Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI42229 Sapria himalayana HOM05D000076 ORTHO05D002916 7.5e-43 176.8 90 100.0
SHI41304 Sapria himalayana HOM05D000076 ORTHO05D369013 1.2e-19 99.8 66 75.8
SHI42300 Sapria himalayana HOM05D000076 ORTHO05D367984 4.6e-16 87.8 78 64.1
SHI14951 Sapria himalayana HOM05D000076 ORTHO05D002916 7.8e-16 87.0 70 68.6
Lsat_1_v5_gn_3_45540 Lactuca sativa HOM05D000076 ORTHO05D002916 3.1e-12 75.1 70 61.4
HanXRQChr13g0402541 Helianthus annuus HOM05D000076 ORTHO05D002916 9.0e-12 73.6 70 58.6
ECA246G2625 Erigeron canadensis HOM05D000076 ORTHO05D002916 1.5e-11 72.8 70 58.6
Potri.013G056200 Populus trichocarpa HOM05D000076 ORTHO05D002916 4.4e-11 71.2 71 57.7
Aqoxy7G00520 Aquilegia oxysepala HOM05D000076 ORTHO05D002916 5.8e-11 70.9 71 54.9
Lsat_1_v5_gn_8_126741 Lactuca sativa HOM05D000076 ORTHO05D002916 1.3e-10 69.7 70 54.3
Prupe.7G006400 Prunus persica HOM05D000076 ORTHO05D002916 1.3e-10 69.7 71 52.1
GSVIVG01016152001 Vitis vinifera HOM05D000076 ORTHO05D002916 1.3e-10 69.7 70 55.7
CSS0015655 Camellia sinensis var. sinensis HOM05D000076 ORTHO05D002916 1.7e-10 69.3 70 55.7
CSS0016249 Camellia sinensis var. sinensis HOM05D000076 ORTHO05D002916 1.7e-10 69.3 70 55.7
FvH4_1g28330 Fragaria vesca HOM05D000076 ORTHO05D002916 1.7e-10 69.3 71 52.1
FAN19G2127 Fragaria x ananassa HOM05D000076 ORTHO05D002916 1.7e-10 69.3 71 52.1
FAN23G0880 Fragaria x ananassa HOM05D000076 ORTHO05D002916 1.7e-10 69.3 71 52.1
Potri.019G036600 Populus trichocarpa HOM05D000076 ORTHO05D002916 1.7e-10 69.3 71 54.9
Sabra19G0048100 Salix brachista HOM05D000076 ORTHO05D002916 1.7e-10 69.3 71 54.9
Thecc.05G247600 Theobroma cacao HOM05D000076 ORTHO05D002916 1.7e-10 69.3 71 54.9
FAN26G1506 Fragaria x ananassa HOM05D000076 ORTHO05D002916 2.2e-10 68.9 71 52.1
Ciclev10019212m.g Citrus clementina HOM05D000076 ORTHO05D002916 2.9e-10 68.6 71 54.9
FAN28G0693 Fragaria x ananassa HOM05D000076 ORTHO05D002916 3.8e-10 68.2 71 50.7
Manes.09G139700 Manihot esculenta HOM05D000076 ORTHO05D002916 3.8e-10 68.2 71 54.9
RcHm_v2.0_Chr3g0496781 Rosa chinensis HOM05D000076 ORTHO05D002916 3.8e-10 68.2 71 53.5
Cpa.g.sc51.143 Carica papaya HOM05D000076 ORTHO05D002916 4.9e-10 67.8 71 53.5
Cfa017668 Carpinus fangiana HOM05D000076 ORTHO05D002916 4.9e-10 67.8 71 54.9
THA.LOC104820779 Tarenaya hassleriana HOM05D000076 ORTHO05D002916 4.9e-10 67.8 71 52.1
Dinv19093 Davidia involucrata HOM05D000076 ORTHO05D002916 6.4e-10 67.4 70 54.3
Sabra13G0050000 Salix brachista HOM05D000076 ORTHO05D002916 6.4e-10 67.4 71 54.9
TPR.G2869 Trifolium pratense HOM05D000076 ORTHO05D002916 6.4e-10 67.4 71 52.1
TWI34G0718 Tripterygium wilfordii HOM05D000076 ORTHO05D002916 8.4e-10 67.0 71 54.9
AT3G03810 Arabidopsis thaliana HOM05D000076 ORTHO05D002916 1.1e-09 66.6 71 52.1
A03p33440 Brassica napus HOM05D000076 ORTHO05D002916 1.1e-09 66.6 71 50.7
BolC1t05804H Brassica oleracea HOM05D000076 ORTHO05D002916 1.1e-09 66.6 71 50.7
BraA03t12519Z Brassica rapa HOM05D000076 ORTHO05D002916 1.1e-09 66.6 71 50.7
Dinv17146 Davidia involucrata HOM05D000076 ORTHO05D002916 1.1e-09 66.6 70 54.3
Sp3g02790 Schrenkiella parvula HOM05D000076 ORTHO05D002916 1.1e-09 66.6 71 50.7
TAR636G2623 Trochodendron aralioides HOM05D000076 ORTHO05D002916 1.1e-09 66.6 70 54.3
AL3G13670 Arabidopsis lyrata HOM05D000076 ORTHO05D002916 1.4e-09 66.2 71 52.1
A01p41300 Brassica napus HOM05D000076 ORTHO05D002916 1.4e-09 66.2 71 50.7
BNapus_Darmor_BZH_scaffold_78p00410 Brassica napus HOM05D000076 ORTHO05D002916 1.4e-09 66.2 71 50.7
BraA01t04554Z Brassica rapa HOM05D000076 ORTHO05D002916 1.4e-09 66.2 71 50.7
CANSAT11G1727 Cannabis sativa HOM05D000076 ORTHO05D002916 1.4e-09 66.2 72 50.0
Duzib128G0208 Durio zibethinus HOM05D000076 ORTHO05D002916 1.4e-09 66.2 71 53.5
Thhalv10020245m.g Eutrema salsugineum HOM05D000076 ORTHO05D002916 1.4e-09 66.2 71 52.1
HanXRQChr13g0389041 Helianthus annuus HOM05D000076 ORTHO05D002916 1.4e-09 66.2 72 52.8
EL10Ac4g08904 Beta vulgaris HOM05D000076 ORTHO05D002916 1.9e-09 65.9 70 52.9
BcaC01g04390 Brassica carinata HOM05D000076 ORTHO05D002916 1.9e-09 65.9 71 50.7
CARHR077890 Cardamine hirsuta HOM05D000076 ORTHO05D002916 1.9e-09 65.9 71 52.1
MD12G1006300 Malus domestica HOM05D000076 ORTHO05D002916 1.9e-09 65.9 71 50.7
PGR042G0755 Punica granatum HOM05D000076 ORTHO05D002916 1.9e-09 65.9 71 53.5
TWI32G1262 Tripterygium wilfordii HOM05D000076 ORTHO05D002916 1.9e-09 65.9 71 53.5
Carub.0003s0298 Capsella rubella HOM05D000076 ORTHO05D002916 2.4e-09 65.5 71 52.1
Haze_20483 Corylus avellana HOM05D000076 ORTHO05D002916 2.4e-09 65.5 71 53.5
MD14G1003900 Malus domestica HOM05D000076 ORTHO05D002916 2.4e-09 65.5 71 50.7
ClCG10G013520 Citrullus lanatus HOM05D000076 ORTHO05D002916 3.2e-09 65.1 71 50.7
Gohir.D08G235900 Gossypium hirsutum HOM05D000076 ORTHO05D002916 3.2e-09 65.1 71 52.1
Gorai.004G250700 Gossypium raimondii HOM05D000076 ORTHO05D002916 3.2e-09 65.1 71 52.1
Lj4C250G3 Lonicera japonica HOM05D000076 ORTHO05D002916 3.2e-09 65.1 70 50.0
Lalb_Chr20g0112221 Lupinus albus HOM05D000076 ORTHO05D002916 3.2e-09 65.1 71 50.7
Psat5g072360 Pisum sativum HOM05D000076 ORTHO05D002916 3.2e-09 65.1 71 50.7
Sed0028011 Sechium edule HOM05D000076 ORTHO05D002916 3.2e-09 65.1 71 50.7
HPP92_001618 Vanilla planifolia HOM05D000076 ORTHO05D002916 3.2e-09 65.1 70 52.9
Aa31LG5G14360 Aethionema arabicum HOM05D000076 ORTHO05D002916 4.2e-09 64.7 71 50.7
C03p40640 Brassica napus HOM05D000076 ORTHO05D002916 4.2e-09 64.7 71 49.3
THA.LOC104802875 Tarenaya hassleriana HOM05D000076 ORTHO05D002916 4.2e-09 64.7 71 52.1
AUR62004746 Chenopodium quinoa HOM05D000076 ORTHO05D002916 5.4e-09 64.3 70 50.0
Hund06860 Selenicereus undatus HOM05D000076 ORTHO05D002916 5.4e-09 64.3 69 53.6
MELO3C026619.2 Cucumis melo HOM05D000076 ORTHO05D002916 7.1e-09 63.9 71 49.3
CsaV3_3G043120 Cucumis sativus L. HOM05D000076 ORTHO05D002916 7.1e-09 63.9 71 49.3
Oeu015304.1 Olea europaea HOM05D000076 ORTHO05D002916 7.1e-09 63.9 70 50.0
Sed0007012 Sechium edule HOM05D000076 ORTHO05D002916 7.1e-09 63.9 70 51.4
Actinidia39899 Actinidia chinensis HOM05D000076 ORTHO05D002916 9.3e-09 63.5 70 51.4
ATR1101G077 Amborella trichopoda HOM05D000076 ORTHO05D002916 9.3e-09 63.5 71 45.1
BolC3t16329H Brassica oleracea HOM05D000076 ORTHO05D002916 9.3e-09 63.5 71 49.3
Gorai.007G260400 Gossypium raimondii HOM05D000076 ORTHO05D002916 9.3e-09 63.5 71 53.5
MBI14_g10256_MAGBIO Magnolia biondii HOM05D000076 ORTHO05D002916 9.3e-09 63.5 70 52.9
Ah.06g191480 Amaranthus hybridus HOM05D000076 ORTHO05D002916 1.2e-08 63.2 70 51.4
DCAR_003395 Daucus carota HOM05D000076 ORTHO05D002916 1.2e-08 63.2 70 51.4
Eucgr.F02920 Eucalyptus grandis HOM05D000076 ORTHO05D002916 1.2e-08 63.2 70 48.6
Gohir.A13G165400 Gossypium hirsutum HOM05D000076 ORTHO05D002916 1.2e-08 63.2 71 50.7
PSO478G0753 Papaver somniferum HOM05D000076 ORTHO05D002916 1.2e-08 63.2 71 49.3
PSO782G5413 Papaver somniferum HOM05D000076 ORTHO05D002916 1.2e-08 63.2 71 49.3
Lj5g0008397 Lotus japonicus HOM05D000076 ORTHO05D002916 1.6e-08 62.8 71 50.7
Phvul.009G045900 Phaseolus vulgaris HOM05D000076 ORTHO05D002916 1.6e-08 62.8 71 52.1
BcaNung07117 Brassica carinata HOM05D000076 ORTHO05D002916 2.1e-08 62.4 72 48.6
Gohir.A11G233600 Gossypium hirsutum HOM05D000076 ORTHO05D002916 2.1e-08 62.4 71 52.1
Gohir.D13G168400 Gossypium hirsutum HOM05D000076 ORTHO05D002916 2.1e-08 62.4 71 50.7
Gorai.013G193700 Gossypium raimondii HOM05D000076 ORTHO05D002916 2.1e-08 62.4 71 50.7
TAR633G0673 Trochodendron aralioides HOM05D000076 ORTHO05D002916 2.1e-08 62.4 71 52.1
Ah.04g162890 Amaranthus hybridus HOM05D000076 ORTHO05D002916 2.7e-08 62.0 70 50.0
Cc10_g13780 Coffea canephora HOM05D000076 ORTHO05D002916 2.7e-08 62.0 83 42.2
Gohir.A08G218800 Gossypium hirsutum HOM05D000076 ORTHO05D002916 2.7e-08 62.0 69 52.2
Nitab4.5_0000418g0040 Nicotiana tabacum HOM05D000076 ORTHO05D002916 2.7e-08 62.0 70 52.9
SGA_v2.0_scaffold24G10422 Striga asiatica HOM05D000076 ORTHO05D002916 2.7e-08 62.0 70 48.6
Gohir.D11G244800 Gossypium hirsutum HOM05D000076 ORTHO05D002916 3.5e-08 61.6 69 53.6
Manes.08G145700 Manihot esculenta HOM05D000076 ORTHO05D002916 3.5e-08 61.6 70 52.9
CAN.G531.11 Capsicum annuum HOM05D000076 ORTHO05D002916 4.6e-08 61.2 70 51.4
Glyma.04G229200 Glycine max HOM05D000076 ORTHO05D002916 4.6e-08 61.2 71 52.1
Sc20g0000940 Simmondsia chinensis HOM05D000076 ORTHO05D002916 4.6e-08 61.2 70 50.0
Solyc06g059980.3 Solanum lycopersicum HOM05D000076 ORTHO05D002916 4.6e-08 61.2 70 54.3
Sopen06g020080 Solanum pennellii HOM05D000076 ORTHO05D002916 4.6e-08 61.2 70 54.3
CiPaw.10G126700 Carya illinoinensis HOM05D000076 ORTHO05D002916 6.0e-08 60.8 68 50.0
Glyma.06G135600 Glycine max HOM05D000076 ORTHO05D002916 6.0e-08 60.8 71 50.7
Lalb_Chr25g0288701 Lupinus albus HOM05D000076 ORTHO05D002916 6.0e-08 60.8 71 50.7
Nitab4.5_0005166g0040 Nicotiana tabacum HOM05D000076 ORTHO05D002916 6.0e-08 60.8 70 52.9
ATR0691G111 Amborella trichopoda HOM05D000076 ORTHO05D002916 1.0e-07 60.1 90 40.0
Medtr3g092590 Medicago truncatula HOM05D000076 ORTHO05D002916 1.0e-07 60.1 71 49.3
SalBow7G1221 Salvia bowleyana HOM05D000076 ORTHO05D002916 1.0e-07 60.1 70 45.7
SalBow7G3057 Salvia bowleyana HOM05D000076 ORTHO05D002916 1.0e-07 60.1 70 45.7
VMungo1309G0305 Vigna mungo HOM05D000076 ORTHO05D002916 1.0e-07 60.1 71 50.7
Eucgr.I02072 Eucalyptus grandis HOM05D000076 ORTHO05D002916 1.7e-07 59.3 70 48.6
Peaxi162Scf00591g00714 Petunia axillaris HOM05D000076 ORTHO05D002916 1.7e-07 59.3 70 50.0
vmacro15438 Vaccinium macrocarpon HOM05D000076 ORTHO05D002916 2.3e-07 58.9 69 50.7
Migut.C01067 Erythranthe guttata HOM05D000076 ORTHO05D002916 3.9e-07 58.2 68 48.5
Rhsim02G0037000 Rhododendron simsii HOM05D000076 ORTHO05D002916 3.9e-07 58.2 69 49.3
CiPaw.03G082300 Carya illinoinensis HOM05D000076 ORTHO05D002916 5.1e-07 57.8 70 48.6
Lsat_1_v5_gn_2_89501 Lactuca sativa HOM05D000076 ORTHO05D002916 5.1e-07 57.8 70 48.6
Potri.017G101600 Populus trichocarpa HOM05D000076 ORTHO05D002916 5.1e-07 57.8 70 50.0
Sabra17G0087400 Salix brachista HOM05D000076 ORTHO05D002916 5.1e-07 57.8 70 50.0
MSTRG.25358 Avicennia marina HOM05D000076 ORTHO05D002916 8.7e-07 57.0 70 47.1
Cpa.g.sc14.243 Carica papaya HOM05D000076 ORTHO05D002916 8.7e-07 57.0 70 45.7
Ca_06435_v3 Cicer arietinum L. HOM05D000076 ORTHO05D002916 8.7e-07 57.0 72 47.2
Hma1.2p1_2258F.1_g318310 Hydrangea macrophylla HOM05D000076 ORTHO05D002916 8.7e-07 57.0 70 47.1
Potri.004G113200 Populus trichocarpa HOM05D000076 ORTHO05D002916 8.7e-07 57.0 69 49.3
Sed0010971 Sechium edule HOM05D000076 ORTHO05D002916 8.7e-07 57.0 69 47.8
SEGI_37276 Sequoiadendron giganteum HOM05D000076 ORTHO05D002916 8.7e-07 57.0 71 46.5
CSS0026674 Camellia sinensis var. sinensis HOM05D000076 ORTHO05D002916 1.1e-06 56.6 70 48.6
SEGI_35713 Sequoiadendron giganteum HOM05D000076 ORTHO05D002916 1.1e-06 56.6 71 45.1
arahy.Tifrunner.gnm1.ann1.705WIK Arachis hypogaea HOM05D000076 ORTHO05D002916 1.5e-06 56.2 71 45.1
BcaC06g33716 Brassica carinata HOM05D000076 ORTHO05D002916 1.5e-06 56.2 70 50.0
A06p39730 Brassica napus HOM05D000076 ORTHO05D002916 1.5e-06 56.2 70 50.0
C07p38540 Brassica napus HOM05D000076 ORTHO05D002916 1.5e-06 56.2 70 50.0
BolC7t44376H Brassica oleracea HOM05D000076 ORTHO05D002916 1.5e-06 56.2 70 50.0
BraA06t26888Z Brassica rapa HOM05D000076 ORTHO05D002916 1.5e-06 56.2 70 50.0
Haze_14373 Corylus avellana HOM05D000076 ORTHO05D002916 1.5e-06 56.2 70 47.1
Dinv34902 Davidia involucrata HOM05D000076 ORTHO05D002916 1.5e-06 56.2 70 47.1
AL5G19980 Arabidopsis lyrata HOM05D000076 ORTHO05D002916 1.9e-06 55.8 70 48.6
Dinv33874 Davidia involucrata HOM05D000076 ORTHO05D002916 1.9e-06 55.8 70 45.7
Oeu033414.1 Olea europaea HOM05D000076 ORTHO05D002916 1.9e-06 55.8 70 47.1
Sabra04G0071900 Salix brachista HOM05D000076 ORTHO05D002916 1.9e-06 55.8 69 47.8
Carub.0005s0857 Capsella rubella HOM05D000076 ORTHO05D002916 2.5e-06 55.5 70 48.6
ECA238G1612 Erigeron canadensis HOM05D000076 ORTHO05D002916 2.5e-06 55.5 70 47.1
Thhalv10003752m.g Eutrema salsugineum HOM05D000076 ORTHO05D002916 2.5e-06 55.5 70 48.6
HanXRQChr07g0200031 Helianthus annuus HOM05D000076 ORTHO05D002916 2.5e-06 55.5 70 47.1
THA.LOC104805530 Tarenaya hassleriana HOM05D000076 ORTHO05D002916 2.5e-06 55.5 70 48.6
GSVIVG01036531001 Vitis vinifera HOM05D000076 ORTHO05D002916 2.5e-06 55.5 70 47.1
MSTRG.2970 Avicennia marina HOM05D000076 ORTHO05D002916 3.3e-06 55.1 70 42.9
CARHR153340 Cardamine hirsuta HOM05D000076 ORTHO05D002916 3.3e-06 55.1 70 48.6
CDE10G0386 Ceratophyllum demersum HOM05D000076 ORTHO05D002916 3.3e-06 55.1 70 44.3
ClCG07G016100 Citrullus lanatus HOM05D000076 ORTHO05D002916 3.3e-06 55.1 70 45.7
Gohir.A11G160000 Gossypium hirsutum HOM05D000076 ORTHO05D002916 3.3e-06 55.1 72 43.1
Nn3g17556 Nelumbo nucifera HOM05D000076 ORTHO05D002916 3.3e-06 55.1 70 45.7
Oeu007088.1 Olea europaea HOM05D000076 ORTHO05D002916 3.3e-06 55.1 70 47.1
Os05g0132500 Oryza sativa ssp. japonica HOM05D000076 ORTHO05D002916 3.3e-06 55.1 70 42.9
Sp2g18140 Schrenkiella parvula HOM05D000076 ORTHO05D002916 3.3e-06 55.1 70 47.1
TAR622G1034 Trochodendron aralioides HOM05D000076 ORTHO05D002916 3.3e-06 55.1 70 44.3
TAR629G0603 Trochodendron aralioides HOM05D000076 ORTHO05D002916 3.3e-06 55.1 70 44.3
Gohir.D11G166100 Gossypium hirsutum HOM05D000076 ORTHO05D002916 4.3e-06 54.7 69 44.9
Gorai.007G177200 Gossypium raimondii HOM05D000076 ORTHO05D002916 4.3e-06 54.7 69 44.9
PSO063G1679 Papaver somniferum HOM05D000076 ORTHO05D002916 4.3e-06 54.7 72 41.7
PSO782G5740 Papaver somniferum HOM05D000076 ORTHO05D002916 4.3e-06 54.7 72 41.7
QL02p065106 Quercus lobata HOM05D000076 ORTHO05D002916 4.3e-06 54.7 70 45.7
AT3G30300 Arabidopsis thaliana HOM05D000076 ORTHO05D002916 5.6e-06 54.3 70 47.1
Cfa007702 Carpinus fangiana HOM05D000076 ORTHO05D002916 5.6e-06 54.3 69 46.4
MELO3C018902.2 Cucumis melo HOM05D000076 ORTHO05D002916 5.6e-06 54.3 70 44.3
CsaV3_4G009760 Cucumis sativus L. HOM05D000076 ORTHO05D002916 5.6e-06 54.3 70 44.3
Migut.H00579 Erythranthe guttata HOM05D000076 ORTHO05D002916 5.6e-06 54.3 70 45.7
MBI14_g40426_MAGBIO Magnolia biondii HOM05D000076 ORTHO05D002916 5.6e-06 54.3 69 46.4
MD17G1066700 Malus domestica HOM05D000076 ORTHO05D002916 5.6e-06 54.3 72 43.1
BcaC06g30849 Brassica carinata HOM05D000076 ORTHO05D002916 7.3e-06 53.9 70 48.6
Cc07_g04560 Coffea canephora HOM05D000076 ORTHO05D002916 7.3e-06 53.9 70 45.7
Sc11g0008870 Simmondsia chinensis HOM05D000076 ORTHO05D002916 7.3e-06 53.9 72 44.4
Thecc.04G107900 Theobroma cacao HOM05D000076 ORTHO05D002916 7.3e-06 53.9 69 44.9
vmacro05609 Vaccinium macrocarpon HOM05D000076 ORTHO05D002916 7.3e-06 53.9 69 46.4
Aa31LG2G3730 Aethionema arabicum HOM05D000076 ORTHO05D002916 9.6e-06 53.5 70 45.7
Aqoxy3G03759 Aquilegia oxysepala HOM05D000076 ORTHO05D002916 9.6e-06 53.5 70 47.1
BcaB04g19354 Brassica carinata HOM05D000076 ORTHO05D002916 9.6e-06 53.5 62 48.4
Duzib133G0963 Durio zibethinus HOM05D000076 ORTHO05D002916 9.6e-06 53.5 69 43.5
MD09G1076000 Malus domestica HOM05D000076 ORTHO05D002916 9.6e-06 53.5 72 43.1
Manes.02G060200 Manihot esculenta HOM05D000076 ORTHO05D002916 9.6e-06 53.5 70 42.9
Rhsim10G0059900 Rhododendron simsii HOM05D000076 ORTHO05D002916 9.6e-06 53.5 69 47.8
SGA_v2.0_scaffold4G02354 Striga asiatica HOM05D000076 ORTHO05D002916 9.6e-06 53.5 70 44.3


User provided reference genes

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