Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI41186 Sapria himalayana HOM05D009561 ORTHO05D003092 1.0e-57 226.5 110 100.0
SHI41184 Sapria himalayana HOM05D009561 ORTHO05D003092 1.2e-23 113.2 63 87.3
SHI33553 Sapria himalayana HOM05D014003 ORTHO05D016381 2.1e-18 95.9 86 60.5
SHI16426 Sapria himalayana HOM05D003107 ORTHO05D003092 4.7e-15 84.7 99 53.5
SHI34339 Sapria himalayana HOM05D014003 ORTHO05D016381 4.4e-13 78.2 105 45.7
QL02p089967 Quercus lobata HOM05D003107 ORTHO05D003092 1.3e-12 76.6 85 50.6
SHI25697 Sapria himalayana HOM05D009561 ORTHO05D003092 1.7e-12 76.3 51 72.5
Potri.018G125500 Populus trichocarpa HOM05D003107 ORTHO05D003092 2.2e-12 75.9 60 65.0
Potri.T125307 Populus trichocarpa HOM05D003107 ORTHO05D003092 2.2e-12 75.9 60 65.0
Manes.06G046500 Manihot esculenta HOM05D003107 ORTHO05D003092 3.8e-12 75.1 60 63.3
Sabra18G0106800 Salix brachista HOM05D003107 ORTHO05D003092 3.8e-12 75.1 54 68.5
Dinv41472 Davidia involucrata HOM05D003107 ORTHO05D003092 8.4e-12 73.9 53 69.8
CiPaw.03G248900 Carya illinoinensis HOM05D003107 ORTHO05D003092 1.1e-11 73.6 60 65.0
ECA234G1222 Erigeron canadensis HOM05D003107 ORTHO05D003092 1.1e-11 73.6 61 59.0
Thecc.09G133300 Theobroma cacao HOM05D003107 ORTHO05D003092 1.1e-11 73.6 54 66.7
Duzib187G1951 Durio zibethinus HOM05D003107 ORTHO05D003092 1.4e-11 73.2 54 66.7
Cfa002924 Carpinus fangiana HOM05D003107 ORTHO05D003092 1.9e-11 72.8 60 63.3
Haze_25496 Corylus avellana HOM05D009561 ORTHO05D003092 1.9e-11 72.8 60 63.3
Aqoxy7G03629 Aquilegia oxysepala HOM05D003107 ORTHO05D003092 2.4e-11 72.4 54 64.8
TAR636G3294 Trochodendron aralioides HOM05D003107 ORTHO05D003092 2.4e-11 72.4 54 66.7
CSS0015137 Camellia sinensis var. sinensis HOM05D009561 ORTHO05D003092 4.2e-11 71.6 60 61.7
CSS0017448 Camellia sinensis var. sinensis HOM05D009561 ORTHO05D003092 4.2e-11 71.6 60 61.7
Gohir.A06G053600 Gossypium hirsutum HOM05D003107 ORTHO05D003092 5.4e-11 71.2 54 64.8
Gohir.D06G052900 Gossypium hirsutum HOM05D003107 ORTHO05D003092 5.4e-11 71.2 54 64.8
Gorai.010G061400 Gossypium raimondii HOM05D003107 ORTHO05D003092 5.4e-11 71.2 54 64.8
Lsat_1_v5_gn_5_93901 Lactuca sativa HOM05D003107 ORTHO05D003092 5.4e-11 71.2 59 57.6
HanXRQChr12g0356791 Helianthus annuus HOM05D003107 ORTHO05D003092 1.6e-10 69.7 61 55.7
Cpa.g.sc46.47 Carica papaya HOM05D003107 ORTHO05D003092 2.1e-10 69.3 60 58.3
Nn8g39562 Nelumbo nucifera HOM05D003107 ORTHO05D003092 2.7e-10 68.9 54 64.8
Actinidia07321 Actinidia chinensis HOM05D003107 ORTHO05D003092 3.5e-10 68.6 61 57.4
Hma1.2p1_0497F.1_g166410 Hydrangea macrophylla HOM05D003107 ORTHO05D003092 6.0e-10 67.8 60 58.3
vmacro07728 Vaccinium macrocarpon HOM05D003107 ORTHO05D003092 7.8e-10 67.4 61 54.1
GSVIVG01015600001 Vitis vinifera HOM05D009561 ORTHO05D003092 1.0e-09 67.0 60 60.0
Nitab4.5_0000374g0120 Nicotiana tabacum HOM05D009561 ORTHO05D003092 1.3e-09 66.6 47 68.1
Nitab4.5_0003393g0030 Nicotiana tabacum HOM05D009561 ORTHO05D003092 1.3e-09 66.6 47 68.1
Peaxi162Scf00088g01215 Petunia axillaris HOM05D009561 ORTHO05D003092 3.9e-09 65.1 47 66.0
Rhsim01G0061100 Rhododendron simsii HOM05D003107 ORTHO05D003092 5.1e-09 64.7 61 52.5
Oeu052756.1 Olea europaea HOM05D009561 ORTHO05D003092 6.6e-09 64.3 52 55.8
AUR62011180 Chenopodium quinoa HOM05D003107 ORTHO05D003092 8.7e-09 63.9 54 55.6
AUR62013303 Chenopodium quinoa HOM05D003107 ORTHO05D003092 8.7e-09 63.9 54 55.6
ATR0800G121 Amborella trichopoda HOM05D003107 ORTHO05D003092 1.5e-08 63.2 50 52.0
CAN.G763.8 Capsicum annuum HOM05D009561 ORTHO05D003092 1.5e-08 63.2 47 63.8
HPP92_010519 Vanilla planifolia HOM05D003107 ORTHO05D003092 1.5e-08 63.2 55 54.5
Sc18g0000310 Simmondsia chinensis HOM05D003107 ORTHO05D003092 7.3e-08 60.8 47 61.7
Ah.09g224690 Amaranthus hybridus HOM05D009561 ORTHO05D003092 9.6e-08 60.5 48 56.2
ATR0772G192 Amborella trichopoda HOM05D009561 ORTHO05D003092 9.6e-08 60.5 50 50.0
Ciclev10007677m.g Citrus clementina HOM05D003107 ORTHO05D003092 1.3e-07 60.1 54 57.4
Lalb_Chr08g0234601 Lupinus albus HOM05D003107 ORTHO05D003092 1.6e-07 59.7 53 58.5
CDE04G1135 Ceratophyllum demersum HOM05D003107 ORTHO05D003092 8.1e-07 57.4 48 58.3
Lj6g0021163 Lotus japonicus HOM05D003107 ORTHO05D003092 5.3e-06 54.7 53 50.9


User provided reference genes

Program Settings