria himalayana HOM05D010923 ORTHO05D003989 1.4e-10 69.7 40 82.5
SHI44502 Sapria himalayana HOM05D010923 ORTHO05D003989 1.4e-10 69.7 40 82.5
SHI47575 Sapria himalayana HOM05D010923 ORTHO05D003989 1.4e-10 69.7 40 82.5
SHI48148 Sapria himalayana HOM05D010923 ORTHO05D003989 1.4e-10 69.7 40 82.5
PSO782G5042 Papaver somniferum HOM05D000849 ORTHO05D003989 2.5e-10 68.9 113 35.4
SHI19583 Sapria himalayana HOM05D000849 ORTHO05D003989 1.2e-09 66.6 63 55.6
Thhalv10002117m.g Eutrema salsugineum HOM05D000849 ORTHO05D003989 6.0e-09 64.3 71 47.9
SHI48305 Sapria himalayana HOM05D000849 ORTHO05D003989 1.3e-08 63.2 77 46.8
SHI38667 Sapria himalayana HOM05D000849 ORTHO05D003989 3.0e-08 62.0 35 82.9
SHI33029 Sapria himalayana HOM05D000849 ORTHO05D003989 5.1e-08 61.2 35 77.1
Actinidia29881 Actinidia chinensis HOM05D000849 ORTHO05D003989 8.7e-08 60.5 73 47.9
SHI20141 Sapria himalayana HOM05D000849 ORTHO05D003989 1.1e-07 60.1 114 34.2
SHI53541 Sapria himalayana HOM05D000849 ORTHO05D003989 1.5e-07 59.7 35 74.3
SHI53653 Sapria himalayana HOM05D000849 ORTHO05D003989 1.5e-07 59.7 35 74.3
SHI35880 Sapria himalayana HOM05D000849 ORTHO05D003989 1.9e-07 59.3 31 80.6
SHI43903 Sapria himalayana HOM05D000849 ORTHO05D003989 1.9e-07 59.3 31 80.6
SHI44503 Sapria himalayana HOM05D000849 ORTHO05D003989 1.9e-07 59.3 31 80.6
SHI47576 Sapria himalayana HOM05D000849 ORTHO05D003989 1.9e-07 59.3 31 80.6
SHI48149 Sapria himalayana HOM05D000849 ORTHO05D003989 1.9e-07 59.3 31 80.6
SHI34978 Sapria himalayana HOM05D000849 ORTHO05D003989 2.5e-07 58.9 29 86.2
SHI50198 Sapria himalayana HOM05D000849 ORTHO05D003989 4.3e-07 58.2 29 86.2
SHI46084 Sapria himalayana HOM05D000849 ORTHO05D003989 9.6e-07 57.0 38 71.1
SHI34965 Sapria himalayana HOM05D000849 ORTHO05D003989 1.6e-06 56.2 26 92.3
SalBow6G5864 Salvia bowleyana HOM05D000849 ORTHO05D003989 2.1e-06 55.8 72 44.4
SHI52623 Sapria himalayana HOM05D000849 ORTHO05D003989 2.1e-06 55.8 33 75.8
SHI49175 Sapria himalayana HOM05D000849 ORTHO05D003989 6.2e-06 54.3 32 75.0


User provided reference genes

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