Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI40017 Sapria himalayana HOM05D000616 ORTHO05D000062 2.4e-50 201.8 100 100.0
SHI38595 Sapria himalayana HOM05D000107 ORTHO05D000062 1.5e-39 166.0 84 96.4
SHI38731 Sapria himalayana HOM05D000107 ORTHO05D000062 1.5e-39 166.0 84 96.4
SHI04868 Sapria himalayana HOM05D000107 ORTHO05D000062 8.1e-38 160.2 92 83.7
SHI28504 Sapria himalayana HOM05D000107 ORTHO05D000062 3.1e-37 158.3 92 84.8
SHI15542 Sapria himalayana HOM05D000107 ORTHO05D000062 7.6e-36 153.7 95 82.1
SHI38281 Sapria himalayana HOM05D000616 ORTHO05D000062 7.6e-36 153.7 90 83.3
SHI10257 Sapria himalayana HOM05D000616 ORTHO05D000062 2.2e-35 152.1 92 83.7
SHI31605 Sapria himalayana HOM05D000107 ORTHO05D000062 4.9e-35 151.0 119 67.2
SHI45014 Sapria himalayana HOM05D000616 ORTHO05D000062 6.4e-35 150.6 107 74.8
SHI27621 Sapria himalayana HOM05D000616 ORTHO05D000062 7.1e-34 147.1 84 84.5
SHI34103 Sapria himalayana HOM05D000616 ORTHO05D000062 2.7e-33 145.2 91 80.2
SHI13259 Sapria himalayana HOM05D000107 ORTHO05D000062 6.0e-33 144.1 92 79.3
SHI21897 Sapria himalayana HOM05D000107 ORTHO05D000062 6.0e-33 144.1 92 81.5
SHI26971 Sapria himalayana HOM05D000107 ORTHO05D000062 7.8e-33 143.7 91 81.3
SHI02429 Sapria himalayana HOM05D000107 ORTHO05D000062 1.3e-32 142.9 85 81.2
SHI40386 Sapria himalayana HOM05D000616 ORTHO05D000062 5.1e-32 141.0 107 69.2
SHI17705 Sapria himalayana HOM05D000107 ORTHO05D000062 6.6e-32 140.6 79 84.8
SHI20715 Sapria himalayana HOM05D000616 ORTHO05D000062 1.1e-31 139.8 114 64.9
SHI10730 Sapria himalayana HOM05D000107 ORTHO05D000062 1.5e-31 139.4 115 67.0
SHI17684 Sapria himalayana HOM05D000107 ORTHO05D000062 2.5e-31 138.7 79 84.8
SHI19528 Sapria himalayana HOM05D000616 ORTHO05D000233 1.3e-30 136.3 84 81.0
SHI28371 Sapria himalayana HOM05D000616 ORTHO05D000233 1.3e-30 136.3 90 78.9
SHI35924 Sapria himalayana HOM05D000107 ORTHO05D000062 4.8e-30 134.4 107 67.3
SHI36328 Sapria himalayana HOM05D000107 ORTHO05D000062 4.8e-30 134.4 84 81.0
SHI38964 Sapria himalayana HOM05D000616 ORTHO05D000233 4.8e-30 134.4 74 89.2
SHI41979 Sapria himalayana HOM05D000616 ORTHO05D000062 6.2e-30 134.0 74 87.8
SHI36792 Sapria himalayana HOM05D000616 ORTHO05D000062 1.8e-29 132.5 73 87.7
SHI38688 Sapria himalayana HOM05D000107 ORTHO05D000062 1.8e-29 132.5 84 79.8
SHI38523 Sapria himalayana HOM05D000616 ORTHO05D000062 2.4e-29 132.1 106 67.0
SHI40917 Sapria himalayana HOM05D000616 ORTHO05D000233 2.4e-29 132.1 111 65.8
SHI41059 Sapria himalayana HOM05D000616 ORTHO05D000233 2.4e-29 132.1 111 65.8
SHI43358 Sapria himalayana HOM05D000616 ORTHO05D000062 3.1e-29 131.7 88 77.3
SHI20636 Sapria himalayana HOM05D000107 ORTHO05D000062 4.0e-29 131.3 91 74.7
SHI25389 Sapria himalayana HOM05D000616 ORTHO05D000233 4.0e-29 131.3 74 85.1
SHI29380 Sapria himalayana HOM05D000107 ORTHO05D000062 4.0e-29 131.3 78 82.1
SHI13150 Sapria himalayana HOM05D000616 ORTHO05D000233 6.9e-29 130.6 74 86.5
SHI03410 Sapria himalayana HOM05D000107 ORTHO05D000062 9.0e-29 130.2 80 80.0
SHI01501 Sapria himalayana HOM05D000616 ORTHO05D000062 1.5e-28 129.4 74 85.1
SHI20985 Sapria himalayana HOM05D000616 ORTHO05D000233 2.6e-28 128.6 74 86.5
SHI39691 Sapria himalayana HOM05D000616 ORTHO05D000062 2.6e-28 128.6 94 75.5
SHI40406 Sapria himalayana HOM05D000616 ORTHO05D000062 4.4e-28 127.9 73 86.3
SHI33425 Sapria himalayana HOM05D000616 ORTHO05D000062 5.8e-28 127.5 74 85.1
SHI38771 Sapria himalayana HOM05D000616 ORTHO05D000233 5.8e-28 127.5 73 84.9
SHI03527 Sapria himalayana HOM05D000616 ORTHO05D000233 7.6e-28 127.1 74 83.8
SHI35572 Sapria himalayana HOM05D000107 ORTHO05D000062 1.3e-27 126.3 73 86.3
SHI00934 Sapria himalayana HOM05D000616 ORTHO05D000062 1.7e-27 125.9 92 71.7
SHI34576 Sapria himalayana HOM05D000616 ORTHO05D000062 1.7e-27 125.9 75 81.3
SHI09961 Sapria himalayana HOM05D000107 ORTHO05D000062 2.9e-27 125.2 75 81.3
SHI21757 Sapria himalayana HOM05D000616 ORTHO05D000062 2.9e-27 125.2 74 83.8
SHI39577 Sapria himalayana HOM05D000616 ORTHO05D000233 2.9e-27 125.2 73 84.9
SHI44094 Sapria himalayana HOM05D000616 ORTHO05D000233 2.9e-27 125.2 88 70.5
SHI15229 Sapria himalayana HOM05D000616 ORTHO05D000062 3.8e-27 124.8 74 83.8
SHI06253 Sapria himalayana HOM05D000616 ORTHO05D000062 6.4e-27 124.0 74 82.4
SHI01311 Sapria himalayana HOM05D000616 ORTHO05D000233 8.4e-27 123.6 73 83.6
SHI17454 Sapria himalayana HOM05D000616 ORTHO05D000233 8.4e-27 123.6 74 82.4
SHI01215 Sapria himalayana HOM05D000616 ORTHO05D000062 1.1e-26 123.2 79 78.5
SHI15693 Sapria himalayana HOM05D000616 ORTHO05D000233 1.4e-26 122.9 74 83.8
SHI19623 Sapria himalayana HOM05D000107 ORTHO05D000062 1.4e-26 122.9 74 83.8
SHI37659 Sapria himalayana HOM05D000107 ORTHO05D000062 1.9e-26 122.5 73 83.6
SHI46859 Sapria himalayana HOM05D000107 ORTHO05D000062 1.9e-26 122.5 72 83.3
SHI04558 Sapria himalayana HOM05D000616 ORTHO05D000062 2.4e-26 122.1 88 73.9
SHI14345 Sapria himalayana HOM05D000616 ORTHO05D000233 3.2e-26 121.7 84 75.0
SHI28668 Sapria himalayana HOM05D000107 ORTHO05D000062 5.4e-26 120.9 74 79.7
SHI19642 Sapria himalayana HOM05D000616 ORTHO05D000233 9.3e-26 120.2 80 76.2
SHI09358 Sapria himalayana HOM05D000107 ORTHO05D000062 1.6e-25 119.4 76 78.9
SHI33835 Sapria himalayana HOM05D000616 ORTHO05D000233 1.6e-25 119.4 66 84.8
SHI00835 Sapria himalayana HOM05D000616 ORTHO05D000233 2.1e-25 119.0 71 78.9
SHI27562 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-25 119.0 73 79.5
SHI23525 Sapria himalayana HOM05D000616 ORTHO05D000062 2.7e-25 118.6 90 70.0
SHI23010 Sapria himalayana HOM05D000616 ORTHO05D000233 3.5e-25 118.2 66 86.4
SHI17407 Sapria himalayana HOM05D000616 ORTHO05D000233 6.0e-25 117.5 74 78.4
SHI23683 Sapria himalayana HOM05D000616 ORTHO05D000062 6.0e-25 117.5 110 60.9
SHI40722 Sapria himalayana HOM05D000616 ORTHO05D000233 7.8e-25 117.1 90 68.9
SHI34152 Sapria himalayana HOM05D000616 ORTHO05D000233 1.0e-24 116.7 85 71.8
SHI03621 Sapria himalayana HOM05D000616 ORTHO05D000233 5.1e-24 114.4 65 84.6
SHI07773 Sapria himalayana HOM05D000616 ORTHO05D000233 5.1e-24 114.4 66 83.3
SHI17348 Sapria himalayana HOM05D000616 ORTHO05D000062 1.1e-23 113.2 80 75.0
SHI23934 Sapria himalayana HOM05D000616 ORTHO05D000233 1.5e-23 112.8 66 84.8
SHI20013 Sapria himalayana HOM05D000616 ORTHO05D000233 1.9e-23 112.5 75 77.3
SHI38186 Sapria himalayana HOM05D000616 ORTHO05D000233 6.2e-22 107.5 74 75.7
SHI36407 Sapria himalayana HOM05D000107 ORTHO05D000062 8.1e-22 107.1 83 68.7
SHI12064 Sapria himalayana HOM05D000616 ORTHO05D000062 1.1e-21 106.7 58 87.9
SHI14858 Sapria himalayana HOM05D000616 ORTHO05D000233 1.7e-19 99.4 65 76.9
SHI35874 Sapria himalayana HOM05D000107 ORTHO05D000062 3.8e-19 98.2 63 77.8
SHI35916 Sapria himalayana HOM05D000616 ORTHO05D000062 4.9e-19 97.8 57 80.7
SHI12065 Sapria himalayana HOM05D000616 ORTHO05D000062 6.4e-19 97.4 84 61.9
SHI23186 Sapria himalayana HOM05D000107 ORTHO05D000062 3.2e-18 95.1 57 80.7
SHI41664 Sapria himalayana HOM05D000107 ORTHO05D000062 3.2e-18 95.1 63 77.8
SHI39976 Sapria himalayana HOM05D000616 ORTHO05D000062 5.4e-18 94.4 46 97.8
SHI37996 Sapria himalayana HOM05D000107 ORTHO05D000062 2.7e-17 92.0 60 76.7
SHI30150 Sapria himalayana HOM05D000107 ORTHO05D000062 1.3e-16 89.7 74 64.9
SHI38611 Sapria himalayana HOM05D000616 ORTHO05D000233 1.8e-16 89.4 65 70.8
SHI10722 Sapria himalayana HOM05D000107 ORTHO05D000062 6.7e-16 87.4 62 72.6
SHI31892 Sapria himalayana HOM05D000107 ORTHO05D000062 3.3e-15 85.1 47 87.2
SHI34318 Sapria himalayana HOM05D000616 ORTHO05D000062 1.7e-11 72.8 66 59.1
Hma1.2p1_0143F.1_g064520 Hydrangea macrophylla HOM05D000107 ORTHO05D000062 8.4e-11 70.5 56 60.7
Hma1.2p1_1855F.1_g305410 Hydrangea macrophylla HOM05D000107 ORTHO05D000062 8.4e-11 70.5 56 60.7
RhsimUnG0218400 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.9e-10 69.3 74 52.7
Atru.chr3.1502 Acer truncatum HOM05D000107 ORTHO05D000062 3.2e-10 68.6 72 45.8
Atru.chr6.157 Acer truncatum HOM05D000107 ORTHO05D000062 3.2e-10 68.6 74 45.9
Rhsim09G0096400 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.2e-10 68.6 74 50.0
RcHm_v2.0_Chr7g0231571 Rosa chinensis HOM05D000107 ORTHO05D000062 3.2e-10 68.6 81 40.7
CSS0026465 Camellia sinensis var. sinensis HOM05D000539 ORTHO05D000233 4.2e-10 68.2 66 51.5
RcHm_v2.0_Chr5g0066161 Rosa chinensis HOM05D000107 ORTHO05D000062 2.1e-09 65.9 74 41.9
SHI15545 Sapria himalayana HOM05D000616 ORTHO05D000062 2.1e-09 65.9 48 72.9
PSO541G0665 Papaver somniferum HOM05D000107 ORTHO05D000062 2.7e-09 65.5 59 54.2
Rhsim07G0107900 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.5e-09 65.1 55 56.4
Rhsim10G0157200 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.5e-09 65.1 55 56.4
PSO170G6916 Papaver somniferum HOM05D000107 ORTHO05D000062 4.6e-09 64.7 61 52.5
Rhsim01G0018900 Rhododendron simsii HOM05D000539 ORTHO05D000233 4.6e-09 64.7 55 52.7
RcHm_v2.0_Chr6g0264621 Rosa chinensis HOM05D000107 ORTHO05D000062 4.6e-09 64.7 73 42.5
SHI07716 Sapria himalayana HOM05D000616 ORTHO05D000062 4.6e-09 64.7 92 44.6
Atru.chr13.1908 Acer truncatum HOM05D000107 ORTHO05D000062 7.9e-09 63.9 47 61.7
CANSAT01G1098 Cannabis sativa HOM05D000107 ORTHO05D000062 1.8e-08 62.8 55 54.5
RcHm_v2.0_Chr2g0114991 Rosa chinensis HOM05D000107 ORTHO05D000062 1.8e-08 62.8 79 31.6
CANSAT21G0779 Cannabis sativa HOM05D000107 ORTHO05D000062 5.1e-08 61.2 66 45.5
CANSAT21G2308 Cannabis sativa HOM05D000107 ORTHO05D000062 5.1e-08 61.2 62 45.2
MELO3C033323.2 Cucumis melo HOM05D000616 ORTHO05D000233 5.1e-08 61.2 94 35.1
RcHm_v2.0_Chr4g0414221 Rosa chinensis HOM05D000107 ORTHO05D000062 5.1e-08 61.2 83 30.1
Aqoxy3G01844 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 6.7e-08 60.8 56 53.6
RhsimUnG0147700 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.7e-08 60.5 59 50.8
RcHm_v2.0_Chr5g0071731 Rosa chinensis HOM05D000107 ORTHO05D000062 1.1e-07 60.1 79 36.7
CANSAT01G1520 Cannabis sativa HOM05D000107 ORTHO05D000062 1.5e-07 59.7 60 41.7
CANSAT35G0966 Cannabis sativa HOM05D000107 ORTHO05D000062 1.5e-07 59.7 68 41.2
CANSAT54G1396 Cannabis sativa HOM05D000107 ORTHO05D000062 1.5e-07 59.7 60 41.7
CANSAT54G0813 Cannabis sativa HOM05D000107 ORTHO05D000062 1.9e-07 59.3 69 43.5
CANSAT64G1456 Cannabis sativa HOM05D000107 ORTHO05D000062 1.9e-07 59.3 63 42.9
ClCG07G007560 Citrullus lanatus HOM05D000107 ORTHO05D000062 1.9e-07 59.3 65 41.5
PSO104G0066 Papaver somniferum HOM05D000107 ORTHO05D000062 1.9e-07 59.3 63 49.2
Ca_02225_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 2.5e-07 58.9 43 60.5
Ca_03083_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 2.5e-07 58.9 43 60.5
Ca_06851_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 2.5e-07 58.9 43 60.5
Ca_12218_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 2.5e-07 58.9 43 60.5
Ca_19978_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 2.5e-07 58.9 43 60.5
Ca_23983_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 2.5e-07 58.9 43 60.5
Ca_27082_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 2.5e-07 58.9 43 60.5
Ca_27182_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 2.5e-07 58.9 43 60.5
SHI27015 Sapria himalayana HOM05D000107 ORTHO05D000062 2.5e-07 58.9 92 42.4
CSS0023486 Camellia sinensis var. sinensis HOM05D000616 ORTHO05D000233 4.3e-07 58.2 66 47.0
Os01g0768600 Oryza sativa ssp. japonica HOM05D000107 ORTHO05D000062 4.3e-07 58.2 97 36.1
PSO781G0158 Papaver somniferum HOM05D000107 ORTHO05D000062 5.7e-07 57.8 71 40.8
Os12g0544600 Oryza sativa ssp. japonica HOM05D000107 ORTHO05D000062 7.4e-07 57.4 97 36.1
CANSAT80G0240 Cannabis sativa HOM05D000107 ORTHO05D000062 9.6e-07 57.0 63 41.3
Ca_02458_v3 Cicer arietinum L. HOM05D000006 ORTHO05D000001 9.6e-07 57.0 43 58.1
Ca_13991_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 9.6e-07 57.0 59 47.5
HanXRQChr13g0403301 Helianthus annuus HOM05D000107 ORTHO05D000062 9.6e-07 57.0 76 43.4
Ca_27711_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.3e-06 56.6 43 58.1
Ca_24298_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.6e-06 56.2 43 55.8
FvH4_4g05702 Fragaria vesca HOM05D000107 ORTHO05D000062 1.6e-06 56.2 74 35.1
EL10Ac2g03395 Beta vulgaris HOM05D007123 ORTHO05D000233 2.1e-06 55.8 67 46.3
EL10Ac4g08101 Beta vulgaris HOM05D000107 ORTHO05D000062 2.1e-06 55.8 67 46.3
Ca_06534_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 2.1e-06 55.8 56 48.2
ECA232G4117 Erigeron canadensis HOM05D000006 ORTHO05D000091 2.1e-06 55.8 41 61.0
HanXRQChr05g0158791 Helianthus annuus HOM05D000107 ORTHO05D000062 2.1e-06 55.8 76 42.1
TPR.G9027 Trifolium pratense HOM05D000107 ORTHO05D000062 2.8e-06 55.5 80 40.0
Ca_19797_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000224 4.8e-06 54.7 43 55.8
Ca_20719_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 4.8e-06 54.7 43 55.8
ECA236G2777 Erigeron canadensis HOM05D000006 ORTHO05D000062 4.8e-06 54.7 40 62.5
Ca_20279_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 6.2e-06 54.3 43 55.8
PSO566G0169 Papaver somniferum HOM05D000107 ORTHO05D000062 6.2e-06 54.3 71 39.4
RcHm_v2.0_Chr2g0095191 Rosa chinensis HOM05D000107 ORTHO05D000062 6.2e-06 54.3 55 43.6
AUR62041178 Chenopodium quinoa HOM05D000107 ORTHO05D000062 8.2e-06 53.9 60 43.3
Ca_13692_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 8.2e-06 53.9 43 55.8
SHI46204 Sapria himalayana HOM05D000616 ORTHO05D000233 8.2e-06 53.9 46 58.7
TAR266G0002 Trochodendron aralioides HOM05D000107 ORTHO05D000062 8.2e-06 53.9 49 49.0


User provided reference genes

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