Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI41578 Sapria himalayana HOM05D000222 ORTHO05D025877 5.5e-36 153.7 73 100.0
SHI41736 Sapria himalayana HOM05D000222 ORTHO05D025877 5.5e-36 153.7 73 100.0
SHI37909 Sapria himalayana HOM05D010388 ORTHO05D000329 5.0e-21 104.0 72 73.6
SHI42688 Sapria himalayana HOM05D000222 ORTHO05D025877 1.1e-12 76.3 72 58.3
SHI43105 Sapria himalayana HOM05D000222 ORTHO05D000329 1.2e-11 72.8 51 68.6
SHI36236 Sapria himalayana HOM05D000222 ORTHO05D000329 1.6e-11 72.4 72 55.6
SHI39305 Sapria himalayana HOM05D000222 ORTHO05D000329 1.6e-11 72.4 72 55.6
SHI37841 Sapria himalayana HOM05D000222 ORTHO05D000329 4.0e-10 67.8 52 65.4
SHI40204 Sapria himalayana HOM05D000222 ORTHO05D000329 1.5e-09 65.9 36 83.3
SHI42154 Sapria himalayana HOM05D000222 ORTHO05D000329 2.0e-09 65.5 72 48.6
SHI41072 Sapria himalayana HOM05D000222 ORTHO05D000329 4.4e-09 64.3 33 87.9
SHI38417 Sapria himalayana HOM05D000222 ORTHO05D000329 5.8e-09 63.9 32 90.6
SHI38598 Sapria himalayana HOM05D000222 ORTHO05D000329 5.8e-09 63.9 34 85.3
SHI43457 Sapria himalayana HOM05D000222 ORTHO05D000329 5.8e-09 63.9 32 90.6
SHI40515 Sapria himalayana HOM05D000222 ORTHO05D000329 7.5e-09 63.5 33 84.8
SHI40777 Sapria himalayana HOM05D000222 ORTHO05D000329 7.5e-09 63.5 36 80.6
SHI40420 Sapria himalayana HOM05D000222 ORTHO05D000329 9.8e-09 63.2 36 80.6
SHI42404 Sapria himalayana HOM05D000222 ORTHO05D000329 9.8e-09 63.2 36 80.6
SHI45073 Sapria himalayana HOM05D000222 ORTHO05D000329 9.8e-09 63.2 36 80.6
SHI36157 Sapria himalayana HOM05D000222 ORTHO05D000329 1.3e-08 62.8 36 77.8
SHI39056 Sapria himalayana HOM05D000222 ORTHO05D000329 1.7e-08 62.4 36 77.8
SHI35748 Sapria himalayana HOM05D000222 ORTHO05D000329 2.9e-08 61.6 36 77.8
MSTRG.1183 Avicennia marina HOM05D000222 ORTHO05D000329 3.7e-08 61.2 36 72.2
Os06g0716700 Oryza sativa ssp. japonica HOM05D000222 ORTHO05D000329 3.7e-08 61.2 36 72.2
HPP92_012933 Vanilla planifolia HOM05D000222 ORTHO05D000329 3.7e-08 61.2 36 75.0
Zm00001eb228120 Zea mays HOM05D000222 ORTHO05D000329 3.7e-08 61.2 36 72.2
Zm00001eb272290 Zea mays HOM05D000222 ORTHO05D000329 3.7e-08 61.2 36 72.2
Ciclev10000296m.g Citrus clementina HOM05D000222 ORTHO05D000329 4.9e-08 60.8 36 75.0
Migut.N03167 Erythranthe guttata HOM05D000222 ORTHO05D000329 4.9e-08 60.8 36 72.2
SHI16969 Sapria himalayana HOM05D000222 ORTHO05D000329 4.9e-08 60.8 34 82.4
SHI27310 Sapria himalayana HOM05D000222 ORTHO05D000329 4.9e-08 60.8 36 77.8
MSTRG.25258 Avicennia marina HOM05D000222 ORTHO05D000329 6.4e-08 60.5 36 69.4
ClCG08G014210 Citrullus lanatus HOM05D000222 ORTHO05D000329 6.4e-08 60.5 36 72.2
MELO3C011021.2 Cucumis melo HOM05D000222 ORTHO05D000329 6.4e-08 60.5 36 72.2
CsaV3_2G029630 Cucumis sativus L. HOM05D000222 ORTHO05D000329 6.4e-08 60.5 36 72.2
Duzib093G0379 Durio zibethinus HOM05D000222 ORTHO05D000329 6.4e-08 60.5 36 72.2
Duzib116G0368 Durio zibethinus HOM05D000222 ORTHO05D000329 6.4e-08 60.5 36 72.2
Gohir.A01G110500 Gossypium hirsutum HOM05D000222 ORTHO05D000329 6.4e-08 60.5 36 72.2
Gohir.A06G002800 Gossypium hirsutum HOM05D000222 ORTHO05D000329 6.4e-08 60.5 36 72.2
Gohir.A06G002900 Gossypium hirsutum HOM05D000222 ORTHO05D000329 6.4e-08 60.5 36 72.2
Gohir.D01G097100 Gossypium hirsutum HOM05D000222 ORTHO05D000329 6.4e-08 60.5 36 72.2
Gohir.D06G005800 Gossypium hirsutum HOM05D000222 ORTHO05D000329 6.4e-08 60.5 36 72.2
Gohir.D06G005900 Gossypium hirsutum HOM05D000222 ORTHO05D000329 6.4e-08 60.5 36 72.2
Gorai.002G122800 Gossypium raimondii HOM05D000222 ORTHO05D000329 6.4e-08 60.5 36 72.2
Gorai.010G003000 Gossypium raimondii HOM05D000222 ORTHO05D000329 6.4e-08 60.5 36 72.2
Lalb_Chr03g0033421 Lupinus albus HOM05D000222 ORTHO05D000329 6.4e-08 60.5 36 75.0
Lalb_Chr19g0131441 Lupinus albus HOM05D000222 ORTHO05D000329 6.4e-08 60.5 36 75.0
SalBow8G4062 Salvia bowleyana HOM05D000222 ORTHO05D000329 6.4e-08 60.5 36 72.2
SHI14783 Sapria himalayana HOM05D000222 ORTHO05D000329 6.4e-08 60.5 46 60.9
Sed0002325 Sechium edule HOM05D000222 ORTHO05D000329 6.4e-08 60.5 36 72.2
Sed0003929 Sechium edule HOM05D000222 ORTHO05D000329 6.4e-08 60.5 36 72.2
SGA_v2.0_scaffold11G05934 Striga asiatica HOM05D000222 ORTHO05D000329 6.4e-08 60.5 36 72.2
Thecc.08G046300 Theobroma cacao HOM05D000222 ORTHO05D000329 6.4e-08 60.5 36 72.2
AT4G24190 Arabidopsis thaliana HOM05D000222 ORTHO05D000329 8.3e-08 60.1 36 69.4
SHI29975 Sapria himalayana HOM05D000222 ORTHO05D000329 8.3e-08 60.1 30 90.0
SHI31449 Sapria himalayana HOM05D000222 ORTHO05D000329 8.3e-08 60.1 34 79.4
SHI35686 Sapria himalayana HOM05D000222 ORTHO05D000329 8.3e-08 60.1 32 84.4
SHI36219 Sapria himalayana HOM05D000222 ORTHO05D000329 8.3e-08 60.1 30 90.0
SHI48379 Sapria himalayana HOM05D000222 ORTHO05D000329 8.3e-08 60.1 35 77.1
AL7G29090 Arabidopsis lyrata HOM05D000222 ORTHO05D000329 1.1e-07 59.7 36 69.4
BcaC09g50898 Brassica carinata HOM05D000222 ORTHO05D000329 1.1e-07 59.7 36 69.4
BcaNung01125 Brassica carinata HOM05D000222 ORTHO05D000329 1.1e-07 59.7 36 69.4
A01p15520 Brassica napus HOM05D000222 ORTHO05D000329 1.1e-07 59.7 36 69.4
A03p55100 Brassica napus HOM05D000222 ORTHO05D000329 1.1e-07 59.7 36 69.4
A08p21570 Brassica napus HOM05D000222 ORTHO05D000329 1.1e-07 59.7 36 69.4
C01p19440 Brassica napus HOM05D000222 ORTHO05D000329 1.1e-07 59.7 36 69.4
C07p53420 Brassica napus HOM05D000222 ORTHO05D000329 1.1e-07 59.7 36 69.4
BolC1t01873H Brassica oleracea HOM05D000222 ORTHO05D000329 1.1e-07 59.7 36 69.4
BolC7t45836H Brassica oleracea HOM05D000222 ORTHO05D000329 1.1e-07 59.7 36 69.4
BraA01t01491Z Brassica rapa HOM05D000222 ORTHO05D000329 1.1e-07 59.7 36 69.4
BraA03t14570Z Brassica rapa HOM05D000222 ORTHO05D000329 1.1e-07 59.7 36 69.4
BraA08t34104Z Brassica rapa HOM05D000222 ORTHO05D000329 1.1e-07 59.7 36 69.4
Carub.0007s1690 Capsella rubella HOM05D000222 ORTHO05D000329 1.1e-07 59.7 36 69.4
CARHR231600 Cardamine hirsuta HOM05D000222 ORTHO05D000329 1.1e-07 59.7 36 69.4
Migut.C00851 Erythranthe guttata HOM05D000222 ORTHO05D000329 1.1e-07 59.7 36 69.4
Thhalv10024414m.g Eutrema salsugineum HOM05D000222 ORTHO05D000329 1.1e-07 59.7 36 69.4
Lj4C798T7 Lonicera japonica HOM05D000222 ORTHO05D000329 1.1e-07 59.7 36 72.2
SHI37158 Sapria himalayana HOM05D000222 ORTHO05D000329 1.1e-07 59.7 37 73.0
SHI38423 Sapria himalayana HOM05D000222 ORTHO05D000329 1.1e-07 59.7 36 77.8
SHI39705 Sapria himalayana HOM05D000222 ORTHO05D000329 1.1e-07 59.7 29 89.7
Sp7g22160 Schrenkiella parvula HOM05D000222 ORTHO05D000329 1.1e-07 59.7 36 69.4
Sc02g0008650 Simmondsia chinensis HOM05D000222 ORTHO05D000329 1.1e-07 59.7 36 72.2
THA.LOC104813226 Tarenaya hassleriana HOM05D000222 ORTHO05D000329 1.1e-07 59.7 36 66.7
arahy.Tifrunner.gnm1.ann1.P8FSM4 Arachis hypogaea HOM05D000222 ORTHO05D000329 1.4e-07 59.3 36 72.2
arahy.Tifrunner.gnm1.ann1.T76A9L Arachis hypogaea HOM05D000222 ORTHO05D000329 1.4e-07 59.3 36 72.2
CANSAT78G1241 Cannabis sativa HOM05D000222 ORTHO05D000329 1.4e-07 59.3 36 72.2
CAN.G311.42 Capsicum annuum HOM05D000222 ORTHO05D000329 1.4e-07 59.3 36 72.2
CDE05G1631 Ceratophyllum demersum HOM05D000222 ORTHO05D000329 1.4e-07 59.3 36 72.2
DCAR_023014 Daucus carota HOM05D000222 ORTHO05D000329 1.4e-07 59.3 36 72.2
Hma1.2p1_0733F.1_g210310 Hydrangea macrophylla HOM05D000222 ORTHO05D000329 1.4e-07 59.3 36 72.2
Manes.18G012200 Manihot esculenta HOM05D000222 ORTHO05D000329 1.4e-07 59.3 36 72.2
Manes.18G012500 Manihot esculenta HOM05D000222 ORTHO05D000329 1.4e-07 59.3 36 72.2
Oeu046282.1 Olea europaea HOM05D000222 ORTHO05D000329 1.4e-07 59.3 36 69.4
Peaxi162Scf00553g00086 Petunia axillaris HOM05D000222 ORTHO05D000329 1.4e-07 59.3 36 72.2
Solyc04g081570.3 Solanum lycopersicum HOM05D000222 ORTHO05D000329 1.4e-07 59.3 36 72.2
Sopen04g035180 Solanum pennellii HOM05D000222 ORTHO05D000329 1.4e-07 59.3 36 72.2
PGSC0003DMG400009940 Solanum tuberosum HOM05D000222 ORTHO05D000329 1.4e-07 59.3 36 72.2
TWI12G1180 Tripterygium wilfordii HOM05D000222 ORTHO05D000329 1.4e-07 59.3 36 72.2
TWI56G0657 Tripterygium wilfordii HOM05D000222 ORTHO05D000329 1.4e-07 59.3 36 72.2
EL10Ac1g02175 Beta vulgaris HOM05D000222 ORTHO05D000329 1.9e-07 58.9 36 69.4
AUR62040542 Chenopodium quinoa HOM05D000222 ORTHO05D000329 1.9e-07 58.9 36 69.4
AUR62041482 Chenopodium quinoa HOM05D000222 ORTHO05D000329 1.9e-07 58.9 36 69.4
Ca_13433_v3 Cicer arietinum L. HOM05D000222 ORTHO05D000329 1.9e-07 58.9 36 72.2
Cc10_g01540 Coffea canephora HOM05D000222 ORTHO05D000329 1.9e-07 58.9 36 69.4
COL.COLO4_26130 Corchorus olitorius HOM05D000222 ORTHO05D000329 1.9e-07 58.9 36 69.4
Glyma.14G219700 Glycine max HOM05D000222 ORTHO05D000329 1.9e-07 58.9 36 72.2
Glyma.17G258700 Glycine max HOM05D000222 ORTHO05D000329 1.9e-07 58.9 36 72.2
Lj5g0005976 Lotus japonicus HOM05D000222 ORTHO05D000329 1.9e-07 58.9 36 72.2
Phvul.001G005200 Phaseolus vulgaris HOM05D000222 ORTHO05D000329 1.9e-07 58.9 36 72.2
SHI08058 Sapria himalayana HOM05D000222 ORTHO05D000329 1.9e-07 58.9 36 72.2
SHI38891 Sapria himalayana HOM05D000222 ORTHO05D000329 1.9e-07 58.9 32 87.5
SHI41830 Sapria himalayana HOM05D000222 ORTHO05D000329 1.9e-07 58.9 28 92.9
Sc15g0004910 Simmondsia chinensis HOM05D000222 ORTHO05D000329 1.9e-07 58.9 36 69.4
VMungo0647G1547 Vigna mungo HOM05D000222 ORTHO05D000329 1.9e-07 58.9 36 72.2
BolC8t48563H Brassica oleracea HOM05D000222 ORTHO05D000329 2.4e-07 58.5 36 66.7
Lj4C22T9 Lonicera japonica HOM05D000222 ORTHO05D000329 2.4e-07 58.5 36 72.2
Lalb_Chr08g0246171 Lupinus albus HOM05D000222 ORTHO05D000329 2.4e-07 58.5 36 69.4
Lalb_Chr11g0061831 Lupinus albus HOM05D000222 ORTHO05D000329 2.4e-07 58.5 36 69.4
Nitab4.5_0000337g0060 Nicotiana tabacum HOM05D000222 ORTHO05D000329 2.4e-07 58.5 36 72.2
Nitab4.5_0000337g0070 Nicotiana tabacum HOM05D000222 ORTHO05D000329 2.4e-07 58.5 36 72.2
Nitab4.5_0003251g0080 Nicotiana tabacum HOM05D000222 ORTHO05D000329 2.4e-07 58.5 36 72.2
Peaxi162Scf00553g00114 Petunia axillaris HOM05D000222 ORTHO05D000329 2.4e-07 58.5 36 72.2
SHI36455 Sapria himalayana HOM05D000222 ORTHO05D025877 2.4e-07 58.5 36 75.0
CDE05G2968 Ceratophyllum demersum HOM05D000222 ORTHO05D000329 3.2e-07 58.2 36 69.4
MBI05_g33509_MAGBIO Magnolia biondii HOM05D000222 ORTHO05D000329 3.2e-07 58.2 36 69.4
PSO541G0316 Papaver somniferum HOM05D000222 ORTHO05D000329 3.2e-07 58.2 36 69.4
PSO675G6717 Papaver somniferum HOM05D000222 ORTHO05D000329 3.2e-07 58.2 36 69.4
Psat6g002360 Pisum sativum HOM05D000222 ORTHO05D000329 3.2e-07 58.2 36 69.4
QL02p011881 Quercus lobata HOM05D000222 ORTHO05D000329 3.2e-07 58.2 36 69.4
RhsimUnG0065400 Rhododendron simsii HOM05D000222 ORTHO05D000329 3.2e-07 58.2 69 40.6
Atru.chr13.271 Acer truncatum HOM05D000222 ORTHO05D000329 4.1e-07 57.8 36 69.4
Actinidia15430 Actinidia chinensis HOM05D000222 ORTHO05D000329 4.1e-07 57.8 36 69.4
BcaC07g38137 Brassica carinata HOM05D000222 ORTHO05D000329 4.1e-07 57.8 34 67.6
CSS0018705 Camellia sinensis var. sinensis HOM05D000222 ORTHO05D000329 4.1e-07 57.8 36 69.4
Cpa.g.sc64.164 Carica papaya HOM05D000222 ORTHO05D000329 4.1e-07 57.8 36 69.4
DCAR_013875 Daucus carota HOM05D000222 ORTHO05D000329 4.1e-07 57.8 36 69.4
Eucgr.H00972 Eucalyptus grandis HOM05D000222 ORTHO05D000329 4.1e-07 57.8 36 69.4
MBI05_g33510_MAGBIO Magnolia biondii HOM05D000222 ORTHO05D000329 4.1e-07 57.8 36 69.4
Potri.005G241100 Populus trichocarpa HOM05D000222 ORTHO05D000329 4.1e-07 57.8 36 69.4
PGR083G1489 Punica granatum HOM05D000222 ORTHO05D000329 4.1e-07 57.8 36 69.4
Sabra05G0186600 Salix brachista HOM05D000222 ORTHO05D000329 4.1e-07 57.8 36 69.4
SHI36765 Sapria himalayana HOM05D000222 ORTHO05D000329 4.1e-07 57.8 32 81.2
Hund05159 Selenicereus undatus HOM05D000222 ORTHO05D000329 4.1e-07 57.8 36 69.4
TAR536G0015 Trochodendron aralioides HOM05D000222 ORTHO05D000329 4.1e-07 57.8 36 69.4
Aa31sc288G10 Aethionema arabicum HOM05D000222 ORTHO05D000329 5.4e-07 57.4 36 69.4
Medtr1g025430 Medicago truncatula HOM05D000222 ORTHO05D000329 5.4e-07 57.4 36 66.7
Nn5g30723 Nelumbo nucifera HOM05D000222 ORTHO05D000329 5.4e-07 57.4 36 69.4
Nn6g32037 Nelumbo nucifera HOM05D000222 ORTHO05D000329 5.4e-07 57.4 36 69.4
SHI30009 Sapria himalayana HOM05D000222 ORTHO05D000329 5.4e-07 57.4 32 81.2
vmacro04362 Vaccinium macrocarpon HOM05D000222 ORTHO05D000329 5.4e-07 57.4 36 66.7
Aqoxy152s001 Aquilegia oxysepala HOM05D000222 ORTHO05D000329 7.0e-07 57.0 36 69.4
Aqoxy1G02465 Aquilegia oxysepala HOM05D000222 ORTHO05D000329 7.0e-07 57.0 36 69.4
Aqoxy6G02232 Aquilegia oxysepala HOM05D000222 ORTHO05D000329 7.0e-07 57.0 36 69.4
Dinv31859 Davidia involucrata HOM05D000222 ORTHO05D000329 7.0e-07 57.0 36 66.7
HanXRQChr12g0366871 Helianthus annuus HOM05D000222 ORTHO05D000329 7.0e-07 57.0 36 72.2
TPR.G26394 Trifolium pratense HOM05D000222 ORTHO05D000329 7.0e-07 57.0 36 66.7
TAR628G0053 Trochodendron aralioides HOM05D000222 ORTHO05D000329 7.0e-07 57.0 36 69.4
GSVIVG01009931001 Vitis vinifera HOM05D000222 ORTHO05D000329 7.0e-07 57.0 36 69.4
Cfa013966 Carpinus fangiana HOM05D000222 ORTHO05D000329 9.2e-07 56.6 36 66.7
Haze_22648 Corylus avellana HOM05D000222 ORTHO05D000329 9.2e-07 56.6 36 66.7
SHI39797 Sapria himalayana HOM05D010388 ORTHO05D011388 9.2e-07 56.6 29 86.2
SHI40500 Sapria himalayana HOM05D000222 ORTHO05D000329 1.2e-06 56.2 28 89.3
SHI45771 Sapria himalayana HOM05D000222 ORTHO05D000329 1.2e-06 56.2 30 83.3
CiPaw.08G067100 Carya illinoinensis HOM05D000222 ORTHO05D000329 1.6e-06 55.8 36 66.7
Dinv39529 Davidia involucrata HOM05D000222 ORTHO05D000329 1.6e-06 55.8 36 63.9
TAR381G1457 Trochodendron aralioides HOM05D000222 ORTHO05D000329 1.6e-06 55.8 36 63.9
SHI36277 Sapria himalayana HOM05D000222 ORTHO05D000329 2.7e-06 55.1 32 78.1
SHI39034 Sapria himalayana HOM05D000222 ORTHO05D000329 3.5e-06 54.7 36 69.4
SHI49884 Sapria himalayana HOM05D000222 ORTHO05D000329 3.5e-06 54.7 36 69.4
ECA233G5047 Erigeron canadensis HOM05D000222 ORTHO05D000329 4.6e-06 54.3 36 66.7
HanXRQChr13g0387091 Helianthus annuus HOM05D000222 ORTHO05D000329 4.6e-06 54.3 36 66.7
Lsat_1_v5_gn_8_30781 Lactuca sativa HOM05D000222 ORTHO05D000329 6.0e-06 53.9 36 63.9
SHI36780 Sapria himalayana HOM05D000222 ORTHO05D000329 6.0e-06 53.9 36 69.4
SHI38128 Sapria himalayana HOM05D000222 ORTHO05D000329 6.0e-06 53.9 36 69.4
SHI44100 Sapria himalayana HOM05D000222 ORTHO05D000329 6.0e-06 53.9 36 69.4
SHI38625 Sapria himalayana HOM05D000222 ORTHO05D000329 7.8e-06 53.5 30 80.0


User provided reference genes

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