Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI37858 Sapria himalayana HOM05D000540 ORTHO05D000681 3.0e-54 214.9 107 100.0
SHI37906 Sapria himalayana HOM05D000540 ORTHO05D000681 3.0e-54 214.9 107 100.0
SHI37965 Sapria himalayana HOM05D000540 ORTHO05D000681 3.0e-54 214.9 107 100.0
SHI38052 Sapria himalayana HOM05D000540 ORTHO05D000681 3.0e-54 214.9 107 100.0
SHI38194 Sapria himalayana HOM05D000540 ORTHO05D000681 3.0e-54 214.9 107 100.0
SHI38471 Sapria himalayana HOM05D000540 ORTHO05D000681 3.0e-54 214.9 107 100.0
SHI38605 Sapria himalayana HOM05D000540 ORTHO05D000681 3.0e-54 214.9 107 100.0
SHI38868 Sapria himalayana HOM05D000540 ORTHO05D000681 3.0e-54 214.9 107 100.0
SHI40550 Sapria himalayana HOM05D000540 ORTHO05D008105 3.0e-54 214.9 107 100.0
SHI37876 Sapria himalayana HOM05D000540 ORTHO05D000681 4.0e-51 204.5 107 97.2
SHI40340 Sapria himalayana HOM05D000540 ORTHO05D000681 1.2e-50 203.0 107 93.5
SHI45733 Sapria himalayana HOM05D000540 ORTHO05D000681 8.3e-49 196.8 143 74.8
SHI31828 Sapria himalayana HOM05D000540 ORTHO05D000681 4.6e-47 191.0 153 69.3
SHI38589 Sapria himalayana HOM05D000540 ORTHO05D000681 4.0e-43 177.9 107 88.8
SHI40568 Sapria himalayana HOM05D000540 ORTHO05D000681 1.6e-39 166.0 106 82.1
SHI34991 Sapria himalayana HOM05D000540 ORTHO05D000681 2.1e-39 165.6 121 74.4
SHI37207 Sapria himalayana HOM05D000540 ORTHO05D008105 1.6e-36 156.0 107 77.6
SHI35858 Sapria himalayana HOM05D000540 ORTHO05D008105 3.1e-35 151.8 150 60.0
SHI41069 Sapria himalayana HOM05D000540 ORTHO05D000681 6.9e-35 150.6 76 98.7
SHI53542 Sapria himalayana HOM05D000540 ORTHO05D000681 6.9e-35 150.6 76 98.7
SHI43265 Sapria himalayana HOM05D000540 ORTHO05D000681 1.2e-34 149.8 75 100.0
SHI43312 Sapria himalayana HOM05D000540 ORTHO05D000681 1.2e-34 149.8 75 100.0
SHI27340 Sapria himalayana HOM05D000540 ORTHO05D000681 5.8e-34 147.5 76 96.1
SHI38513 Sapria himalayana HOM05D000540 ORTHO05D000681 8.4e-33 143.7 103 74.8
SHI50522 Sapria himalayana HOM05D000540 ORTHO05D000681 8.4e-33 143.7 103 74.8
SHI37000 Sapria himalayana HOM05D000540 ORTHO05D000681 1.1e-32 143.3 76 92.1
SHI54100 Sapria himalayana HOM05D000540 ORTHO05D008105 7.1e-32 140.6 75 92.0
SHI40537 Sapria himalayana HOM05D000540 ORTHO05D008105 1.2e-31 139.8 76 92.1
SHI36701 Sapria himalayana HOM05D000540 ORTHO05D008105 2.1e-31 139.0 75 94.7
SHI36893 Sapria himalayana HOM05D000540 ORTHO05D008105 2.7e-31 138.7 76 93.4
SHI35194 Sapria himalayana HOM05D000540 ORTHO05D000681 4.6e-31 137.9 75 93.3
SHI54850 Sapria himalayana HOM05D000540 ORTHO05D008105 6.6e-30 134.0 83 84.3
SHI38050 Sapria himalayana HOM05D000540 ORTHO05D000681 1.1e-29 133.3 103 71.8
SHI38983 Sapria himalayana HOM05D000540 ORTHO05D008105 1.9e-29 132.5 75 93.3
SHI37554 Sapria himalayana HOM05D000540 ORTHO05D008105 3.3e-29 131.7 102 70.6
SHI37890 Sapria himalayana HOM05D000540 ORTHO05D008105 9.0e-27 123.6 107 67.3
SHI50600 Sapria himalayana HOM05D000540 ORTHO05D000681 7.6e-26 120.6 61 96.7
SHI49464 Sapria himalayana HOM05D000540 ORTHO05D000681 6.4e-25 117.5 62 95.2
SHI37326 Sapria himalayana HOM05D000540 ORTHO05D000681 1.4e-24 116.3 63 93.7
SHI47944 Sapria himalayana HOM05D000540 ORTHO05D008105 4.2e-24 114.8 61 95.1
SHI51026 Sapria himalayana HOM05D000540 ORTHO05D000681 5.1e-22 107.8 53 98.1
SHI40214 Sapria himalayana HOM05D000540 ORTHO05D000681 9.6e-21 103.6 58 89.7
SHI51272 Sapria himalayana HOM05D000540 ORTHO05D000681 2.8e-20 102.1 51 98.0
SHI48062 Sapria himalayana HOM05D000540 ORTHO05D000681 1.5e-18 96.3 107 56.1
SHI49875 Sapria himalayana HOM05D000540 ORTHO05D000681 8.4e-17 90.5 46 95.7
SHI53038 Sapria himalayana HOM05D000540 ORTHO05D000681 8.4e-17 90.5 46 95.7
SHI54942 Sapria himalayana HOM05D000540 ORTHO05D008105 4.2e-16 88.2 45 95.6
SHI37868 Sapria himalayana HOM05D000540 ORTHO05D008105 6.0e-15 84.3 41 100.0
SHI41065 Sapria himalayana HOM05D000540 ORTHO05D000681 1.5e-13 79.7 40 97.5
SHI38387 Sapria himalayana HOM05D000540 ORTHO05D000681 1.4e-11 73.2 35 100.0
SHI25681 Sapria himalayana HOM05D000540 ORTHO05D008105 5.3e-11 71.2 55 74.5
SHI44879 Sapria himalayana HOM05D000540 ORTHO05D008105 3.8e-09 65.1 33 93.9
CANSAT16G0016 Cannabis sativa HOM05D000540 ORTHO05D008105 4.9e-09 64.7 45 66.7
Lj2A1229G102 Lonicera japonica HOM05D000540 ORTHO05D000681 1.9e-08 62.8 45 64.4
Nn1g09992 Nelumbo nucifera HOM05D000540 ORTHO05D008105 2.5e-08 62.4 45 64.4
Nn1g10001 Nelumbo nucifera HOM05D000540 ORTHO05D008105 2.5e-08 62.4 45 64.4
Nn1g10092 Nelumbo nucifera HOM05D000540 ORTHO05D008105 2.5e-08 62.4 45 64.4
GSVIVG01038017001 Vitis vinifera HOM05D000540 ORTHO05D008105 5.5e-08 61.2 45 64.4
Solyc00g500245.1 Solanum lycopersicum HOM05D001987 ORTHO05D006514 7.1e-08 60.8 45 62.2
Solyc00g500273.1 Solanum lycopersicum HOM05D000540 ORTHO05D008105 7.1e-08 60.8 45 62.2
Sopen00g002770 Solanum pennellii HOM05D004291 ORTHO05D005620 7.1e-08 60.8 45 62.2
PGSC0003DMG400021035 Solanum tuberosum HOM05D000540 ORTHO05D008105 7.1e-08 60.8 45 62.2
Thecc.02G009100 Theobroma cacao HOM05D000540 ORTHO05D008105 9.3e-08 60.5 45 60.0
Lj3g0015602 Lotus japonicus HOM05D000540 ORTHO05D008105 1.6e-07 59.7 45 57.8
Glyma.08G106800 Glycine max HOM05D000540 ORTHO05D008105 2.1e-07 59.3 45 60.0
Rhsim11G0036800 Rhododendron simsii HOM05D000540 ORTHO05D008105 2.1e-07 59.3 45 64.4
GSVIVG01027360001 Vitis vinifera HOM05D000540 ORTHO05D008105 2.1e-07 59.3 45 62.2
Cfa009693 Carpinus fangiana HOM05D002804 ORTHO05D003755 3.5e-07 58.5 44 54.5
Ciclev10002977m.g Citrus clementina HOM05D000540 ORTHO05D008105 6.0e-07 57.8 45 55.6
Nitab4.5_0009703g0070 Nicotiana tabacum HOM05D000540 ORTHO05D008105 6.0e-07 57.8 45 60.0
arahy.Tifrunner.gnm1.ann1.3CPC1Y Arachis hypogaea HOM05D000540 ORTHO05D008105 7.9e-07 57.4 45 55.6
arahy.Tifrunner.gnm1.ann1.WZXK6X Arachis hypogaea HOM05D000540 ORTHO05D008105 7.9e-07 57.4 45 55.6
Prupe.2G123500 Prunus persica HOM05D000540 ORTHO05D008105 7.9e-07 57.4 45 55.6
Solyc05g045820.1 Solanum lycopersicum HOM05D000540 ORTHO05D008105 7.9e-07 57.4 41 63.4
Eucgr.D00430 Eucalyptus grandis HOM05D000540 ORTHO05D008105 1.3e-06 56.6 35 68.6
Haze_23044 Corylus avellana HOM05D004763 ORTHO05D007492 1.8e-06 56.2 44 54.5
RcHm_v2.0_Chr7g0212161 Rosa chinensis HOM05D000540 ORTHO05D008105 1.8e-06 56.2 45 53.3
FvH4_5g23230 Fragaria vesca HOM05D000540 ORTHO05D008105 2.3e-06 55.8 45 53.3
FAN04G1833 Fragaria x ananassa HOM05D000540 ORTHO05D008105 2.3e-06 55.8 45 53.3
FAN08G1475 Fragaria x ananassa HOM05D000540 ORTHO05D008105 2.3e-06 55.8 45 53.3
FAN18G0695 Fragaria x ananassa HOM05D000540 ORTHO05D008105 2.3e-06 55.8 45 53.3
FAN18G3733 Fragaria x ananassa HOM05D000540 ORTHO05D008105 2.3e-06 55.8 45 53.3
Glyma.05G150000 Glycine max HOM05D000540 ORTHO05D008105 2.3e-06 55.8 45 55.6
Lalb_Chr10g0097221 Lupinus albus HOM05D000540 ORTHO05D008105 2.3e-06 55.8 45 55.6
Nitab4.5_0011987g0020 Nicotiana tabacum HOM05D000540 ORTHO05D008105 2.3e-06 55.8 45 60.0
Phvul.001G167500 Phaseolus vulgaris HOM05D000540 ORTHO05D008105 2.3e-06 55.8 45 55.6
VMungo1383G2423 Vigna mungo HOM05D001610 ORTHO05D001585 2.3e-06 55.8 45 55.6
Ca_09077_v3 Cicer arietinum L. HOM05D000540 ORTHO05D008105 3.0e-06 55.5 45 55.6
Ca_22805_v3 Cicer arietinum L. HOM05D000540 ORTHO05D008105 3.0e-06 55.5 45 55.6
TPR.G25660 Trifolium pratense HOM05D000540 ORTHO05D008105 3.0e-06 55.5 45 55.6
TPR.G34443 Trifolium pratense HOM05D000540 ORTHO05D008105 3.0e-06 55.5 45 55.6
MD02G1217700 Malus domestica HOM05D000540 ORTHO05D008105 3.9e-06 55.1 45 53.3
MD07G1100000 Malus domestica HOM05D000540 ORTHO05D008105 3.9e-06 55.1 45 53.3
BcaB04g20419 Brassica carinata HOM05D000540 ORTHO05D008105 5.1e-06 54.7 45 53.3
BcaB06g26544 Brassica carinata HOM05D000540 ORTHO05D008105 5.1e-06 54.7 45 53.3
BcaC06g35575 Brassica carinata HOM05D000540 ORTHO05D008105 5.1e-06 54.7 45 53.3
A01p31250 Brassica napus HOM05D000540 ORTHO05D008105 5.1e-06 54.7 45 53.3
A03p43380 Brassica napus HOM05D000540 ORTHO05D008105 5.1e-06 54.7 45 53.3
A07p08550 Brassica napus HOM05D000540 ORTHO05D008105 5.1e-06 54.7 45 53.3
C01p39820 Brassica napus HOM05D000540 ORTHO05D008105 5.1e-06 54.7 45 53.3
C07p13360 Brassica napus HOM05D000540 ORTHO05D008105 5.1e-06 54.7 45 53.3
BolC1t03932H Brassica oleracea HOM05D000540 ORTHO05D008105 5.1e-06 54.7 45 53.3
BolC7t41830H Brassica oleracea HOM05D000540 ORTHO05D008105 5.1e-06 54.7 45 53.3
BraA01t03249Z Brassica rapa HOM05D000540 ORTHO05D008105 5.1e-06 54.7 45 53.3
BraA03t13476Z Brassica rapa HOM05D000540 ORTHO05D008105 5.1e-06 54.7 45 53.3
BraA07t28644Z Brassica rapa HOM05D000540 ORTHO05D008105 5.1e-06 54.7 45 53.3
CiPaw.04G013600 Carya illinoinensis HOM05D002804 ORTHO05D003755 5.1e-06 54.7 46 56.5
Thhalv10002665m.g Eutrema salsugineum HOM05D000540 ORTHO05D008105 5.1e-06 54.7 45 53.3
SHI38535 Sapria himalayana HOM05D000540 ORTHO05D008105 5.1e-06 54.7 29 89.7
Sp3g21530 Schrenkiella parvula HOM05D000540 ORTHO05D008105 5.1e-06 54.7 45 53.3
Atru.chr7.1082 Acer truncatum HOM05D000540 ORTHO05D008105 6.7e-06 54.3 35 65.7
AL8G10730 Arabidopsis lyrata HOM05D000540 ORTHO05D008105 6.7e-06 54.3 45 53.3
AT5G47320 Arabidopsis thaliana HOM05D000540 ORTHO05D008105 6.7e-06 54.3 45 53.3
Manes.07G029100 Manihot esculenta HOM05D000540 ORTHO05D008105 6.7e-06 54.3 45 53.3
Medtr7g106780 Medicago truncatula HOM05D000540 ORTHO05D008105 6.7e-06 54.3 45 55.6


User provided reference genes

Program Settings