Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI40902 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-38 162.5 74 100.0
SHI39123 Sapria himalayana HOM05D001560 ORTHO05D004675 6.6e-37 156.8 74 94.6
SHI45393 Sapria himalayana HOM05D001560 ORTHO05D004675 1.5e-36 155.6 74 94.6
SHI36380 Sapria himalayana HOM05D001560 ORTHO05D004675 2.5e-36 154.8 74 94.6
SHI35320 Sapria himalayana HOM05D001560 ORTHO05D004675 3.3e-36 154.5 74 93.2
SHI36583 Sapria himalayana HOM05D001560 ORTHO05D004675 5.6e-36 153.7 74 93.2
SHI38033 Sapria himalayana HOM05D001560 ORTHO05D004675 1.2e-35 152.5 74 93.2
SHI54579 Sapria himalayana HOM05D001560 ORTHO05D004675 1.6e-35 152.1 74 94.6
SHI48979 Sapria himalayana HOM05D001560 ORTHO05D004675 8.1e-35 149.8 71 93.0
SHI42286 Sapria himalayana HOM05D000743 ORTHO05D004675 1.1e-34 149.4 74 93.2
SHI51143 Sapria himalayana HOM05D001560 ORTHO05D004675 1.1e-34 149.4 74 93.2
SHI36081 Sapria himalayana HOM05D001560 ORTHO05D004675 1.8e-34 148.7 74 93.2
SHI37161 Sapria himalayana HOM05D000743 ORTHO05D000580 1.8e-34 148.7 74 91.9
SHI43451 Sapria himalayana HOM05D001560 ORTHO05D004675 3.1e-34 147.9 74 90.5
SHI33931 Sapria himalayana HOM05D001560 ORTHO05D004675 5.2e-34 147.1 71 94.4
SHI36375 Sapria himalayana HOM05D001560 ORTHO05D004675 5.2e-34 147.1 74 91.9
SHI49196 Sapria himalayana HOM05D001560 ORTHO05D004675 5.2e-34 147.1 71 94.4
SHI36939 Sapria himalayana HOM05D001560 ORTHO05D004675 6.8e-34 146.7 72 93.1
SHI36775 Sapria himalayana HOM05D001560 ORTHO05D004675 8.9e-34 146.4 74 90.5
SHI36786 Sapria himalayana HOM05D001560 ORTHO05D004675 8.9e-34 146.4 74 90.5
Aa31csc239G40 Aethionema arabicum HOM05D001560 ORTHO05D004675 7.6e-33 143.3 74 89.2
BcaC09g49590 Brassica carinata HOM05D001560 ORTHO05D004675 7.6e-33 143.3 74 89.2
BolSC28t60362H Brassica oleracea HOM05D001560 ORTHO05D004675 7.6e-33 143.3 74 89.2
BraSC48t46349Z Brassica rapa HOM05D001560 ORTHO05D004675 7.6e-33 143.3 74 89.2
CARHR287160 Cardamine hirsuta HOM05D001560 ORTHO05D004675 7.6e-33 143.3 74 89.2
Migut.D01524 Erythranthe guttata HOM05D001560 ORTHO05D004675 7.6e-33 143.3 74 89.2
Thhalv10022839m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 7.6e-33 143.3 74 89.2
SHI27346 Sapria himalayana HOM05D001560 ORTHO05D004675 7.6e-33 143.3 71 91.5
Sp3g25870 Schrenkiella parvula HOM05D001560 ORTHO05D004675 7.6e-33 143.3 74 89.2
Potri.013G066660 Populus trichocarpa HOM05D001560 ORTHO05D004675 9.9e-33 142.9 74 87.8
ECA039G0015 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.3e-32 142.5 74 89.2
ECA039G0026 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.3e-32 142.5 74 89.2
ECA041G0003 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.3e-32 142.5 74 89.2
ECA238G3729 Erigeron canadensis HOM05D001560 ORTHO05D004675 1.3e-32 142.5 74 89.2
HanXRQChr02g0035261 Helianthus annuus HOM05D001560 ORTHO05D004675 1.3e-32 142.5 74 89.2
SHI34631 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-32 142.5 74 89.2
SHI53856 Sapria himalayana HOM05D001560 ORTHO05D004675 1.3e-32 142.5 74 90.5
ATMG00070 Arabidopsis thaliana HOM05D001560 ORTHO05D004675 1.7e-32 142.1 74 87.8
CARHR282620 Cardamine hirsuta HOM05D001560 ORTHO05D004675 1.7e-32 142.1 74 87.8
SHI36971 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-32 141.7 74 87.8
SHI37164 Sapria himalayana HOM05D001560 ORTHO05D003613 2.2e-32 141.7 71 90.1
SHI43258 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-32 141.7 74 87.8
SHI47572 Sapria himalayana HOM05D001560 ORTHO05D004675 2.2e-32 141.7 71 90.1
SHI34635 Sapria himalayana HOM05D001560 ORTHO05D004675 2.9e-32 141.4 72 88.9
SHI36016 Sapria himalayana HOM05D001560 ORTHO05D004675 2.9e-32 141.4 74 87.8
SabraMtG0007900 Salix brachista HOM05D001560 ORTHO05D004675 3.8e-32 141.0 74 87.8
SHI35231 Sapria himalayana HOM05D001560 ORTHO05D004675 3.8e-32 141.0 71 90.1
SHI36627 Sapria himalayana HOM05D001560 ORTHO05D004675 4.9e-32 140.6 70 91.4
CAN.G223.15 Capsicum annuum HOM05D001560 ORTHO05D004675 6.4e-32 140.2 74 87.8
CsaV3_UNG210330 Cucumis sativus L. HOM05D001560 ORTHO05D004675 6.4e-32 140.2 74 87.8
Gohir.A01G022400 Gossypium hirsutum HOM05D001560 ORTHO05D004675 6.4e-32 140.2 74 87.8
LjContig00439g0006307 Lotus japonicus HOM05D001560 ORTHO05D004675 6.4e-32 140.2 74 87.8
LjContig00446g0014136 Lotus japonicus HOM05D001560 ORTHO05D004675 6.4e-32 140.2 74 87.8
Lalb_Chr00c21g0406161 Lupinus albus HOM05D001560 ORTHO05D004675 6.4e-32 140.2 74 87.8
Lalb_Chr00c39g0409121 Lupinus albus HOM05D001560 ORTHO05D004675 6.4e-32 140.2 74 87.8
Lalb_Chr00c39g0409261 Lupinus albus HOM05D001560 ORTHO05D004675 6.4e-32 140.2 74 87.8
Lalb_Chr00c51g0413181 Lupinus albus HOM05D001560 ORTHO05D004675 6.4e-32 140.2 74 87.8
Peaxi162Scf01588g00002 Petunia axillaris HOM05D001560 ORTHO05D004675 6.4e-32 140.2 74 87.8
RcHm_v2.0_Chr6g0257991 Rosa chinensis HOM05D001560 ORTHO05D004675 6.4e-32 140.2 74 87.8
RcHm_v2.0_MTg0498881 Rosa chinensis HOM05D001560 ORTHO05D004675 6.4e-32 140.2 74 87.8
SalBow1G1852 Salvia bowleyana HOM05D001560 ORTHO05D004675 6.4e-32 140.2 74 87.8
Solyc00g019950.1 Solanum lycopersicum HOM05D001560 ORTHO05D004675 6.4e-32 140.2 74 87.8
Sopen00g002540 Solanum pennellii HOM05D001560 ORTHO05D004675 6.4e-32 140.2 74 87.8
Actinidia34872 Actinidia chinensis HOM05D001560 ORTHO05D004675 1.1e-31 139.4 74 87.8
C01p34750 Brassica napus HOM05D001560 ORTHO05D004675 1.1e-31 139.4 74 87.8
BolC1t03442H Brassica oleracea HOM05D001560 ORTHO05D004675 1.1e-31 139.4 74 87.8
Dinv29327 Davidia involucrata HOM05D001560 ORTHO05D004675 1.1e-31 139.4 74 87.8
HanXRQChr00c0055g0571471 Helianthus annuus HOM05D001560 ORTHO05D004675 1.1e-31 139.4 74 87.8
HanXRQChr12g0358671 Helianthus annuus HOM05D001560 ORTHO05D004675 1.1e-31 139.4 74 87.8
HanXRQMTg0579651 Helianthus annuus HOM05D001560 ORTHO05D004675 1.1e-31 139.4 74 87.8
Lj2P1224T99 Lonicera japonica HOM05D001560 ORTHO05D004675 1.1e-31 139.4 74 87.8
Lj2P1227T100 Lonicera japonica HOM05D001560 ORTHO05D004675 1.1e-31 139.4 74 87.8
unitig_87.g28016 Utricularia gibba HOM05D001560 ORTHO05D004675 1.1e-31 139.4 74 87.8
arahy.Tifrunner.gnm1.ann1.11DKXG Arachis hypogaea HOM05D001560 ORTHO05D004675 1.4e-31 139.0 74 86.5
arahy.Tifrunner.gnm1.ann1.HAH5KR Arachis hypogaea HOM05D001560 ORTHO05D004675 1.4e-31 139.0 74 86.5
Sed0020323 Sechium edule HOM05D001560 ORTHO05D004675 1.4e-31 139.0 74 86.5
SGA_v2.0_scaffold245G44645 Striga asiatica HOM05D001560 ORTHO05D004675 1.4e-31 139.0 74 86.5
CANSAT16G0009 Cannabis sativa HOM05D001560 ORTHO05D004675 2.4e-31 138.3 74 86.5
CAN.G134.23 Capsicum annuum HOM05D001560 ORTHO05D004675 2.4e-31 138.3 74 86.5
Gohir.A03G134200 Gossypium hirsutum HOM05D001560 ORTHO05D004675 2.4e-31 138.3 74 86.5
RhsimMtG0004600 Rhododendron simsii HOM05D001560 ORTHO05D004675 3.2e-31 137.9 74 86.5
RhsimMtG0006100 Rhododendron simsii HOM05D001560 ORTHO05D004675 3.2e-31 137.9 74 86.5
SHI37085 Sapria himalayana HOM05D001560 ORTHO05D004675 3.2e-31 137.9 68 91.2
SHI38213 Sapria himalayana HOM05D001560 ORTHO05D004675 3.2e-31 137.9 74 87.8
Thhalv10002997m.g Eutrema salsugineum HOM05D001560 ORTHO05D004675 4.2e-31 137.5 74 86.5
Cpa.g.sc38.8 Carica papaya HOM05D001560 ORTHO05D004675 5.4e-31 137.1 74 85.1
DCAR_031657 Daucus carota HOM05D001560 ORTHO05D004675 7.1e-31 136.7 72 87.5
DCAR_032439 Daucus carota HOM05D001560 ORTHO05D004675 7.1e-31 136.7 72 87.5
BcaC09g49591 Brassica carinata HOM05D001560 ORTHO05D004675 9.3e-31 136.3 71 87.3
Zm00001eb382940 Zea mays HOM05D001560 ORTHO05D004675 1.6e-30 135.6 74 85.1
Zm00001eb436070 Zea mays HOM05D001560 ORTHO05D004675 1.6e-30 135.6 74 85.1
Zm00001eb440310 Zea mays HOM05D001560 ORTHO05D004675 1.6e-30 135.6 74 85.1
Zm00001eb440380 Zea mays HOM05D001560 ORTHO05D004675 1.6e-30 135.6 74 85.1
Zm00001eb442180 Zea mays HOM05D001560 ORTHO05D004675 1.6e-30 135.6 74 85.1
arahy.Tifrunner.gnm1.ann1.E4X7TI Arachis hypogaea HOM05D001560 ORTHO05D004675 2.1e-30 135.2 72 86.1
SHI26652 Sapria himalayana HOM05D001560 ORTHO05D004675 2.1e-30 135.2 69 89.9
MBI05_g23323_MAGBIO Magnolia biondii HOM05D001560 ORTHO05D004675 3.5e-30 134.4 74 85.1
Nn1g10115 Nelumbo nucifera HOM05D001560 ORTHO05D004675 3.5e-30 134.4 74 85.1
SHI36139 Sapria himalayana HOM05D001560 ORTHO05D004675 3.5e-30 134.4 68 91.2
SHI39097 Sapria himalayana HOM05D001560 ORTHO05D004675 3.5e-30 134.4 70 88.6
DCAR_032222 Daucus carota HOM05D001560 ORTHO05D004675 4.6e-30 134.0 72 86.1
CDE02G0735 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 6.0e-30 133.7 72 86.1
CDE02G2746 Ceratophyllum demersum HOM05D001560 ORTHO05D004675 6.0e-30 133.7 72 86.1
Nitab4.5_0013170g0020 Nicotiana tabacum HOM05D001560 ORTHO05D004675 6.0e-30 133.7 72 83.3
BolSC28t60305H Brassica oleracea HOM05D001560 ORTHO05D004675 1.3e-29 132.5 68 88.2
CsaV3_5G015950 Cucumis sativus L. HOM05D001560 ORTHO05D004675 2.3e-29 131.7 74 83.8
Ca_22175_v3 Cicer arietinum L. HOM05D001560 ORTHO05D004675 3.0e-29 131.3 69 87.0
Medtr0212s0080 Medicago truncatula HOM05D001560 ORTHO05D004675 3.0e-29 131.3 69 87.0
Psat7g198960 Pisum sativum HOM05D001560 ORTHO05D004675 3.0e-29 131.3 69 87.0
TPR.G40193 Trifolium pratense HOM05D001560 ORTHO05D004675 3.0e-29 131.3 69 87.0
Dinv06677 Davidia involucrata HOM05D001560 ORTHO05D004675 3.9e-29 131.0 70 85.7
SHI38099 Sapria himalayana HOM05D001560 ORTHO05D004675 5.1e-29 130.6 74 83.8
Ah.02g118870 Amaranthus hybridus HOM05D001560 ORTHO05D004675 6.6e-29 130.2 71 83.1
Ah.08g210720 Amaranthus hybridus HOM05D001560 ORTHO05D004675 6.6e-29 130.2 71 83.1
Ah.10g027950 Amaranthus hybridus HOM05D001560 ORTHO05D004675 6.6e-29 130.2 71 83.1
AUR62042344 Chenopodium quinoa HOM05D001560 ORTHO05D004675 6.6e-29 130.2 71 83.1
SHI37162 Sapria himalayana HOM05D001560 ORTHO05D004675 8.7e-29 129.8 69 87.0
SHI42241 Sapria himalayana HOM05D001560 ORTHO05D004675 1.5e-28 129.0 74 83.8
SHI53284 Sapria himalayana HOM05D001560 ORTHO05D004675 3.3e-28 127.9 72 84.7
PGSC0003DMG400018984 Solanum tuberosum HOM05D001560 ORTHO05D004675 1.3e-27 125.9 74 79.7
Nitab4.5_0001127g0220 Nicotiana tabacum HOM05D001560 ORTHO05D004675 6.2e-27 123.6 74 77.0
Nitab4.5_0001152g0390 Nicotiana tabacum HOM05D001560 ORTHO05D004675 2.6e-25 118.2 67 77.6
Ah.10g028660 Amaranthus hybridus HOM05D001560 ORTHO05D004675 2.9e-24 114.8 63 84.1
Cre07.g327400 Chlamydomonas reinhardtii HOM05D001560 ORTHO05D004675 7.1e-23 110.2 68 72.1
Haze_26224 Corylus avellana HOM05D001560 ORTHO05D004675 9.3e-23 109.8 69 69.6
SHI37068 Sapria himalayana HOM05D001560 ORTHO05D004675 6.0e-22 107.1 68 77.9
HanXRQChr10g0297171 Helianthus annuus HOM05D001560 ORTHO05D004675 1.7e-21 105.5 56 87.5
Manes.01G049495 Manihot esculenta HOM05D001560 ORTHO05D004675 2.3e-21 105.1 59 83.1
Nitab4.5_0000661g0100 Nicotiana tabacum HOM05D001560 ORTHO05D004675 3.3e-20 101.3 57 80.7
SHI35323 Sapria himalayana HOM05D001560 ORTHO05D004675 2.8e-19 98.2 58 81.0
SHI44216 Sapria himalayana HOM05D001560 ORTHO05D004675 1.4e-18 95.9 69 68.1
SHI51556 Sapria himalayana HOM05D001560 ORTHO05D004675 3.1e-18 94.7 45 93.3
SHI52730 Sapria himalayana HOM05D001560 ORTHO05D004675 5.3e-18 94.0 45 91.1
SHI40934 Sapria himalayana HOM05D001560 ORTHO05D004675 2.0e-17 92.0 49 83.7
Gorai.001G166700 Gossypium raimondii HOM05D007877 ORTHO05D009957 9.9e-17 89.7 48 85.4
Lsat_1_v5_gn_1_23980 Lactuca sativa HOM05D001560 ORTHO05D004675 1.7e-16 89.0 57 73.7
SHI46062 Sapria himalayana HOM05D001560 ORTHO05D004675 1.7e-16 89.0 47 85.1
Hma1.2p1_1099F.1_g256790 Hydrangea macrophylla HOM05D001560 ORTHO05D004675 1.1e-15 86.3 48 83.3
CsaV3_5G015880 Cucumis sativus L. HOM05D001560 ORTHO05D004675 5.4e-15 84.0 49 77.6
Nitab4.5_0019346g0010 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.8e-13 79.0 44 81.8
SHI33107 Sapria himalayana HOM05D001560 ORTHO05D004675 8.7e-13 76.6 48 72.9
SHI35188 Sapria himalayana HOM05D001560 ORTHO05D004675 8.7e-13 76.6 35 94.3
SHI50434 Sapria himalayana HOM05D001560 ORTHO05D004675 1.5e-12 75.9 37 89.2
SHI35332 Sapria himalayana HOM05D001560 ORTHO05D004675 5.6e-12 73.9 34 94.1
Nitab4.5_0001152g0580 Nicotiana tabacum HOM05D001560 ORTHO05D004675 3.7e-11 71.2 50 66.0
Os12g0422971 Oryza sativa ssp. japonica HOM05D001560 ORTHO05D004675 3.7e-11 71.2 39 82.1
SHI49835 Sapria himalayana HOM05D001560 ORTHO05D004675 8.1e-11 70.1 35 91.4
SHI50380 Sapria himalayana HOM05D001560 ORTHO05D004675 8.1e-11 70.1 35 91.4
SMO053G0006 Selaginella moellendorffii HOM05D001560 ORTHO05D004675 1.8e-10 68.9 71 46.5
SHI38481 Sapria himalayana HOM05D001560 ORTHO05D004675 6.9e-10 67.0 37 83.8
SHI35288 Sapria himalayana HOM05D001560 ORTHO05D004675 9.0e-10 66.6 34 88.2
SHI35482 Sapria himalayana HOM05D001560 ORTHO05D003613 1.5e-09 65.9 39 79.5
Nitab4.5_0001152g0360 Nicotiana tabacum HOM05D001560 ORTHO05D004675 1.3e-08 62.8 31 87.1
SHI36269 Sapria himalayana HOM05D001560 ORTHO05D004675 8.4e-08 60.1 29 89.7
EL10Ac7g17432 Beta vulgaris HOM05D001560 ORTHO05D004675 7.9e-06 53.5 35 68.6


User provided reference genes

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