Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI40238 Sapria himalayana HOM05D010923 ORTHO05D003989 1.2e-61 239.6 118 100.0
SHI36351 Sapria himalayana HOM05D010923 ORTHO05D003989 1.4e-33 146.4 84 84.5
SHI35683 Sapria himalayana HOM05D000558 ORTHO05D001857 4.0e-28 128.3 73 83.6
SHI42924 Sapria himalayana HOM05D010923 ORTHO05D003989 5.2e-28 127.9 86 73.3
SHI23604 Sapria himalayana HOM05D000849 ORTHO05D003989 6.6e-23 110.9 67 79.1
SHI50902 Sapria himalayana HOM05D010923 ORTHO05D003989 5.6e-22 107.8 70 77.1
SHI46441 Sapria himalayana HOM05D010923 ORTHO05D003989 8.1e-21 104.0 81 67.9
SHI37256 Sapria himalayana HOM05D010923 ORTHO05D001219 1.2e-19 100.1 86 61.6
SHI46084 Sapria himalayana HOM05D000849 ORTHO05D003989 3.4e-19 98.6 114 53.5
SHI35822 Sapria himalayana HOM05D010923 ORTHO05D003989 2.9e-18 95.5 67 73.1
SHI49839 Sapria himalayana HOM05D010923 ORTHO05D003989 1.4e-17 93.2 96 58.3
SHI52555 Sapria himalayana HOM05D000849 ORTHO05D003989 2.1e-16 89.4 59 76.3
SHI53623 Sapria himalayana HOM05D000849 ORTHO05D003989 2.1e-16 89.4 59 76.3
SHI52725 Sapria himalayana HOM05D000849 ORTHO05D003989 3.5e-16 88.6 60 73.3
SHI36761 Sapria himalayana HOM05D010923 ORTHO05D003989 4.6e-16 88.2 67 68.7
SHI51537 Sapria himalayana HOM05D000849 ORTHO05D003989 1.3e-15 86.7 57 75.4
SHI35267 Sapria himalayana HOM05D000849 ORTHO05D001857 1.5e-14 83.2 66 62.1
SHI42703 Sapria himalayana HOM05D000849 ORTHO05D003989 2.4e-12 75.9 87 54.0
SHI01895 Sapria himalayana HOM05D000849 ORTHO05D003989 3.4e-11 72.0 46 71.7
SHI35365 Sapria himalayana HOM05D000849 ORTHO05D003989 3.4e-11 72.0 48 66.7
SHI47843 Sapria himalayana HOM05D000849 ORTHO05D003989 9.9e-11 70.5 98 43.9
SHI54080 Sapria himalayana HOM05D000849 ORTHO05D003989 3.8e-10 68.6 56 62.5
SHI27184 Sapria himalayana HOM05D000849 ORTHO05D003989 1.1e-09 67.0 59 57.6
SHI43902 Sapria himalayana HOM05D010923 ORTHO05D003989 1.4e-09 66.6 42 76.2
SHI44502 Sapria himalayana HOM05D010923 ORTHO05D003989 1.4e-09 66.6 42 76.2
SHI47575 Sapria himalayana HOM05D010923 ORTHO05D003989 1.4e-09 66.6 42 76.2
SHI48148 Sapria himalayana HOM05D010923 ORTHO05D003989 1.4e-09 66.6 42 76.2
FAN28G0398 Fragaria x ananassa HOM05D000849 ORTHO05D003989 3.2e-09 65.5 108 38.9
MD02G1069000 Malus domestica HOM05D000849 ORTHO05D003989 3.2e-09 65.5 108 38.9
RcHm_v2.0_Chr2g0092321 Rosa chinensis HOM05D000849 ORTHO05D003989 3.2e-09 65.5 108 38.9
HPP92_024117 Vanilla planifolia HOM05D000849 ORTHO05D003989 3.2e-09 65.5 71 49.3
FvH4_1g06580 Fragaria vesca HOM05D000849 ORTHO05D003989 4.2e-09 65.1 108 38.0
FAN19G1758 Fragaria x ananassa HOM05D000849 ORTHO05D003989 4.2e-09 65.1 108 38.0
FAN26G0314 Fragaria x ananassa HOM05D000849 ORTHO05D003989 4.2e-09 65.1 108 38.0
FAN26G0318 Fragaria x ananassa HOM05D000849 ORTHO05D003989 4.2e-09 65.1 108 38.0
MBI04_g06989_MAGBIO Magnolia biondii HOM05D000849 ORTHO05D003989 4.2e-09 65.1 108 38.0
Prupe.7G216600 Prunus persica HOM05D000849 ORTHO05D003989 4.2e-09 65.1 108 38.9
Atru.chr7.1508 Acer truncatum HOM05D000849 ORTHO05D003989 5.5e-09 64.7 71 49.3
Ah.09g230330 Amaranthus hybridus HOM05D000849 ORTHO05D003989 5.5e-09 64.7 71 49.3
EL10Ac8g18347 Beta vulgaris HOM05D000849 ORTHO05D003989 5.5e-09 64.7 71 49.3
CAN.G1058.10 Capsicum annuum HOM05D000849 ORTHO05D003989 5.5e-09 64.7 71 49.3
Cpa.g.sc78.44 Carica papaya HOM05D000849 ORTHO05D003989 5.5e-09 64.7 71 49.3
CiPaw.03G221100 Carya illinoinensis HOM05D000849 ORTHO05D003989 5.5e-09 64.7 71 49.3
CiPaw.04G154300 Carya illinoinensis HOM05D000849 ORTHO05D003989 5.5e-09 64.7 71 49.3
CDE05G3423 Ceratophyllum demersum HOM05D000849 ORTHO05D003989 5.5e-09 64.7 71 49.3
AUR62033272 Chenopodium quinoa HOM05D000849 ORTHO05D003989 5.5e-09 64.7 71 49.3
ClCG03G015970 Citrullus lanatus HOM05D000849 ORTHO05D003989 5.5e-09 64.7 71 49.3
Ciclev10009831m.g Citrus clementina HOM05D000849 ORTHO05D003989 5.5e-09 64.7 71 49.3
Haze_25852 Corylus avellana HOM05D000849 ORTHO05D003989 5.5e-09 64.7 71 49.3
MELO3C015429.2 Cucumis melo HOM05D000849 ORTHO05D003989 5.5e-09 64.7 71 49.3
CsaV3_1G039990 Cucumis sativus L. HOM05D000849 ORTHO05D003989 5.5e-09 64.7 71 49.3
Dinv42272 Davidia involucrata HOM05D000849 ORTHO05D003989 5.5e-09 64.7 71 49.3
Duzib150G0327 Durio zibethinus HOM05D000849 ORTHO05D003989 5.5e-09 64.7 71 49.3
Duzib187G0631 Durio zibethinus HOM05D000849 ORTHO05D003989 5.5e-09 64.7 71 49.3
Eucgr.C00951 Eucalyptus grandis HOM05D000849 ORTHO05D003989 5.5e-09 64.7 71 49.3
Gohir.A05G027200 Gossypium hirsutum HOM05D000849 ORTHO05D003989 5.5e-09 64.7 71 49.3
Gohir.A13G194600 Gossypium hirsutum HOM05D000849 ORTHO05D003989 5.5e-09 64.7 71 49.3
Gohir.D05G029100 Gossypium hirsutum HOM05D000849 ORTHO05D003989 5.5e-09 64.7 71 49.3
Gohir.D13G200300 Gossypium hirsutum HOM05D000849 ORTHO05D003989 5.5e-09 64.7 71 49.3
Gorai.013G229100 Gossypium raimondii HOM05D000849 ORTHO05D003989 5.5e-09 64.7 71 49.3
MD15G1200600 Malus domestica HOM05D000849 ORTHO05D003989 5.5e-09 64.7 71 49.3
Manes.16G106500 Manihot esculenta HOM05D000849 ORTHO05D003989 5.5e-09 64.7 71 49.3
Peaxi162Scf00298g00114 Petunia axillaris HOM05D000849 ORTHO05D003989 5.5e-09 64.7 71 49.3
PGR142G0605 Punica granatum HOM05D000849 ORTHO05D003989 5.5e-09 64.7 71 49.3
QL02p086970 Quercus lobata HOM05D000849 ORTHO05D003989 5.5e-09 64.7 71 49.3
Sabra06G0117900 Salix brachista HOM05D000849 ORTHO05D003989 5.5e-09 64.7 71 49.3
Sed0020746 Sechium edule HOM05D000849 ORTHO05D003989 5.5e-09 64.7 71 49.3
Hund26299 Selenicereus undatus HOM05D000849 ORTHO05D003989 5.5e-09 64.7 71 49.3
Sc08g0008140 Simmondsia chinensis HOM05D000849 ORTHO05D003989 5.5e-09 64.7 71 49.3
Thecc.09G096900 Theobroma cacao HOM05D000849 ORTHO05D003989 5.5e-09 64.7 71 49.3
TWI63G0367 Tripterygium wilfordii HOM05D000849 ORTHO05D003989 5.5e-09 64.7 71 49.3
HPP92_009846 Vanilla planifolia HOM05D000849 ORTHO05D003989 5.5e-09 64.7 71 49.3
CDE05G2264 Ceratophyllum demersum HOM05D000849 ORTHO05D003989 7.1e-09 64.3 71 47.9
Manes.03G029400 Manihot esculenta HOM05D000849 ORTHO05D003989 7.1e-09 64.3 71 47.9
Nn8g39010 Nelumbo nucifera HOM05D000849 ORTHO05D003989 7.1e-09 64.3 71 47.9
Potri.006G149100 Populus trichocarpa HOM05D000849 ORTHO05D003989 7.1e-09 64.3 71 47.9
TAR636G1139 Trochodendron aralioides HOM05D000849 ORTHO05D003989 7.1e-09 64.3 71 47.9
BcaB03g16769 Brassica carinata HOM05D000849 ORTHO05D003989 9.3e-09 63.9 108 39.8
BcaC06g36622 Brassica carinata HOM05D000849 ORTHO05D003989 9.3e-09 63.9 108 39.8
A07p00920 Brassica napus HOM05D000849 ORTHO05D003989 9.3e-09 63.9 108 39.8
C07p02080 Brassica napus HOM05D000849 ORTHO05D003989 9.3e-09 63.9 108 39.8
BraA07t27892Z Brassica rapa HOM05D000849 ORTHO05D003989 9.3e-09 63.9 108 39.8
PSO210G0713 Papaver somniferum HOM05D000849 ORTHO05D003989 9.3e-09 63.9 71 46.5
PSO210G7720 Papaver somniferum HOM05D000849 ORTHO05D003989 9.3e-09 63.9 71 46.5
Phvul.002G306700 Phaseolus vulgaris HOM05D000849 ORTHO05D003989 9.3e-09 63.9 72 47.2
VMungo0251G1053 Vigna mungo HOM05D000849 ORTHO05D003989 9.3e-09 63.9 72 47.2
AL3G48440 Arabidopsis lyrata HOM05D000849 ORTHO05D003989 1.2e-08 63.5 71 47.9
AT2G19790 Arabidopsis thaliana HOM05D000849 ORTHO05D003989 1.2e-08 63.5 71 47.9
BcaC04g22820 Brassica carinata HOM05D000849 ORTHO05D003989 1.2e-08 63.5 71 47.9
A09p12580 Brassica napus HOM05D000849 ORTHO05D003989 1.2e-08 63.5 71 47.9
C09p14940 Brassica napus HOM05D000849 ORTHO05D003989 1.2e-08 63.5 71 47.9
BolC7t40613H Brassica oleracea HOM05D000849 ORTHO05D003989 1.2e-08 63.5 71 47.9
BolC9t54396H Brassica oleracea HOM05D000849 ORTHO05D003989 1.2e-08 63.5 71 47.9
BraA09t36905Z Brassica rapa HOM05D000849 ORTHO05D003989 1.2e-08 63.5 71 47.9
Carub.0003s3407 Capsella rubella HOM05D000849 ORTHO05D003989 1.2e-08 63.5 71 47.9
CARHR110250 Cardamine hirsuta HOM05D000849 ORTHO05D003989 1.2e-08 63.5 71 47.9
SHI51484 Sapria himalayana HOM05D000849 ORTHO05D003989 1.2e-08 63.5 65 56.9
Sp3g33140 Schrenkiella parvula HOM05D000849 ORTHO05D003989 1.2e-08 63.5 71 47.9
Aqoxy7G01359 Aquilegia oxysepala HOM05D000849 ORTHO05D003989 1.6e-08 63.2 71 47.9
arahy.Tifrunner.gnm1.ann1.URAI8Z Arachis hypogaea HOM05D000849 ORTHO05D003989 1.6e-08 63.2 108 38.0
arahy.Tifrunner.gnm1.ann1.XR2T8G Arachis hypogaea HOM05D000849 ORTHO05D003989 1.6e-08 63.2 108 38.0
CSS0012070 Camellia sinensis var. sinensis HOM05D000849 ORTHO05D003989 1.6e-08 63.2 71 47.9
Cc06_g10770 Coffea canephora HOM05D000849 ORTHO05D003989 1.6e-08 63.2 71 47.9
ECA236G3815 Erigeron canadensis HOM05D000849 ORTHO05D003989 1.6e-08 63.2 71 47.9
FvH4_5g22770 Fragaria vesca HOM05D000849 ORTHO05D003989 1.6e-08 63.2 108 38.0
FAN08G2450 Fragaria x ananassa HOM05D000849 ORTHO05D003989 1.6e-08 63.2 108 38.0
FAN18G0868 Fragaria x ananassa HOM05D000849 ORTHO05D003989 1.6e-08 63.2 108 38.0
Lsat_1_v5_gn_8_88280 Lactuca sativa HOM05D000849 ORTHO05D003989 1.6e-08 63.2 71 47.9
Nitab4.5_0004180g0010 Nicotiana tabacum HOM05D000849 ORTHO05D003989 1.6e-08 63.2 71 47.9
Rhsim03G0235600 Rhododendron simsii HOM05D000849 ORTHO05D003989 1.6e-08 63.2 71 47.9
vmacro06264 Vaccinium macrocarpon HOM05D000849 ORTHO05D003989 1.6e-08 63.2 71 47.9
Aqoxy7G03958 Aquilegia oxysepala HOM05D000849 ORTHO05D003989 2.1e-08 62.8 71 46.5
MSTRG.19541 Avicennia marina HOM05D000849 ORTHO05D003989 2.1e-08 62.8 71 46.5
DCAR_028635 Daucus carota HOM05D000849 ORTHO05D003989 2.1e-08 62.8 83 43.4
Migut.K00562 Erythranthe guttata HOM05D000849 ORTHO05D003989 2.1e-08 62.8 71 46.5
Glyma.01G005300 Glycine max HOM05D000849 ORTHO05D003989 2.1e-08 62.8 71 47.9
Glyma.07G126300 Glycine max HOM05D000849 ORTHO05D003989 2.1e-08 62.8 71 47.9
Lalb_Chr14g0375221 Lupinus albus HOM05D000849 ORTHO05D003989 2.1e-08 62.8 71 47.9
Oeu036246.1 Olea europaea HOM05D000849 ORTHO05D003989 2.1e-08 62.8 71 46.5
Os08g0395300 Oryza sativa ssp. japonica HOM05D000849 ORTHO05D003989 2.1e-08 62.8 71 46.5
Os10g0368400 Oryza sativa ssp. japonica HOM05D000849 ORTHO05D003989 2.1e-08 62.8 71 46.5
PSO063G4962 Papaver somniferum HOM05D000849 ORTHO05D003989 2.1e-08 62.8 71 45.1
PSO782G5042 Papaver somniferum HOM05D000849 ORTHO05D003989 2.1e-08 62.8 71 45.1
Phvul.004G173800 Phaseolus vulgaris HOM05D000849 ORTHO05D003989 2.1e-08 62.8 71 47.9
unitig_26.g9704 Utricularia gibba HOM05D000849 ORTHO05D003989 2.1e-08 62.8 71 46.5
VMungo0464G2126 Vigna mungo HOM05D000849 ORTHO05D003989 2.1e-08 62.8 71 47.9
Gorai.009G029200 Gossypium raimondii HOM05D000849 ORTHO05D003989 2.7e-08 62.4 71 47.9
SGA_v2.0_scaffold279G46782 Striga asiatica HOM05D000849 ORTHO05D003989 2.7e-08 62.4 71 45.1
SGA_v2.0_scaffold302G47808 Striga asiatica HOM05D000849 ORTHO05D003989 2.7e-08 62.4 71 45.1
Actinidia17501 Actinidia chinensis HOM05D000849 ORTHO05D003989 3.5e-08 62.0 71 47.9
Aa31LG8G16770 Aethionema arabicum HOM05D000849 ORTHO05D003989 3.5e-08 62.0 71 46.5
ATR0705G079 Amborella trichopoda HOM05D000849 ORTHO05D003989 3.5e-08 62.0 71 46.5
Lj2g0010400 Lotus japonicus HOM05D000849 ORTHO05D003989 3.5e-08 62.0 108 37.0
Mapoly0016s0005 Marchantia polymorpha HOM05D000849 ORTHO05D003989 3.5e-08 62.0 71 46.5
SEGI_24636 Sequoiadendron giganteum HOM05D000849 ORTHO05D003989 4.6e-08 61.6 71 45.1
THA.LOC104814582 Tarenaya hassleriana HOM05D000849 ORTHO05D003989 4.6e-08 61.6 71 47.9
THA.LOC104820037 Tarenaya hassleriana HOM05D000849 ORTHO05D003989 6.0e-08 61.2 71 46.5
HanXRQChr09g0238561 Helianthus annuus HOM05D000849 ORTHO05D003989 7.9e-08 60.8 71 46.5
Solyc05g026130.3 Solanum lycopersicum HOM05D000849 ORTHO05D003989 7.9e-08 60.8 71 46.5
Sopen05g022340 Solanum pennellii HOM05D000849 ORTHO05D003989 7.9e-08 60.8 71 46.5
PGSC0003DMG400028942 Solanum tuberosum HOM05D000849 ORTHO05D003989 7.9e-08 60.8 71 46.5
Zm00001eb178620 Zea mays HOM05D000849 ORTHO05D003989 7.9e-08 60.8 71 45.1
PSO832G0835 Papaver somniferum HOM05D000849 ORTHO05D003989 1.0e-07 60.5 71 43.7
Lj4g0006741 Lotus japonicus HOM05D000849 ORTHO05D003989 1.3e-07 60.1 71 46.5
Pp3c14_14670 Physcomitrium patens HOM05D000849 ORTHO05D003989 1.3e-07 60.1 108 36.1
GSVIVG01015270001 Vitis vinifera HOM05D000849 ORTHO05D003989 1.3e-07 60.1 71 46.5
Hma1.2p1_0663F.1_g198540 Hydrangea macrophylla HOM05D000849 ORTHO05D003989 1.8e-07 59.7 83 41.0
CBR_g2797 Chara braunii HOM05D000849 ORTHO05D003989 3.0e-07 58.9 71 45.1
Ca_17379_v3 Cicer arietinum L. HOM05D000849 ORTHO05D003989 3.0e-07 58.9 71 45.1
Medtr7g100010 Medicago truncatula HOM05D000849 ORTHO05D003989 3.0e-07 58.9 71 45.1
Medtr8g102180 Medicago truncatula HOM05D000849 ORTHO05D003989 3.0e-07 58.9 71 45.1
Psat7g018560 Pisum sativum HOM05D000849 ORTHO05D003989 3.0e-07 58.9 71 45.1
PGR102G1239 Punica granatum HOM05D000849 ORTHO05D003989 3.0e-07 58.9 71 45.1
SHI53541 Sapria himalayana HOM05D000849 ORTHO05D003989 3.0e-07 58.9 43 67.4
SHI53653 Sapria himalayana HOM05D000849 ORTHO05D003989 3.0e-07 58.9 43 67.4
TPR.G34776 Trifolium pratense HOM05D000849 ORTHO05D003989 3.0e-07 58.9 71 45.1
SHI33029 Sapria himalayana HOM05D000849 ORTHO05D003989 3.9e-07 58.5 35 77.1
SMO196G0114 Selaginella moellendorffii HOM05D000849 ORTHO05D003989 6.7e-07 57.8 71 40.8
MSTRG.6030 Avicennia marina HOM05D000849 ORTHO05D003989 8.7e-07 57.4 71 40.8
SHI50198 Sapria himalayana HOM05D000849 ORTHO05D003989 1.1e-06 57.0 37 73.0
SHI38667 Sapria himalayana HOM05D000849 ORTHO05D003989 1.5e-06 56.6 39 69.2
SHI52623 Sapria himalayana HOM05D000849 ORTHO05D003989 4.3e-06 55.1 36 75.0
Thhalv10002117m.g Eutrema salsugineum HOM05D000849 ORTHO05D003989 7.4e-06 54.3 66 45.5


User provided reference genes

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