Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI40903 Sapria himalayana HOM05D001560 ORTHO05D003613 4.9e-108 394.4 193 100.0
SHI36624 Sapria himalayana HOM05D001560 ORTHO05D003613 4.9e-92 341.3 183 88.5
SHI35978 Sapria himalayana HOM05D000743 ORTHO05D000580 9.7e-80 300.4 276 59.1
SHI36585 Sapria himalayana HOM05D001560 ORTHO05D003613 2.8e-79 298.9 213 74.2
SHI37166 Sapria himalayana HOM05D001560 ORTHO05D003613 3.7e-71 271.9 144 91.0
SHI36137 Sapria himalayana HOM05D000743 ORTHO05D000580 2.4e-70 269.2 309 50.5
SHI39078 Sapria himalayana HOM05D001560 ORTHO05D003613 7.2e-67 257.7 145 85.5
SHI35235 Sapria himalayana HOM05D001560 ORTHO05D003613 9.7e-64 247.3 194 66.5
SHI44330 Sapria himalayana HOM05D001560 ORTHO05D003613 6.3e-63 244.6 133 87.2
Actinidia34853 Actinidia chinensis HOM05D001560 ORTHO05D003613 2.4e-62 242.7 222 60.8
SHI37087 Sapria himalayana HOM05D001560 ORTHO05D003613 1.5e-61 240.0 235 57.0
SHI37900 Sapria himalayana HOM05D001560 ORTHO05D003613 2.0e-61 239.6 287 49.1
SHI50746 Sapria himalayana HOM05D001560 ORTHO05D003613 1.3e-60 236.9 252 53.6
SHI45575 Sapria himalayana HOM05D001560 ORTHO05D003613 2.2e-60 236.1 252 53.6
SHI36372 Sapria himalayana HOM05D001560 ORTHO05D003613 2.5e-59 232.6 249 53.0
Oeu051780.2 Olea europaea HOM05D001560 ORTHO05D003613 2.7e-58 229.2 279 49.5
SHI34615 Sapria himalayana HOM05D000743 ORTHO05D000580 8.0e-58 227.6 240 52.9
SHI38561 Sapria himalayana HOM05D001560 ORTHO05D003613 9.7e-56 220.7 263 48.7
SHI38584 Sapria himalayana HOM05D001560 ORTHO05D003613 9.7e-56 220.7 263 48.7
SHI37136 Sapria himalayana HOM05D001560 ORTHO05D003613 2.2e-55 219.5 277 47.3
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 8.2e-55 217.6 277 46.9
SHI36381 Sapria himalayana HOM05D001560 ORTHO05D003613 7.7e-53 211.1 115 90.4
RhsimMtG0005500 Rhododendron simsii HOM05D001560 ORTHO05D003613 5.5e-51 204.9 115 87.8
SGA_v2.0_scaffold255G45496 Striga asiatica HOM05D001560 ORTHO05D003613 1.2e-50 203.8 115 87.0
AUR62042345 Chenopodium quinoa HOM05D001560 ORTHO05D003613 4.7e-50 201.8 115 86.1
SHI38463 Sapria himalayana HOM05D001560 ORTHO05D003613 6.1e-50 201.4 257 46.7
SHI36973 Sapria himalayana HOM05D001560 ORTHO05D003613 8.0e-50 201.1 101 92.1
Dinv06700 Davidia involucrata HOM05D001560 ORTHO05D003613 2.3e-49 199.5 115 85.2
Ah.01g011700 Amaranthus hybridus HOM05D001560 ORTHO05D003613 3.0e-49 199.1 115 86.1
Ah.10g028460 Amaranthus hybridus HOM05D001560 ORTHO05D003613 3.0e-49 199.1 115 86.1
Lj2C1229T3 Lonicera japonica HOM05D001560 ORTHO05D003613 3.0e-49 199.1 115 85.2
BolSC28t60329H Brassica oleracea HOM05D001560 ORTHO05D003613 4.0e-49 198.7 115 84.3
BolSC28t60433H Brassica oleracea HOM05D001560 ORTHO05D003613 4.0e-49 198.7 115 84.3
BraSC77t46636Z Brassica rapa HOM05D001560 ORTHO05D003613 4.0e-49 198.7 115 84.3
BraSC77t46661Z Brassica rapa HOM05D001560 ORTHO05D003613 4.0e-49 198.7 115 84.3
Hma1.2p1_0079F.1_g041900 Hydrangea macrophylla HOM05D001560 ORTHO05D003613 4.0e-49 198.7 115 85.2
CANSAT16G0039 Cannabis sativa HOM05D001560 ORTHO05D003613 5.2e-49 198.4 115 86.1
PGR028G0023 Punica granatum HOM05D001560 ORTHO05D003613 8.8e-49 197.6 115 84.3
PGR071G0003 Punica granatum HOM05D001560 ORTHO05D003613 8.8e-49 197.6 115 84.3
Hund12883 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.5e-48 196.8 115 84.3
Hund12886 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.5e-48 196.8 115 85.2
Hund27586 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.5e-48 196.8 115 85.2
Hund27816 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.5e-48 196.8 115 85.2
Hund27900 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.5e-48 196.8 115 85.2
Hund28069 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.5e-48 196.8 115 85.2
Hund28082 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.5e-48 196.8 115 85.2
Hund28866 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.5e-48 196.8 115 85.2
Hund28883 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.5e-48 196.8 115 85.2
Hund29205 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.5e-48 196.8 115 85.2
Hund29341 Selenicereus undatus HOM05D001560 ORTHO05D003613 1.5e-48 196.8 115 85.2
Nn1g10043 Nelumbo nucifera HOM05D001560 ORTHO05D003613 2.6e-48 196.1 115 83.5
Nn4g26009 Nelumbo nucifera HOM05D001560 ORTHO05D003613 2.6e-48 196.1 115 83.5
SHI37854 Sapria himalayana HOM05D001560 ORTHO05D003613 2.6e-48 196.1 115 84.3
AL3G44410 Arabidopsis lyrata HOM05D001560 ORTHO05D003613 3.4e-48 195.7 115 83.5
ATMG00520 Arabidopsis thaliana HOM05D001560 ORTHO05D003613 3.4e-48 195.7 115 83.5
DCAR_032442 Daucus carota HOM05D001560 ORTHO05D003613 3.4e-48 195.7 115 84.3
Sp3g25920 Schrenkiella parvula HOM05D001560 ORTHO05D003613 3.4e-48 195.7 115 83.5
SHI35452 Sapria himalayana HOM05D001560 ORTHO05D003613 4.4e-48 195.3 129 77.5
unitig_87.g27957 Utricularia gibba HOM05D001560 ORTHO05D003613 4.4e-48 195.3 115 84.3
CARHR282880 Cardamine hirsuta HOM05D001560 ORTHO05D003613 9.7e-48 194.1 111 85.6
HanXRQMTg0579631 Helianthus annuus HOM05D001560 ORTHO05D003613 1.3e-47 193.7 115 83.5
SHI35454 Sapria himalayana HOM05D000743 ORTHO05D000580 1.3e-47 193.7 106 84.9
FvH4_2g28480 Fragaria vesca HOM05D001560 ORTHO05D003613 1.7e-47 193.4 115 83.5
ClCG10G004690 Citrullus lanatus HOM05D001560 ORTHO05D003613 2.2e-47 193.0 112 87.5
ClCG10G004710 Citrullus lanatus HOM05D001560 ORTHO05D003613 2.2e-47 193.0 112 87.5
SHI40317 Sapria himalayana HOM05D001560 ORTHO05D003613 2.8e-47 192.6 245 50.2
SabraMtG0009600 Salix brachista HOM05D001560 ORTHO05D003613 1.4e-46 190.3 114 84.2
SHI37161 Sapria himalayana HOM05D000743 ORTHO05D000580 1.8e-46 189.9 133 72.2
COL.COLO4_04089 Corchorus olitorius HOM05D001560 ORTHO05D003613 2.4e-46 189.5 115 83.5
Ca_22176_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 4.1e-46 188.7 115 83.5
LjContig00315g0001212 Lotus japonicus HOM05D001560 ORTHO05D003613 4.1e-46 188.7 115 83.5
TPR.G39706 Trifolium pratense HOM05D001560 ORTHO05D003613 4.1e-46 188.7 115 83.5
Sed0013276 Sechium edule HOM05D001560 ORTHO05D003613 9.1e-46 187.6 112 86.6
SHI35186 Sapria himalayana HOM05D000743 ORTHO05D000580 1.6e-45 186.8 259 44.0
HanXRQChr08g0236201 Helianthus annuus HOM05D001560 ORTHO05D003613 2.7e-45 186.0 115 80.9
HanXRQChr10g0297191 Helianthus annuus HOM05D001560 ORTHO05D003613 5.9e-45 184.9 111 82.9
arahy.Tifrunner.gnm1.ann1.7G246T Arachis hypogaea HOM05D001560 ORTHO05D003613 1.3e-44 183.7 107 85.0
arahy.Tifrunner.gnm1.ann1.JTWL6Q Arachis hypogaea HOM05D001560 ORTHO05D003613 1.3e-44 183.7 107 85.0
Lalb_Chr00c21g0406061 Lupinus albus HOM05D001560 ORTHO05D003613 5.0e-44 181.8 115 81.7
Lalb_Chr00c39g0409051 Lupinus albus HOM05D001560 ORTHO05D003613 5.0e-44 181.8 115 81.7
Lalb_Chr00c39g0409231 Lupinus albus HOM05D001560 ORTHO05D003613 5.0e-44 181.8 115 81.7
Lalb_Chr00c51g0413141 Lupinus albus HOM05D001560 ORTHO05D003613 5.0e-44 181.8 115 81.7
CDE02G0303 Ceratophyllum demersum HOM05D001560 ORTHO05D003613 2.5e-43 179.5 115 77.4
GSVIVG01031611001 Vitis vinifera HOM05D001560 ORTHO05D003613 1.8e-41 173.3 116 72.4
Nn4g26006 Nelumbo nucifera HOM05D001560 ORTHO05D003613 6.8e-41 171.4 99 84.8
SHI34605 Sapria himalayana HOM05D001560 ORTHO05D003613 2.2e-39 166.4 237 41.8
CAN.G1180.6 Capsicum annuum HOM05D001560 ORTHO05D003613 5.9e-37 158.3 93 86.0
SHI50439 Sapria himalayana HOM05D001560 ORTHO05D010994 1.5e-35 153.7 151 57.0
SHI15040 Sapria himalayana HOM05D000743 ORTHO05D003613 1.6e-34 150.2 135 58.5
SHI35327 Sapria himalayana HOM05D001560 ORTHO05D003613 2.8e-34 149.4 228 40.8
Ah.01g011760 Amaranthus hybridus HOM05D001560 ORTHO05D003613 3.6e-34 149.1 88 86.4
SHI34995 Sapria himalayana HOM05D001560 ORTHO05D010994 1.4e-33 147.1 85 85.9
SHI43894 Sapria himalayana HOM05D001560 ORTHO05D003613 1.4e-33 147.1 82 81.7
SHI35290 Sapria himalayana HOM05D000743 ORTHO05D000580 8.9e-33 144.4 202 43.1
SHI43452 Sapria himalayana HOM05D001560 ORTHO05D003613 2.6e-32 142.9 160 50.0
SHI36937 Sapria himalayana HOM05D008793 ORTHO05D012151 5.7e-32 141.7 82 84.1
Nitab4.5_0000307g0340 Nicotiana tabacum HOM05D001560 ORTHO05D003613 2.2e-31 139.8 115 63.5
SHI44984 Sapria himalayana HOM05D001560 ORTHO05D003613 2.8e-31 139.4 72 90.3
SHI38215 Sapria himalayana HOM05D000743 ORTHO05D000580 3.7e-31 139.0 73 86.3
SHI37067 Sapria himalayana HOM05D001560 ORTHO05D010994 4.9e-31 138.7 194 42.8
Lsat_1_v5_gn_5_16600 Lactuca sativa HOM05D001560 ORTHO05D003613 3.2e-30 136.0 115 63.5
SHI39121 Sapria himalayana HOM05D000743 ORTHO05D000580 3.2e-30 136.0 73 86.3
ECA246G4254 Erigeron canadensis HOM05D001560 ORTHO05D003613 5.4e-30 135.2 89 78.7
SHI36270 Sapria himalayana HOM05D001560 ORTHO05D003613 9.2e-30 134.4 69 94.2
Nitab4.5_0000886g0180 Nicotiana tabacum HOM05D001560 ORTHO05D003613 1.0e-28 131.0 115 61.7
Oeu031732.1 Olea europaea HOM05D001560 ORTHO05D003613 5.0e-28 128.6 83 78.3
SHI36773 Sapria himalayana HOM05D001560 ORTHO05D010994 1.2e-26 124.0 150 50.0
SHI36784 Sapria himalayana HOM05D001560 ORTHO05D010994 1.2e-26 124.0 150 50.0
SHI38100 Sapria himalayana HOM05D008793 ORTHO05D012151 8.9e-25 117.9 64 82.8
SHI34998 Sapria himalayana HOM05D001560 ORTHO05D003613 9.2e-22 107.8 65 76.9
SEGI_16710 Sequoiadendron giganteum HOM05D001560 ORTHO05D003613 5.2e-17 92.0 204 36.3
CsaV3_1G026590 Cucumis sativus L. HOM05D001560 ORTHO05D003613 8.9e-17 91.3 60 78.3
CsaV3_UNG210430 Cucumis sativus L. HOM05D001560 ORTHO05D003613 8.9e-17 91.3 60 78.3
Solyc09g056080.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 8.9e-17 91.3 59 78.0
TPR.G13006 Trifolium pratense HOM05D000569 ORTHO05D000418 1.2e-16 90.9 53 83.0
SHI46362 Sapria himalayana HOM05D008793 ORTHO05D012151 2.0e-16 90.1 44 88.6
Solyc11g030880.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 9.8e-16 87.8 111 48.6
Nitab4.5_0002739g0100 Nicotiana tabacum HOM05D001560 ORTHO05D003613 1.3e-15 87.4 54 77.8
SHI49909 Sapria himalayana HOM05D008793 ORTHO05D012151 2.9e-15 86.3 43 86.0
Solyc09g057830.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 3.7e-15 85.9 63 66.7
Peaxi162Scf00348g00515 Petunia axillaris HOM05D001560 ORTHO05D003613 1.9e-14 83.6 54 75.9
Lalb_Chr00c21g0406041 Lupinus albus HOM05D008793 ORTHO05D012151 4.1e-14 82.4 47 80.9
Lalb_Chr00c39g0409041 Lupinus albus HOM05D008793 ORTHO05D012151 4.1e-14 82.4 47 80.9
Lalb_Chr00c39g0409221 Lupinus albus HOM05D008793 ORTHO05D012151 4.1e-14 82.4 47 80.9
Lalb_Chr00c51g0413131 Lupinus albus HOM05D008793 ORTHO05D012151 4.1e-14 82.4 47 80.9
Potri.007G062322 Populus trichocarpa HOM05D008793 ORTHO05D012151 4.1e-14 82.4 47 80.9
TPR.G33726 Trifolium pratense HOM05D001560 ORTHO05D003613 4.1e-14 82.4 65 64.6
RcHm_v2.0_Chr1g0312971 Rosa chinensis HOM05D008793 ORTHO05D012151 5.4e-14 82.0 48 79.2
SHI44092 Sapria himalayana HOM05D001560 ORTHO05D010994 9.2e-14 81.3 40 87.5
Aa31csc1081G10 Aethionema arabicum HOM05D008793 ORTHO05D012151 1.2e-13 80.9 47 78.7
BolSC28t60404H Brassica oleracea HOM05D008793 ORTHO05D012151 1.2e-13 80.9 47 78.7
BraSC77t46637Z Brassica rapa HOM05D008793 ORTHO05D014415 1.2e-13 80.9 47 78.7
Ca_14832_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 1.2e-13 80.9 50 84.0
Ca_22164_v3 Cicer arietinum L. HOM05D001560 ORTHO05D010874 1.2e-13 80.9 50 84.0
Lsat_1_v5_gn_5_16580 Lactuca sativa HOM05D008793 ORTHO05D012151 2.7e-13 79.7 47 78.7
SHI37011 Sapria himalayana HOM05D000743 ORTHO05D000580 6.0e-13 78.6 38 89.5
SHI46273 Sapria himalayana HOM05D008793 ORTHO05D012151 6.0e-13 78.6 38 89.5
Solyc00g500351.1 Solanum lycopersicum HOM05D002965 ORTHO05D011254 7.8e-13 78.2 90 48.9
Nitab4.5_0012260g0050 Nicotiana tabacum HOM05D008793 ORTHO05D010994 1.0e-12 77.8 47 78.7
SHI43389 Sapria himalayana HOM05D000743 ORTHO05D000580 3.0e-12 76.3 84 46.4
Nitab4.5_0000886g0220 Nicotiana tabacum HOM05D008793 ORTHO05D010994 8.6e-12 74.7 58 65.5
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 1.1e-11 74.3 38 84.2
Nitab4.5_0000307g0310 Nicotiana tabacum HOM05D011634 ORTHO05D012151 4.3e-11 72.4 54 68.5
Medtr4g057110 Medicago truncatula HOM05D001560 ORTHO05D003613 1.2e-10 70.9 53 73.6
Solyc09g056310.1 Solanum lycopersicum HOM05D001560 ORTHO05D003613 4.7e-10 68.9 66 59.1
MBI11_g09046_MAGBIO Magnolia biondii HOM05D008793 ORTHO05D012151 1.8e-09 67.0 47 70.2
SHI38843 Sapria himalayana HOM05D001560 ORTHO05D003613 1.8e-09 67.0 34 82.4
Peaxi162Scf00122g00065 Petunia axillaris HOM05D001560 ORTHO05D003613 3.1e-09 66.2 53 64.2
SHI33106 Sapria himalayana HOM05D000743 ORTHO05D000580 5.2e-09 65.5 74 51.4
SHI36018 Sapria himalayana HOM05D000743 ORTHO05D000580 5.2e-09 65.5 38 78.9
Nitab4.5_0000844g0250 Nicotiana tabacum HOM05D001560 ORTHO05D003613 6.8e-09 65.1 36 77.8
SHI39990 Sapria himalayana HOM05D001560 ORTHO05D010994 6.8e-09 65.1 32 81.2
Sopen06g007640 Solanum pennellii HOM05D002965 ORTHO05D012151 6.8e-09 65.1 50 68.0
SHI27345 Sapria himalayana HOM05D001560 ORTHO05D003613 1.2e-08 64.3 32 81.2
Nitab4.5_0001152g1040 Nicotiana tabacum HOM05D001560 ORTHO05D003613 1.5e-08 63.9 35 82.9
Nitab4.5_0008337g0090 Nicotiana tabacum HOM05D001560 ORTHO05D003613 2.0e-08 63.5 36 77.8
Nitab4.5_0000280g0180 Nicotiana tabacum HOM05D008793 ORTHO05D012151 2.6e-08 63.2 46 67.4
SHI39754 Sapria himalayana HOM05D001560 ORTHO05D012151 3.4e-08 62.8 34 79.4
SHI36572 Sapria himalayana HOM05D001560 ORTHO05D010994 4.4e-08 62.4 34 79.4
Pp3c15_3410 Physcomitrium patens HOM05D003614 ORTHO05D004156 7.6e-08 61.6 99 30.3
Nitab4.5_0001506g0030 Nicotiana tabacum HOM05D008793 ORTHO05D013999 1.3e-07 60.8 37 78.4
unitig_87.g27958 Utricularia gibba HOM05D008793 ORTHO05D012151 1.1e-06 57.8 35 77.1
Manes.09G100100 Manihot esculenta HOM05D003614 ORTHO05D004156 1.4e-06 57.4 188 25.0
AagrBONN_evm.TU.Sc2ySwM_366.1 Anthoceros agrestis HOM05D033855 ORTHO05D031241 2.4e-06 56.6 112 29.5
Nitab4.5_0000172g0590 Nicotiana tabacum HOM05D008793 ORTHO05D012151 9.2e-06 54.7 32 78.1


User provided reference genes

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