Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI42429 Sapria himalayana HOM05D000210 ORTHO05D005611 2.5e-33 144.8 70 100.0
SHI48848 Sapria himalayana HOM05D000210 ORTHO05D005611 1.1e-20 102.8 60 81.7
SHI38302 Sapria himalayana HOM05D000210 ORTHO05D005611 1.4e-20 102.4 58 84.5
SHI37090 Sapria himalayana HOM05D000210 ORTHO05D005611 3.4e-19 97.8 70 71.4
SHI47844 Sapria himalayana HOM05D000210 ORTHO05D005611 2.5e-17 91.7 56 78.6
SHI06056 Sapria himalayana HOM05D000210 ORTHO05D005611 4.2e-17 90.9 71 62.0
SHI46659 Sapria himalayana HOM05D000210 ORTHO05D005611 2.7e-16 88.2 60 68.3
SHI37216 Sapria himalayana HOM05D000210 ORTHO05D005611 2.3e-15 85.1 56 73.2
SHI46144 Sapria himalayana HOM05D000210 ORTHO05D005611 2.3e-15 85.1 58 70.7
SHI25125 Sapria himalayana HOM05D000210 ORTHO05D005611 1.5e-14 82.4 54 72.2
SHI53438 Sapria himalayana HOM05D000210 ORTHO05D005611 2.0e-14 82.0 69 59.4
SHI45297 Sapria himalayana HOM05D000210 ORTHO05D005611 2.6e-14 81.6 69 56.5
SHI49785 Sapria himalayana HOM05D000210 ORTHO05D005611 3.3e-14 81.3 67 56.7
SHI52541 Sapria himalayana HOM05D000210 ORTHO05D005611 3.3e-14 81.3 58 65.5
SHI37736 Sapria himalayana HOM05D000210 ORTHO05D005611 4.4e-14 80.9 53 69.8
SHI40250 Sapria himalayana HOM05D000210 ORTHO05D005611 1.3e-13 79.3 54 68.5
SHI30996 Sapria himalayana HOM05D000210 ORTHO05D005611 1.1e-12 76.3 63 61.9
SHI33220 Sapria himalayana HOM05D000024 ORTHO05D000007 7.0e-12 73.6 60 53.3
SHI50845 Sapria himalayana HOM05D000210 ORTHO05D005611 1.0e-10 69.7 57 54.4
CANSAT25G2778 Cannabis sativa HOM05D000210 ORTHO05D005611 2.9e-10 68.2 47 68.1
SHI33437 Sapria himalayana HOM05D000210 ORTHO05D005611 3.8e-10 67.8 46 69.6
Cfa006073 Carpinus fangiana HOM05D000210 ORTHO05D005611 4.2e-09 64.3 60 55.0
SHI47299 Sapria himalayana HOM05D000210 ORTHO05D005611 4.2e-09 64.3 54 50.0
SHI49437 Sapria himalayana HOM05D000210 ORTHO05D005611 4.2e-09 64.3 54 48.1
QL12p023065 Quercus lobata HOM05D000210 ORTHO05D005611 5.5e-09 63.9 60 55.0
Haze_04777 Corylus avellana HOM05D000210 ORTHO05D005611 9.4e-09 63.2 60 53.3
Glyma.03G149400 Glycine max HOM05D000210 ORTHO05D005611 1.6e-08 62.4 60 51.7
MD11G1293000 Malus domestica HOM05D000210 ORTHO05D005611 1.6e-08 62.4 60 51.7
Atru.chr5.1322 Acer truncatum HOM05D000210 ORTHO05D005611 2.7e-08 61.6 60 50.0
arahy.Tifrunner.gnm1.ann1.2F1JWB Arachis hypogaea HOM05D002837 ORTHO05D005611 4.7e-08 60.8 60 50.0
TPR.G32800 Trifolium pratense HOM05D000210 ORTHO05D005611 4.7e-08 60.8 61 49.2
SHI51201 Sapria himalayana HOM05D000210 ORTHO05D005611 6.1e-08 60.5 51 52.9
CiPaw.07G096700 Carya illinoinensis HOM05D000210 ORTHO05D005611 1.0e-07 59.7 47 59.6
SHI22068 Sapria himalayana HOM05D000210 ORTHO05D005611 1.0e-07 59.7 41 65.9
VMungo1383G3377 Vigna mungo HOM05D000210 ORTHO05D005611 1.0e-07 59.7 60 48.3
Gohir.A08G184800 Gossypium hirsutum HOM05D000210 ORTHO05D005611 1.4e-07 59.3 60 51.7
Gorai.004G214900 Gossypium raimondii HOM05D000210 ORTHO05D005611 1.4e-07 59.3 60 51.7
Prupe.8G248400 Prunus persica HOM05D000210 ORTHO05D005611 1.4e-07 59.3 47 59.6
COL.COLO4_09151 Corchorus olitorius HOM05D000210 ORTHO05D005611 1.8e-07 58.9 70 45.7
RcHm_v2.0_Chr6g0292061 Rosa chinensis HOM05D000210 ORTHO05D005611 1.8e-07 58.9 63 47.6
SHI48588 Sapria himalayana HOM05D000210 ORTHO05D005611 2.3e-07 58.5 54 46.3
Nn4g26117 Nelumbo nucifera HOM05D000210 ORTHO05D005611 3.0e-07 58.2 60 46.7
Duzib138G1044 Durio zibethinus HOM05D000210 ORTHO05D005611 4.0e-07 57.8 70 45.7
FvH4_2g24250 Fragaria vesca HOM05D000210 ORTHO05D005611 4.0e-07 57.8 63 46.0
FAN24G2823 Fragaria x ananassa HOM05D000210 ORTHO05D005611 4.0e-07 57.8 63 46.0
Phvul.001G147300 Phaseolus vulgaris HOM05D000210 ORTHO05D005611 4.0e-07 57.8 60 48.3
Gohir.D08G202984 Gossypium hirsutum HOM05D000210 ORTHO05D005611 5.2e-07 57.4 60 50.0
Lj1g0017777 Lotus japonicus HOM05D000210 ORTHO05D005611 5.2e-07 57.4 60 50.0
SHI48058 Sapria himalayana HOM05D000210 ORTHO05D005611 5.2e-07 57.4 54 46.3
SHI53918 Sapria himalayana HOM05D000210 ORTHO05D005611 5.2e-07 57.4 51 51.0
TAR633G2129 Trochodendron aralioides HOM05D000210 ORTHO05D005611 5.2e-07 57.4 60 50.0
Medtr7g094190 Medicago truncatula HOM05D000210 ORTHO05D005611 6.7e-07 57.0 60 45.0
Psat3g066840 Pisum sativum HOM05D000210 ORTHO05D005611 6.7e-07 57.0 60 46.7
Thecc.01G286500 Theobroma cacao HOM05D000210 ORTHO05D005611 6.7e-07 57.0 70 44.3
SHI37032 Sapria himalayana HOM05D000210 ORTHO05D005611 8.8e-07 56.6 31 77.4
SHI38642 Sapria himalayana HOM05D000210 ORTHO05D005611 8.8e-07 56.6 31 77.4
Dinv11271 Davidia involucrata HOM05D000210 ORTHO05D005611 1.2e-06 56.2 59 47.5
CSS0008686 Camellia sinensis var. sinensis HOM05D000210 ORTHO05D005611 1.5e-06 55.8 60 48.3
AUR62034578 Chenopodium quinoa HOM05D000210 ORTHO05D005611 1.5e-06 55.8 60 48.3
CDE09G1445 Ceratophyllum demersum HOM05D000210 ORTHO05D005611 2.0e-06 55.5 47 53.2
arahy.Tifrunner.gnm1.ann1.11MVEE Arachis hypogaea HOM05D000210 ORTHO05D005611 2.6e-06 55.1 60 43.3
arahy.Tifrunner.gnm1.ann1.CG37GB Arachis hypogaea HOM05D000210 ORTHO05D005611 2.6e-06 55.1 60 43.3
arahy.Tifrunner.gnm1.ann1.M0CDH9 Arachis hypogaea HOM05D000210 ORTHO05D005611 2.6e-06 55.1 60 43.3
Ca_08554_v3 Cicer arietinum L. HOM05D000210 ORTHO05D005611 2.6e-06 55.1 60 45.0
Ca_08588_v3 Cicer arietinum L. HOM05D000210 ORTHO05D005611 2.6e-06 55.1 60 45.0
FAN15G3364 Fragaria x ananassa HOM05D000210 ORTHO05D005611 3.3e-06 54.7 63 44.4
CSS0026102 Camellia sinensis var. sinensis HOM05D000210 ORTHO05D005611 4.4e-06 54.3 60 46.7
Potri.014G136800 Populus trichocarpa HOM05D000210 ORTHO05D005611 4.4e-06 54.3 60 46.7
GSVIVG01011052001 Vitis vinifera HOM05D000210 ORTHO05D005611 4.4e-06 54.3 60 46.7
Medtr7g094330 Medicago truncatula HOM05D000210 ORTHO05D005611 5.7e-06 53.9 47 53.2
SHI38774 Sapria himalayana HOM05D000210 ORTHO05D005611 5.7e-06 53.9 28 82.1
SHI50019 Sapria himalayana HOM05D000210 ORTHO05D005611 7.5e-06 53.5 41 63.4
Ah.08g212840 Amaranthus hybridus HOM05D000210 ORTHO05D005611 9.7e-06 53.1 60 45.0
MSTRG.21588 Avicennia marina HOM05D000210 ORTHO05D005611 9.7e-06 53.1 47 55.3
CSS0038921 Camellia sinensis var. sinensis HOM05D000210 ORTHO05D005611 9.7e-06 53.1 60 45.0
SHI28944 Sapria himalayana HOM05D000210 ORTHO05D005611 9.7e-06 53.1 27 77.8


User provided reference genes

Program Settings