Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI42405 Sapria himalayana HOM05D000614 ORTHO05D000463 1.4e-77 292.7 136 100.0
GSVIVG01008033001 Vitis vinifera HOM05D000614 ORTHO05D000463 5.7e-10 68.2 86 40.7
TWI15G0449 Tripterygium wilfordii HOM05D000614 ORTHO05D000463 7.4e-10 67.8 97 39.2
Gohir.A07G070800 Gossypium hirsutum HOM05D000614 ORTHO05D000463 1.7e-09 66.6 126 32.5
Potri.015G063200 Populus trichocarpa HOM05D000614 ORTHO05D000463 2.2e-09 66.2 96 36.5
Gohir.D07G075300 Gossypium hirsutum HOM05D000614 ORTHO05D000463 2.8e-09 65.9 126 32.5
Aa31LG4G4770 Aethionema arabicum HOM05D000614 ORTHO05D000463 6.3e-09 64.7 99 35.4
Duzib068G0975 Durio zibethinus HOM05D000614 ORTHO05D000463 6.3e-09 64.7 95 36.8
Thecc.03G083100 Theobroma cacao HOM05D000614 ORTHO05D000463 8.2e-09 64.3 126 32.5
Duzib084G0456 Durio zibethinus HOM05D000614 ORTHO05D000463 1.1e-08 63.9 115 33.9
QL10p016232 Quercus lobata HOM05D000614 ORTHO05D000463 1.1e-08 63.9 95 36.8
MD16G1075300 Malus domestica HOM05D000614 ORTHO05D000463 1.8e-08 63.2 97 34.0
BraA02t06981Z Brassica rapa HOM05D000614 ORTHO05D000463 2.4e-08 62.8 118 33.1
Sabra15G0088400 Salix brachista HOM05D000614 ORTHO05D000463 2.4e-08 62.8 96 34.4
Manes.14G076400 Manihot esculenta HOM05D000614 ORTHO05D000463 3.1e-08 62.4 126 31.0
TAR629G2770 Trochodendron aralioides HOM05D000614 ORTHO05D000463 3.1e-08 62.4 98 33.7
AT1G14330 Arabidopsis thaliana HOM05D000614 ORTHO05D000463 4.1e-08 62.0 94 33.0
Haze_07349 Corylus avellana HOM05D000614 ORTHO05D000463 4.1e-08 62.0 95 35.8
MD13G1074100 Malus domestica HOM05D000614 ORTHO05D000463 4.1e-08 62.0 97 33.0
TAR371G0779 Trochodendron aralioides HOM05D000614 ORTHO05D000463 4.1e-08 62.0 95 33.7
Zm00001eb114990 Zea mays HOM05D000614 ORTHO05D000463 4.1e-08 62.0 86 36.0
CAN.G66.10 Capsicum annuum HOM05D000614 ORTHO05D000463 5.3e-08 61.6 94 31.9
Cfa018967 Carpinus fangiana HOM05D000614 ORTHO05D000463 5.3e-08 61.6 95 35.8
Cc11_g13250 Coffea canephora HOM05D000614 ORTHO05D000463 5.3e-08 61.6 98 31.6
COL.COLO4_35508 Corchorus olitorius HOM05D000614 ORTHO05D000463 5.3e-08 61.6 95 34.7
Hma1.2p1_0265F.1_g106650 Hydrangea macrophylla HOM05D000614 ORTHO05D000463 5.3e-08 61.6 96 34.4
Oeu020866.1 Olea europaea HOM05D000614 ORTHO05D000463 5.3e-08 61.6 98 34.7
Aa31LG1G720 Aethionema arabicum HOM05D000614 ORTHO05D000463 7.0e-08 61.2 96 32.3
COL.COLO4_38448 Corchorus olitorius HOM05D000614 ORTHO05D000463 7.0e-08 61.2 92 37.0
CARHR014760 Cardamine hirsuta HOM05D000614 ORTHO05D000463 9.1e-08 60.8 94 33.0
Solyc04g005670.3 Solanum lycopersicum HOM05D000614 ORTHO05D000463 9.1e-08 60.8 96 32.3
Sopen04g001720 Solanum pennellii HOM05D000614 ORTHO05D000463 9.1e-08 60.8 96 32.3
TPR.G39835 Trifolium pratense HOM05D000614 ORTHO05D000463 9.1e-08 60.8 105 34.3
Carub.0001s1401 Capsella rubella HOM05D000614 ORTHO05D000463 1.2e-07 60.5 94 31.9
AUR62021716 Chenopodium quinoa HOM05D000614 ORTHO05D000463 1.2e-07 60.5 97 35.1
Hma1.2p1_0598F.1_g186740 Hydrangea macrophylla HOM05D000614 ORTHO05D000463 1.2e-07 60.5 107 31.8
Zm00001eb167290 Zea mays HOM05D000614 ORTHO05D000463 1.2e-07 60.5 86 36.0
DCAR_007145 Daucus carota HOM05D000614 ORTHO05D000463 1.5e-07 60.1 98 31.6
DCAR_031031 Daucus carota HOM05D000614 ORTHO05D000463 1.5e-07 60.1 98 31.6
Os11g0602800 Oryza sativa ssp. japonica HOM05D000614 ORTHO05D000463 1.5e-07 60.1 86 34.9
PSO017G4653 Papaver somniferum HOM05D000614 ORTHO05D000463 1.5e-07 60.1 91 36.3
PGSC0003DMG400002826 Solanum tuberosum HOM05D000614 ORTHO05D000463 1.5e-07 60.1 96 32.3
TWI81G0350 Tripterygium wilfordii HOM05D000614 ORTHO05D000463 1.5e-07 60.1 97 32.0
EL10Ac6g13178 Beta vulgaris HOM05D000614 ORTHO05D000463 2.0e-07 59.7 99 32.3
CiPaw.11G041900 Carya illinoinensis HOM05D000614 ORTHO05D000463 2.0e-07 59.7 96 34.4
Dinv19936 Davidia involucrata HOM05D000614 ORTHO05D000463 2.0e-07 59.7 92 33.7
Actinidia31200 Actinidia chinensis HOM05D000614 ORTHO05D000463 2.6e-07 59.3 99 32.3
Eucgr.B03422 Eucalyptus grandis HOM05D000614 ORTHO05D000463 2.6e-07 59.3 101 32.7
Oeu054903.1 Olea europaea HOM05D000614 ORTHO05D000463 2.6e-07 59.3 98 33.7
Ah.11g048580 Amaranthus hybridus HOM05D000614 ORTHO05D000463 3.4e-07 58.9 95 33.7
Glyma.04G172300 Glycine max HOM05D000614 ORTHO05D000463 3.4e-07 58.9 95 33.7
Glyma.06G191900 Glycine max HOM05D000614 ORTHO05D000463 3.4e-07 58.9 95 33.7
Oeu013626.1 Olea europaea HOM05D000614 ORTHO05D000463 3.4e-07 58.9 98 31.6
Peaxi162Scf00541g00068 Petunia axillaris HOM05D000614 ORTHO05D000463 3.4e-07 58.9 96 31.2
Sc14g0008290 Simmondsia chinensis HOM05D000614 ORTHO05D000463 3.4e-07 58.9 107 32.7
CSS0010118 Camellia sinensis var. sinensis HOM05D000614 ORTHO05D000463 4.5e-07 58.5 99 31.3
CSS0046340 Camellia sinensis var. sinensis HOM05D000614 ORTHO05D000463 4.5e-07 58.5 99 31.3
TAR374G1663 Trochodendron aralioides HOM05D000614 ORTHO05D000463 5.9e-07 58.2 95 31.6
VMungo1309G0186 Vigna mungo HOM05D000614 ORTHO05D000463 5.9e-07 58.2 95 33.7
AT1G74510 Arabidopsis thaliana HOM05D000614 ORTHO05D000463 7.7e-07 57.8 102 31.4
MSTRG.688 Avicennia marina HOM05D000614 ORTHO05D000463 7.7e-07 57.8 96 32.3
Oeu054899.1 Olea europaea HOM05D000614 ORTHO05D000463 7.7e-07 57.8 95 33.7
BcaB08g34386 Brassica carinata HOM05D000614 ORTHO05D000463 1.0e-06 57.4 86 33.7
CAN.G2055.1 Capsicum annuum HOM05D000614 ORTHO05D000463 1.0e-06 57.4 114 29.8
Psat0s1149g0080 Pisum sativum HOM05D000614 ORTHO05D000463 1.0e-06 57.4 121 30.6
Psat7g127680 Pisum sativum HOM05D000614 ORTHO05D000463 1.0e-06 57.4 121 30.6
Duzib205G1273 Durio zibethinus HOM05D000614 ORTHO05D000463 1.3e-06 57.0 95 34.7
Sc12g0006260 Simmondsia chinensis HOM05D000614 ORTHO05D000463 1.3e-06 57.0 96 32.3
BcaB02g06956 Brassica carinata HOM05D000614 ORTHO05D000463 1.7e-06 56.6 97 32.0
BcaC07g41579 Brassica carinata HOM05D000614 ORTHO05D000463 1.7e-06 56.6 86 33.7
C08p45800 Brassica napus HOM05D000614 ORTHO05D000463 1.7e-06 56.6 86 33.7
BolC8t52133H Brassica oleracea HOM05D000614 ORTHO05D000463 1.7e-06 56.6 86 33.7
AUR62028808 Chenopodium quinoa HOM05D000614 ORTHO05D000463 1.7e-06 56.6 99 31.3
Thhalv10018558m.g Eutrema salsugineum HOM05D000614 ORTHO05D000463 1.7e-06 56.6 100 31.0
unitig_749.g13233 Utricularia gibba HOM05D000614 ORTHO05D000463 1.7e-06 56.6 98 31.6
AT2G02870 Arabidopsis thaliana HOM05D000614 ORTHO05D000463 2.2e-06 56.2 98 30.6
AUR62005752 Chenopodium quinoa HOM05D000614 ORTHO05D000463 2.2e-06 56.2 99 31.3
FAN07G1028 Fragaria x ananassa HOM05D000614 ORTHO05D000463 2.2e-06 56.2 98 31.6
Lalb_Chr11g0071591 Lupinus albus HOM05D000614 ORTHO05D000463 2.2e-06 56.2 95 33.7
Actinidia19865 Actinidia chinensis HOM05D000614 ORTHO05D000463 2.9e-06 55.8 98 30.6
AL2G34390 Arabidopsis lyrata HOM05D000614 ORTHO05D000463 2.9e-06 55.8 102 31.4
CDE05G0503 Ceratophyllum demersum HOM05D000614 ORTHO05D000463 2.9e-06 55.8 117 32.5
Lalb_Chr08g0235811 Lupinus albus HOM05D000614 ORTHO05D000463 2.9e-06 55.8 95 33.7
Medtr4g022400 Medicago truncatula HOM05D000614 ORTHO05D000463 2.9e-06 55.8 92 33.7
PSO832G4455 Papaver somniferum HOM05D000614 ORTHO05D000463 2.9e-06 55.8 86 33.7
Prupe.1G271900 Prunus persica HOM05D000614 ORTHO05D000463 2.9e-06 55.8 107 33.6
Rhsim12G0061500 Rhododendron simsii HOM05D000614 ORTHO05D000463 2.9e-06 55.8 96 31.2
unitig_699.g19917 Utricularia gibba HOM05D000614 ORTHO05D000463 2.9e-06 55.8 104 28.8
Aqoxy3G00695 Aquilegia oxysepala HOM05D000614 ORTHO05D000463 3.8e-06 55.5 86 34.9
AL1G26210 Arabidopsis lyrata HOM05D000614 ORTHO05D000463 3.8e-06 55.5 94 29.8
Nn3g17183 Nelumbo nucifera HOM05D000614 ORTHO05D000463 3.8e-06 55.5 88 35.2
CDE05G3278 Ceratophyllum demersum HOM05D000614 ORTHO05D000463 5.0e-06 55.1 117 31.6
Duzib248G1147 Durio zibethinus HOM05D000614 ORTHO05D000463 5.0e-06 55.1 104 32.7
Lalb_Chr04g0256181 Lupinus albus HOM05D000614 ORTHO05D000463 5.0e-06 55.1 96 30.2
Phvul.003G067300 Phaseolus vulgaris HOM05D000614 ORTHO05D000463 5.0e-06 55.1 95 30.5
BraA09t41589Z Brassica rapa HOM05D000614 ORTHO05D000463 6.5e-06 54.7 86 32.6
CAN.G1024.4 Capsicum annuum HOM05D000614 ORTHO05D000463 6.5e-06 54.7 114 28.1
DCAR_027403 Daucus carota HOM05D000614 ORTHO05D000463 6.5e-06 54.7 98 28.6
HanXRQChr12g0382921 Helianthus annuus HOM05D000614 ORTHO05D000463 6.5e-06 54.7 97 30.9
TPR.G34730 Trifolium pratense HOM05D000614 ORTHO05D000463 6.5e-06 54.7 93 32.3
BcaC03g17174 Brassica carinata HOM05D000614 ORTHO05D000463 8.5e-06 54.3 95 28.4
A07p29360 Brassica napus HOM05D000614 ORTHO05D000463 8.5e-06 54.3 98 31.6
C02p50970 Brassica napus HOM05D000614 ORTHO05D000463 8.5e-06 54.3 95 28.4
C06p33250 Brassica napus HOM05D000614 ORTHO05D000463 8.5e-06 54.3 98 31.6
BolC2t11189H Brassica oleracea HOM05D000614 ORTHO05D000463 8.5e-06 54.3 95 28.4
BolC6t38439H Brassica oleracea HOM05D000614 ORTHO05D000463 8.5e-06 54.3 98 31.6
BraA02t08339Z Brassica rapa HOM05D000614 ORTHO05D000463 8.5e-06 54.3 95 28.4
BraA07t30574Z Brassica rapa HOM05D000614 ORTHO05D000463 8.5e-06 54.3 98 31.6
Eucgr.B00462 Eucalyptus grandis HOM05D000614 ORTHO05D000463 8.5e-06 54.3 95 33.7
FAN17G0787 Fragaria x ananassa HOM05D000614 ORTHO05D000463 8.5e-06 54.3 98 30.6
MD14G1197300 Malus domestica HOM05D000614 ORTHO05D000463 8.5e-06 54.3 93 32.3
Nitab4.5_0001488g0050 Nicotiana tabacum HOM05D000614 ORTHO05D000463 8.5e-06 54.3 91 31.9
Nitab4.5_0002151g0020 Nicotiana tabacum HOM05D000614 ORTHO05D000463 8.5e-06 54.3 96 29.2
VMungo0251G1746 Vigna mungo HOM05D000614 ORTHO05D000463 8.5e-06 54.3 95 30.5


User provided reference genes

Program Settings